Cow genome map
| Conread name: | rmas920b_n5.y1 |
| Conread position: | 231-358 |
| Cow position: | chr14:13462804-13462678 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 231-371 |
| Cow position: | chr14:35384277-35384415 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 231-385 |
| Cow position: | chr14:45082463-45082309 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-470 |
| Cow position: | chr14:2295617-2295366 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 145, 94 |
| Conread position: | 231-471 |
| Cow position: | chr14:5075290-5075046 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 142, 235 |
| Conread position: | 231-471 |
| Cow position: | chr14:29046323-29046580 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 231-471 |
| Cow position: | chr14:35425465-35425215 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 140, 16 |
| Conread position: | 231-481 |
| Cow position: | chr14:45027654-45027921 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 159, 88 |
| Conread position: | 231-482 |
| Cow position: | chr14:5514276-5514010 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 140, 217 |
| Conread position: | 231-482 |
| Cow position: | chr14:12123834-12124103 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-482 |
| Cow position: | chr14:16342553-16342818 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 142, 231 |
| Conread position: | 231-482 |
| Cow position: | chr14:16807974-16808243 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 231-482 |
| Cow position: | chr14:17687844-17687576 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 231-482 |
| Cow position: | chr14:27978704-27978435 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 231-482 |
| Cow position: | chr14:44380694-44380430 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 114, 190 |
| Conread position: | 231-482 |
| Cow position: | chr14:45670687-45670956 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-483 |
| Cow position: | chr14:45710391-45710650 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 231-484 |
| Cow position: | chr14:11152804-11153072 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 127, 243 |
| Conread position: | 231-484 |
| Cow position: | chr14:12611758-12611489 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 231-484 |
| Cow position: | chr14:13304301-13304030 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-484 |
| Cow position: | chr14:13579713-13579462 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 193, 28 |
| Conread position: | 231-484 |
| Cow position: | chr14:13780300-13780029 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 231-484 |
| Cow position: | chr14:15274492-15274761 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 153, 14 |
| Conread position: | 231-484 |
| Cow position: | chr14:16918373-16918640 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 151, 56 |
| Conread position: | 231-484 |
| Cow position: | chr14:19326914-19327185 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 151, 234 |
| Conread position: | 231-484 |
| Cow position: | chr14:20783816-20783545 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 231-484 |
| Cow position: | chr14:24996269-24996516 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 242, 91 |
| Conread position: | 231-484 |
| Cow position: | chr14:29774774-29775017 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 74, 14 |
| Conread position: | 231-484 |
| Cow position: | chr14:33678410-33678141 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 192 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 159, 94 |
| Conread position: | 231-484 |
| Cow position: | chr14:48601002-48601266 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 128, 233 |
| Conread position: | 231-484 |
| Cow position: | chr14:48826623-48826355 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 232-481 |
| Cow position: | chr14:44290411-44290146 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 232-484 |
| Cow position: | chr14:5530405-5530135 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 232-484 |
| Cow position: | chr14:22030102-22030368 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 150, 233 |
| Conread position: | 232-484 |
| Cow position: | chr14:32448301-32448040 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 150, 231 |
| Conread position: | 233-472 |
| Cow position: | chr14:25693292-25693047 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 156, 210 |
| Conread position: | 234-349 |
| Cow position: | chr14:50142319-50142206 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 234-385 |
| Cow position: | chr14:45086565-45086416 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 234-482 |
| Cow position: | chr14:30595011-30595275 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 153, 10 |
| Conread position: | 235-461 |
| Cow position: | chr14:44255439-44255664 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 137, 9 |
| Conread position: | 235-480 |
| Cow position: | chr14:13862754-13863015 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 237-388 |
| Cow position: | chr14:40167335-40167487 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 237-484 |
| Cow position: | chr14:191387-191122 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 237-484 |
| Cow position: | chr14:11475950-11476210 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 108, 226 |
| Conread position: | 237-484 |
| Cow position: | chr14:16999715-16999979 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 238-482 |
| Cow position: | chr14:44774729-44774966 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 247-484 |
| Cow position: | chr14:35930918-35930674 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 116, 41 |
| Conread position: | 251-457 |
| Cow position: | chr14:14031915-14032127 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 136, 84 |
| Conread position: | 251-484 |
| Cow position: | chr14:47939653-47939895 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 49 |
| Conread position: | 252-483 |
| Cow position: | chr14:17759569-17759812 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 269-484 |
| Cow position: | chr14:37454637-37454856 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 117, 183 |
| Conread position: | 278-484 |
| Cow position: | chr14:25365211-25365409 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 194, 19 |
| Conread position: | 286-471 |
| Cow position: | chr14:23932882-23932684 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.