Cow genome map
| Conread name: | rmas920b_n5.y1 |
| Conread position: | 231-371 |
| Cow position: | chr12:21427900-21428040 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-385 |
| Cow position: | chr12:33043054-33042899 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 231-388 |
| Cow position: | chr12:15950114-15950271 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-446 |
| Cow position: | chr12:20461537-20461768 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-451 |
| Cow position: | chr12:43913531-43913295 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 231-470 |
| Cow position: | chr12:8676397-8676654 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 231-482 |
| Cow position: | chr12:1887866-1888135 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 231-482 |
| Cow position: | chr12:3362627-3362365 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 153, 95 |
| Conread position: | 231-482 |
| Cow position: | chr12:21210356-21210088 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 159, 16 |
| Conread position: | 231-482 |
| Cow position: | chr12:21429701-21429432 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 231-482 |
| Cow position: | chr12:24994270-24994539 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-482 |
| Cow position: | chr12:42606558-42606824 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 151, 224 |
| Conread position: | 231-483 |
| Cow position: | chr12:1776272-1776536 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 7, 118 |
| Conread position: | 231-483 |
| Cow position: | chr12:17967504-17967235 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 100, 14 |
| Conread position: | 231-483 |
| Cow position: | chr12:27854272-27854540 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 231-484 |
| Cow position: | chr12:6404946-6405214 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 231-484 |
| Cow position: | chr12:22204019-22204290 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 231-484 |
| Cow position: | chr12:30685426-30685171 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 156, 45 |
| Conread position: | 231-484 |
| Cow position: | chr12:35346223-35345959 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 155, 240 |
| Conread position: | 231-484 |
| Cow position: | chr12:42857841-42858114 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-484 |
| Cow position: | chr12:48471194-48471462 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 232-385 |
| Cow position: | chr12:25261829-25261976 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 232-399 |
| Cow position: | chr12:25098783-25098950 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 232-471 |
| Cow position: | chr12:20996395-20996648 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 73, 65 |
| Conread position: | 232-480 |
| Cow position: | chr12:14660658-14660924 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 232-484 |
| Cow position: | chr12:28005564-28005307 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 233-484 |
| Cow position: | chr12:27931218-27931487 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 234-484 |
| Cow position: | chr12:1404185-1403924 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 71, 66 |
| Conread position: | 235-388 |
| Cow position: | chr12:22519291-22519444 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 235-482 |
| Cow position: | chr12:37560702-37560436 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 19, 30 |
| Conread position: | 235-484 |
| Cow position: | chr12:21482790-21482537 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 162, 129 |
| Conread position: | 237-448 |
| Cow position: | chr12:34175029-34174802 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 83, 10 |
| Conread position: | 237-481 |
| Cow position: | chr12:24433398-24433654 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 139, 237 |
| Conread position: | 249-470 |
| Cow position: | chr12:21943417-21943180 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 134, 19 |
| Conread position: | 252-471 |
| Cow position: | chr12:22568083-22568315 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 132, 221 |
| Conread position: | 254-388 |
| Cow position: | chr12:11581671-11581537 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 271-471 |
| Cow position: | chr12:21092074-21092278 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 112, 138 |
| Conread position: | 316-482 |
| Cow position: | chr12:21199588-21199413 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
Show alignments to all cow chromosomes.