Cow genome map
| Conread name: | rmas920b_n5.y1 |
| Conread position: | 231-380 |
| Cow position: | chr10:36512577-36512426 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 231-382 |
| Cow position: | chr10:32828638-32828487 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-383 |
| Cow position: | chr10:6556299-6556147 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-383 |
| Cow position: | chr10:20374799-20374951 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-422 |
| Cow position: | chr10:6535485-6535295 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 231-430 |
| Cow position: | chr10:34665974-34666179 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 231-443 |
| Cow position: | chr10:40150432-40150646 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 131, 20 |
| Conread position: | 231-447 |
| Cow position: | chr10:25339862-25339631 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 231-456 |
| Cow position: | chr10:41150969-41151209 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 155, 69 |
| Conread position: | 231-471 |
| Cow position: | chr10:22346725-22346470 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 142, 92 |
| Conread position: | 231-471 |
| Cow position: | chr10:32702522-32702267 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 151, 246 |
| Conread position: | 231-471 |
| Cow position: | chr10:41159179-41158924 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 128, 244 |
| Conread position: | 231-482 |
| Cow position: | chr10:7896715-7896985 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 231-482 |
| Cow position: | chr10:8291809-8291544 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 151, 33 |
| Conread position: | 231-482 |
| Cow position: | chr10:10172501-10172232 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 231-482 |
| Cow position: | chr10:25651663-25651932 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-482 |
| Cow position: | chr10:29631029-29631301 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 121, 78 |
| Conread position: | 231-482 |
| Cow position: | chr10:33871051-33870782 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 231-482 |
| Cow position: | chr10:39814633-39814901 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 151, 80 |
| Conread position: | 231-482 |
| Cow position: | chr10:41568867-41568598 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 231-482 |
| Cow position: | chr10:44707851-44708114 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 153, 26 |
| Conread position: | 231-482 |
| Cow position: | chr10:57555569-57555838 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-483 |
| Cow position: | chr10:38544128-38544394 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 126, 41 |
| Conread position: | 231-483 |
| Cow position: | chr10:41878690-41878420 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 231-484 |
| Cow position: | chr10:1379262-1378991 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 231-484 |
| Cow position: | chr10:2119245-2119510 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 142, 232 |
| Conread position: | 231-484 |
| Cow position: | chr10:7280339-7280615 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-484 |
| Cow position: | chr10:14334080-14334339 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 99, 184 |
| Conread position: | 231-484 |
| Cow position: | chr10:20369344-20369604 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 30, 237 |
| Conread position: | 231-484 |
| Cow position: | chr10:22102999-22102732 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 133, 180 |
| Conread position: | 231-484 |
| Cow position: | chr10:22644764-22644496 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 14, 95 |
| Conread position: | 231-484 |
| Cow position: | chr10:29109219-29109491 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 209 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 15, 114 |
| Conread position: | 231-484 |
| Cow position: | chr10:30683725-30683997 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 231-484 |
| Cow position: | chr10:37771650-37771380 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 231-484 |
| Cow position: | chr10:39039550-39039803 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 151, 214 |
| Conread position: | 231-484 |
| Cow position: | chr10:39439918-39439647 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-484 |
| Cow position: | chr10:39778366-39778626 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 139, 14 |
| Conread position: | 231-484 |
| Cow position: | chr10:54930449-54930714 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 151, 234 |
| Conread position: | 231-484 |
| Cow position: | chr10:57988230-57988499 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 232-442 |
| Cow position: | chr10:38850031-38849808 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 22 |
| Conread position: | 232-470 |
| Cow position: | chr10:16927434-16927180 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 150, 239 |
| Conread position: | 232-483 |
| Cow position: | chr10:29844894-29845155 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 150, 203 |
| Conread position: | 232-484 |
| Cow position: | chr10:11822513-11822244 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 73, 68 |
| Conread position: | 232-484 |
| Cow position: | chr10:51781676-51781917 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 122, 133 |
| Conread position: | 232-484 |
| Cow position: | chr10:62407017-62407282 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 150, 233 |
| Conread position: | 233-448 |
| Cow position: | chr10:19142853-19143083 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 149, 63 |
| Conread position: | 233-471 |
| Cow position: | chr10:23409486-23409728 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 157, 233 |
| Conread position: | 234-484 |
| Cow position: | chr10:38343605-38343862 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 150, 227 |
| Conread position: | 235-482 |
| Cow position: | chr10:28255646-28255919 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 76 |
| Conread position: | 235-484 |
| Cow position: | chr10:21488718-21488453 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 236-423 |
| Cow position: | chr10:22619327-22619513 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 148, 25 |
| Conread position: | 236-483 |
| Cow position: | chr10:41635149-41634902 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 141, 196 |
| Conread position: | 237-484 |
| Cow position: | chr10:46196801-46196553 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 124, 93 |
| Conread position: | 239-403 |
| Cow position: | chr10:20515186-20515022 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 158, 53 |
| Conread position: | 242-380 |
| Cow position: | chr10:24295602-24295741 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 104, 72 |
| Conread position: | 242-466 |
| Cow position: | chr10:8325359-8325587 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 244-471 |
| Cow position: | chr10:47788427-47788187 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 254-470 |
| Cow position: | chr10:47908676-47908452 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 11 |
| Conread position: | 271-388 |
| Cow position: | chr10:1664847-1664964 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 278-431 |
| Cow position: | chr10:14863510-14863351 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 291-484 |
| Cow position: | chr10:20382329-20382535 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 85, 141 |
| Conread position: | 293-482 |
| Cow position: | chr10:17434067-17433864 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 295-483 |
| Cow position: | chr10:21517286-21517480 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 300-482 |
| Cow position: | chr10:53320706-53320896 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 97, 164 |
| Conread position: | 381-484 |
| Cow position: | chr10:50136167-50136063 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 85 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
Show alignments to all cow chromosomes.