Cow genome map


           Conread name:
           rlnt35c_a20.y1
        

               Conread position:
               97-256
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               42, 53
               

               Conread position:
               104-244
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 7
               

               Conread position:
               104-260
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               96, 18
               

               Conread position:
               106-246
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               7, 45
               

               Conread position:
               110-224
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               110-226
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 50
               

               Conread position:
               110-230
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               110-238
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               93, 34
               

               Conread position:
               110-241
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 70
               

               Conread position:
               110-248
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               21, 43
               

               Conread position:
               111-226
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               9, 25
               

               Conread position:
               111-249
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               5, 34
               

               Conread position:
               112-249
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               114-232
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               115-224
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               95
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               115-261
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               85, 29
               

               Conread position:
               117-227
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               80, 27
               

               Conread position:
               117-230
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               8, 18
               

               Conread position:
               117-238
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               83, 31
               

               Conread position:
               117-238
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               117-262
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               78, 45
               

               Conread position:
               119-225
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               81, 25
               

               Conread position:
               119-225
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               119-226
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               119-227
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               119-227
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               119-230
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               119-230
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               119-231
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               74, 25
               

               Conread position:
               119-231
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               119-237
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               75, 25
               

               Conread position:
               119-239
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               119-241
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               6, 42
               

               Conread position:
               119-241
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               6, 26
               

               Conread position:
               119-243
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 26
               

               Conread position:
               119-245
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               119-246
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               74, 25
               

               Conread position:
               119-246
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               80, 26
               

               Conread position:
               119-246
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 118
               

               Conread position:
               119-250
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               76, 54
               

               Conread position:
               119-252
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               119-254
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               119-259
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               81, 26
               

               Conread position:
               119-259
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               119-263
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               81, 25
               

               Conread position:
               120-234
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               28, 15
               

               Conread position:
               120-241
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               120-244
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               83, 29
               

               Conread position:
               120-245
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               116, 11
               

               Conread position:
               120-254
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               39, 120
               

               Conread position:
               120-260
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               121-261
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 113
               

               Conread position:
               122-226
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               124-243
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               80, 13
               

               Conread position:
               124-256
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               124-263
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 20
               

               Conread position:
               125-259
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               130-251
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               29, 106
               

               Conread position:
               132-230
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               140-236
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               146-257
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               150-247
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               48, 0
               
Show alignments to all cow chromosomes.