Cow genome map


           Conread name:
           rlnt35c_a20.y1
        

               Conread position:
               108-227
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               26, 15
               

               Conread position:
               110-227
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               89, 34
               

               Conread position:
               110-230
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               90, 49
               

               Conread position:
               110-230
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               28, 57
               

               Conread position:
               110-236
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               110-244
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               90, 34
               

               Conread position:
               110-249
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 21
               

               Conread position:
               110-252
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               90, 115
               

               Conread position:
               110-258
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               90, 25
               

               Conread position:
               111-253
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               112-250
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               116-253
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               5, 29
               

               Conread position:
               117-230
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               117-230
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               117-246
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               82, 27
               

               Conread position:
               119-221
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               119-225
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               119-227
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               78, 26
               

               Conread position:
               119-229
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               119-230
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               119-230
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               119-230
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               45, 24
               

               Conread position:
               119-236
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               79, 12
               

               Conread position:
               119-244
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 25
               

               Conread position:
               119-249
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               28, 108
               

               Conread position:
               119-251
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               84, 25
               

               Conread position:
               119-252
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               119-253
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               28, 110
               

               Conread position:
               119-254
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 26
               

               Conread position:
               119-254
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               119-262
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               80, 25
               

               Conread position:
               119-263
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 25
               

               Conread position:
               120-231
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               103, 11
               

               Conread position:
               120-246
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               120-247
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               78, 25
               

               Conread position:
               120-248
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               75, 23
               

               Conread position:
               120-249
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               25, 114
               

               Conread position:
               120-249
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               18, 78
               

               Conread position:
               121-230
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               78, 24
               

               Conread position:
               121-261
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               122-252
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 30
               

               Conread position:
               124-260
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               130-227
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               131-230
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               66, 13
               

               Conread position:
               131-231
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               136-230
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               86
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               137-263
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 95
               

               Conread position:
               139-248
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 84
               

               Conread position:
               140-253
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               140-263
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 89
               

               Conread position:
               149-250
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               49, 0
               
Show alignments to all cow chromosomes.