Cow genome map
| Conread name: | rmas920b_n5.y1 | 
| Conread position: | 230-484 | 
| Cow position: | chr3:36877041-36877305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 231-379 | 
| Cow position: | chr3:59863180-59863032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 231-380 | 
| Cow position: | chr3:25687864-25687717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 231-382 | 
| Cow position: | chr3:15188427-15188276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 231-383 | 
| Cow position: | chr3:64356348-64356500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 231-385 | 
| Cow position: | chr3:58784538-58784692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 231-388 | 
| Cow position: | chr3:2906139-2906296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 231-388 | 
| Cow position: | chr3:19940547-19940391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 7, 35 | 
| Conread position: | 231-388 | 
| Cow position: | chr3:51857073-51857230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 231-445 | 
| Cow position: | chr3:24444483-24444712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 140, 0 | 
| Conread position: | 231-469 | 
| Cow position: | chr3:19755346-19755598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 142, 69 | 
| Conread position: | 231-470 | 
| Cow position: | chr3:20382653-20382399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 159, 45 | 
| Conread position: | 231-470 | 
| Cow position: | chr3:53517227-53516972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 151, 0 | 
| Conread position: | 231-471 | 
| Cow position: | chr3:18861035-18860780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 153, 244 | 
| Conread position: | 231-471 | 
| Cow position: | chr3:27864791-27864540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 142, 16 | 
| Conread position: | 231-471 | 
| