Cow genome map

Conread name: rmas920b_n5.y1

Conread position: 230-484
Cow position: chr3:36877041-36877305 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 195
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 8, 0

Conread position: 231-379
Cow position: chr3:59863180-59863032 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 231-380
Cow position: chr3:25687864-25687717 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 231-382
Cow position: chr3:15188427-15188276 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 231-383
Cow position: chr3:64356348-64356500 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 231-385
Cow position: chr3:58784538-58784692 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 231-388
Cow position: chr3:2906139-2906296 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 231-388
Cow position: chr3:19940547-19940391 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 35

Conread position: 231-388
Cow position: chr3:51857073-51857230 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 231-445
Cow position: chr3:24444483-24444712 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 140, 0

Conread position: 231-469
Cow position: chr3:19755346-19755598 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 142, 69

Conread position: 231-470
Cow position: chr3:20382653-20382399 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 159, 45

Conread position: 231-470
Cow position: chr3:53517227-53516972 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 151, 0

Conread position: 231-471
Cow position: chr3:18861035-18860780 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 153, 244

Conread position: 231-471
Cow position: chr3:27864791-27864540 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 142, 16

Conread position: 231-471
Cow position: chr3:45976117-45975873 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 73, 93

Conread position: 231-476
Cow position: chr3:5952569-5952828 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 151, 237

Conread position: 231-479
Cow position: chr3:5993470-5993728 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 147, 116

Conread position: 231-480
Cow position: chr3:2870406-2870139 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 145, 0

Conread position: 231-480
Cow position: chr3:69932216-69932483 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 151, 0

Conread position: 231-481
Cow position: chr3:3839900-3840167 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 150, 57

Conread position: 231-482
Cow position: chr3:1742949-1742680 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 142, 0

Conread position: 231-482
Cow position: chr3:2919082-2918818 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 133, 0

Conread position: 231-482
Cow position: chr3:4287704-4287438 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 142, 0

Conread position: 231-482
Cow position: chr3:6876570-6876829 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 159, 10

Conread position: 231-482
Cow position: chr3:7157101-7157371 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 0

Conread position: 231-482
Cow position: chr3:7248150-7247882 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 151, 61

Conread position: 231-482
Cow position: chr3:19799561-19799823 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 153, 179

Conread position: 231-482
Cow position: chr3:19880262-19879993 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 153, 0

Conread position: 231-482
Cow position: chr3:29575506-29575775 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 152, 0

Conread position: 231-482
Cow position: chr3:30617306-30617571 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 118, 0

Conread position: 231-482
Cow position: chr3:34505735-34505995 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 153, 0

Conread position: 231-482
Cow position: chr3:37970664-37970395 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 151, 0

Conread position: 231-482
Cow position: chr3:40338530-40338799 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 186
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 151, 0

Conread position: 231-482
Cow position: chr3:42448733-42448465 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 152, 0

Conread position: 231-482
Cow position: chr3:45034357-45034088 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 129, 0

Conread position: 231-482
Cow position: chr3:46859676-46859941 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 231

Conread position: 231-482
Cow position: chr3:50916955-50916693 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 82, 152

Conread position: 231-482
Cow position: chr3:51364171-51364437 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 142, 234

Conread position: 231-482
Cow position: chr3:56295803-56295535 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 151, 234

Conread position: 231-482
Cow position: chr3:56327725-56327457 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 122, 0

Conread position: 231-482
Cow position: chr3:58949146-58948886 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 164, 15

Conread position: 231-482
Cow position: chr3:64026520-64026786 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 185
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 118, 0

Conread position: 231-482
Cow position: chr3:68872137-68872406 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 151, 0

Conread position: 231-482
Cow position: chr3:68890953-68891221 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 11, 17

Conread position: 231-483
Cow position: chr3:2853834-2854098 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 153, 44

Conread position: 231-484
Cow position: chr3:2709252-2709520 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 142, 222

