Cow genome map
| Conread name: | rmas920b_n5.y1 |
| Conread position: | 231-385 |
| Cow position: | chr24:23094246-23094400 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-385 |
| Cow position: | chr24:40468950-40468794 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 231-386 |
| Cow position: | chr24:25438380-25438225 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 231-464 |
| Cow position: | chr24:20286134-20286383 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 231-466 |
| Cow position: | chr24:19468830-19469072 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 166, 133 |
| Conread position: | 231-471 |
| Cow position: | chr24:6130587-6130335 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 151, 187 |
| Conread position: | 231-471 |
| Cow position: | chr24:12239069-12238808 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 231-472 |
| Cow position: | chr24:6658716-6658962 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 153, 244 |
| Conread position: | 231-480 |
| Cow position: | chr24:6036767-6036501 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-482 |
| Cow position: | chr24:310646-310377 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 231-482 |
| Cow position: | chr24:6338160-6337893 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 231-482 |
| Cow position: | chr24:6962972-6963241 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-482 |
| Cow position: | chr24:7063319-7063052 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-482 |
| Cow position: | chr24:13043849-13044118 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-482 |
| Cow position: | chr24:19703265-19703003 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 157, 133 |
| Conread position: | 231-482 |
| Cow position: | chr24:19835185-19834914 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 231-482 |
| Cow position: | chr24:23504081-23504350 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-482 |
| Cow position: | chr24:38585357-38585608 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 44, 14 |
| Conread position: | 231-482 |
| Cow position: | chr24:44019287-44019018 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 231-483 |
| Cow position: | chr24:14382852-14383119 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 153, 20 |
| Conread position: | 231-484 |
| Cow position: | chr24:4413777-4414035 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 111, 72 |
| Conread position: | 231-484 |
| Cow position: | chr24:6323572-6323847 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 158, 250 |
| Conread position: | 231-484 |
| Cow position: | chr24:9090282-9090544 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 7, 63 |
| Conread position: | 231-484 |
| Cow position: | chr24:12127332-12127600 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 151, 224 |
| Conread position: | 231-484 |
| Cow position: | chr24:16560532-16560806 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 231-484 |
| Cow position: | chr24:29189065-29188798 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 151, 233 |
| Conread position: | 231-484 |
| Cow position: | chr24:41004264-41003994 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 153, 69 |
| Conread position: | 231-484 |
| Cow position: | chr24:42583992-42584252 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 69 |
| Conread position: | 232-465 |
| Cow position: | chr24:13179244-13179491 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 141, 111 |
| Conread position: | 232-483 |
| Cow position: | chr24:22972842-22972572 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 232-484 |
| Cow position: | chr24:12087977-12087707 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 232-484 |
| Cow position: | chr24:12333963-12334223 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 130, 13 |
| Conread position: | 233-481 |
| Cow position: | chr24:14755775-14755509 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 233-483 |
| Cow position: | chr24:12204567-12204832 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 140, 242 |
| Conread position: | 234-484 |
| Cow position: | chr24:146836-147104 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 235-478 |
| Cow position: | chr24:13234023-13233772 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 235-481 |
| Cow position: | chr24:33935162-33934895 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 148, 0 |
| Conread position: | 235-484 |
| Cow position: | chr24:36557796-36558043 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 155, 77 |
| Conread position: | 237-370 |
| Cow position: | chr24:39679083-39678950 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 237-481 |
| Cow position: | chr24:35868812-35869059 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 140, 217 |
| Conread position: | 237-484 |
| Cow position: | chr24:6667989-6668236 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 152, 88 |
| Conread position: | 237-484 |
| Cow position: | chr24:8606593-8606324 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 237-484 |
| Cow position: | chr24:12569790-12569532 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 136, 197 |
| Conread position: | 238-484 |
| Cow position: | chr24:9545826-9545562 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 242-470 |
| Cow position: | chr24:36299174-36298945 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 63, 58 |
| Conread position: | 252-482 |
| Cow position: | chr24:5991468-5991716 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 257-484 |
| Cow position: | chr24:38639271-38639034 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 116, 212 |
| Conread position: | 261-482 |
| Cow position: | chr24:17322438-17322202 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 122, 25 |
| Conread position: | 278-482 |
| Cow position: | chr24:6407764-6407544 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 280-482 |
| Cow position: | chr24:12149565-12149782 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 107, 195 |
Show alignments to all cow chromosomes.