Cow genome map
| Conread name: | rmas920b_n5.y1 |
| Conread position: | 230-484 |
| Cow position: | chr22:1268065-1268331 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 141, 30 |
| Conread position: | 231-377 |
| Cow position: | chr22:21336647-21336501 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-378 |
| Cow position: | chr22:6501223-6501368 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 231-380 |
| Cow position: | chr22:28783806-28783658 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 231-382 |
| Cow position: | chr22:8120089-8120240 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-383 |
| Cow position: | chr22:325484-325634 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 231-383 |
| Cow position: | chr22:11034035-11033881 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 231-385 |
| Cow position: | chr22:29353066-29352912 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-386 |
| Cow position: | chr22:18605108-18605263 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-386 |
| Cow position: | chr22:37135454-37135301 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 231-387 |
| Cow position: | chr22:1862098-1861936 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 102, 16 |
| Conread position: | 231-387 |
| Cow position: | chr22:8880790-8880634 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-388 |
| Cow position: | chr22:29499233-29499076 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-399 |
| Cow position: | chr22:40371733-40371570 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 231-461 |
| Cow position: | chr22:29037354-29037119 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 141, 60 |
| Conread position: | 231-470 |
| Cow position: | chr22:34601280-34601031 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 145, 45 |
| Conread position: | 231-471 |
| Cow position: | chr22:32282989-32283244 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 142, 244 |
| Conread position: | 231-474 |
| Cow position: | chr22:5313981-5313717 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-480 |
| Cow position: | chr22:21034697-21034964 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 140, 244 |
| Conread position: | 231-481 |
| Cow position: | chr22:46584876-46585139 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 153, 221 |
| Conread position: | 231-482 |
| Cow position: | chr22:297143-296870 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 231-482 |
| Cow position: | chr22:538801-538534 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 231-482 |
| Cow position: | chr22:3276664-3276933 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 231-482 |
| Cow position: | chr22:3803873-3803605 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 155, 237 |
| Conread position: | 231-482 |
| Cow position: | chr22:11803360-11803627 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 128, 223 |
| Conread position: | 231-482 |
| Cow position: | chr22:19141995-19142260 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-482 |
| Cow position: | chr22:20239146-20239413 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 231-482 |
| Cow position: | chr22:21194805-21195074 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 142, 231 |
| Conread position: | 231-482 |
| Cow position: | chr22:23752016-23752282 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 129, 69 |
| Conread position: | 231-482 |
| Cow position: | chr22:27308085-27308354 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 231-482 |
| Cow position: | chr22:30677021-30677290 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 231-482 |
| Cow position: | chr22:34170028-34169763 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 151, 234 |
| Conread position: | 231-482 |
| Cow position: | chr22:44492741-44492479 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 231-482 |
| Cow position: | chr22:45015037-45014775 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 52, 106 |
| Conread position: | 231-482 |
| Cow position: | chr22:46580025-46580294 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 231-483 |
| Cow position: | chr22:317174-316928 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 228, 144 |
| Conread position: | 231-483 |
| Cow position: | chr22:39467825-39468091 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 151, 234 |
| Conread position: | 231-484 |
| Cow position: | chr22:559016-559283 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 151, 234 |
| Conread position: | 231-484 |
| Cow position: | chr22:1519340-1519601 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 231 |
| Conread position: | 231-484 |
| Cow position: | chr22:3304911-3305176 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 153, 37 |
| Conread position: | 231-484 |
| Cow position: | chr22:6333401-6333135 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 151, 121 |
| Conread position: | 231-484 |
| Cow position: | chr22:8736657-8736920 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 141, 79 |
| Conread position: | 231-484 |
| Cow position: | chr22:17326765-17327036 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 231-484 |
| Cow position: | chr22:21591115-21590844 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 231-484 |
| Cow position: | chr22:23800540-23800795 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 127, 69 |
| Conread position: | 231-484 |
| Cow position: | chr22:29011582-29011851 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 231-484 |
| Cow position: | chr22:30129271-30129005 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 151, 15 |
| Conread position: | 231-484 |
| Cow position: | chr22:30146920-30146654 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 151, 15 |
| Conread position: | 231-484 |
| Cow position: | chr22:31333356-31333626 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 231-484 |
| Cow position: | chr22:36859856-36860126 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 151, 66 |
| Conread position: | 231-484 |
| Cow position: | chr22:37291985-37292252 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 150, 234 |
| Conread position: | 231-484 |
| Cow position: | chr22:42992862-42992597 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 145, 39 |
| Conread position: | 231-484 |
| Cow position: | chr22:44398122-44397853 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 231-484 |
| Cow position: | chr22:44517948-44518215 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 67 |
| Conread position: | 231-484 |
| Cow position: | chr22:44935655-44935390 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 151, 234 |
| Conread position: | 232-482 |
| Cow position: | chr22:521699-521969 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 232-484 |
| Cow position: | chr22:15310266-15310518 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 113, 135 |
| Conread position: | 234-465 |
| Cow position: | chr22:46614990-46614746 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 151, 73 |
| Conread position: | 234-471 |
| Cow position: | chr22:1323840-1323590 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 234-484 |
| Cow position: | chr22:14824011-14824273 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 12, 66 |
| Conread position: | 235-437 |
| Cow position: | chr22:15955339-15955544 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 150, 197 |
| Conread position: | 235-482 |
| Cow position: | chr22:695301-695040 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 235-482 |
| Cow position: | chr22:44367793-44368058 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 235-484 |
| Cow position: | chr22:1281046-1281312 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 235-484 |
| Cow position: | chr22:15853111-15852845 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 237-376 |
| Cow position: | chr22:44459339-44459200 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 237-482 |
| Cow position: | chr22:18028955-18028712 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 187, 10 |
| Conread position: | 237-484 |
| Cow position: | chr22:13767045-13766788 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 134, 63 |
| Conread position: | 238-483 |
| Cow position: | chr22:33352343-33352091 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 131, 30 |
| Conread position: | 239-467 |
| Cow position: | chr22:2563074-2563312 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 121, 57 |
| Conread position: | 250-470 |
| Cow position: | chr22:30654197-30653963 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 43, 87 |
| Conread position: | 252-478 |
| Cow position: | chr22:6022324-6022080 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 252-484 |
| Cow position: | chr22:13774188-13773942 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 254-388 |
| Cow position: | chr22:37142186-37142052 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-482 |
| Cow position: | chr22:10908166-10908412 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 254-484 |
| Cow position: | chr22:11807072-11807319 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 128, 46 |
| Conread position: | 263-465 |
| Cow position: | chr22:35905725-35905944 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 302-484 |
| Cow position: | chr22:44478364-44478167 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 74, 173 |
Show alignments to all cow chromosomes.