Conread position: 231-484
Cow position: chr3:6687405-6687137 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 160, 241

Conread position: 231-484
Cow position: chr3:18813118-18812845 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 195
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 7, 0

Conread position: 231-484
Cow position: chr3:21181080-21181346 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 151, 234

Conread position: 231-484
Cow position: chr3:23288715-23288987 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 199
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 42, 119

Conread position: 231-484
Cow position: chr3:31416634-31416363 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 196
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 78, 0

Conread position: 231-484
Cow position: chr3:32200634-32200367 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 153, 243

Conread position: 231-484
Cow position: chr3:34029302-34029574 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 199
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 7, 0

Conread position: 231-484
Cow position: chr3:48057743-48058014 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 125, 0

Conread position: 231-484
Cow position: chr3:49135947-49136218 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 7, 0

Conread position: 231-484
Cow position: chr3:49543594-49543857 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 199
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 140, 223

Conread position: 231-484
Cow position: chr3:63240626-63240899 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 148, 0

Conread position: 231-484
Cow position: chr3:64015765-64016018 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 142

Conread position: 231-484
Cow position: chr3:65208793-65208529 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 145, 43

Conread position: 231-484
Cow position: chr3:66621814-66621543 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 145, 0

Conread position: 231-484
Cow position: chr3:74851531-74851781 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 186
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 49, 54

Conread position: 232-342
Cow position: chr3:38095573-38095463 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 232-447
Cow position: chr3:48228899-48229128 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 153, 46

Conread position: 232-448
Cow position: chr3:43191675-43191907 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 150, 0

Conread position: 232-482
Cow position: chr3:4736308-4736559 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 110, 197

Conread position: 232-482
Cow position: chr3:40825008-40824741 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 150, 109

Conread position: 232-482
Cow position: chr3:56146921-56146652 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 143, 244

Conread position: 232-483
Cow position: chr3:30316163-30315896 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 148, 0

Conread position: 232-484
Cow position: chr3:595743-595483 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 149, 224

Conread position: 232-484
Cow position: chr3:7478298-7478568 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 126, 0

Conread position: 232-484
Cow position: chr3:57483109-57483376 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 144, 233

Conread position: 232-484
Cow position: chr3:78025804-78026066 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 139, 0

Conread position: 233-481
Cow position: chr3:46504165-46503901 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 149, 90

Conread position: 235-388
Cow position: chr3:64652222-64652070 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 235-482
Cow position: chr3:3524624-3524364 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 147, 12

Conread position: 235-482
Cow position: chr3:16224499-16224234 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 103, 0

Conread position: 235-482
Cow position: chr3:19945863-19945593 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 235-482
Cow position: chr3:36862844-36863109 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 147, 0

Conread position: 235-482
Cow position: chr3:66889356-66889618 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 148, 232

Conread position: 235-484
Cow position: chr3:15054091-15054354 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 62, 190

Conread position: 237-377
Cow position: chr3:38868199-38868059 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 237-385
Cow position: chr3:56338661-56338809 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 237-471
Cow position: chr3:67164890-67164643 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 158, 0

Conread position: 237-484
Cow position: chr3:29580221-29579976 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 187, 136

Conread position: 237-484
Cow position: chr3:38494848-38494588 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 84, 51

Conread position: 238-380
Cow position: chr3:77578529-77578667 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 239-462
Cow position: chr3:33634859-33634622 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 127

Conread position: 239-483
Cow position: chr3:47087886-47087644 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 145, 49

Conread position: 244-483
Cow position: chr3:5885133-5884879 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 138, 227

Conread position: 257-482
Cow position: chr3:74059117-74058875 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 103, 28

Conread position: 258-483
Cow position: chr3:46017623-46017402 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 115, 77

Conread position: 263-482
Cow position: chr3:27920013-27919776 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 119, 0

Conread position: 263-482
Cow position: chr3:51938518-51938750 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 112, 178

Show alignments to all cow chromosomes.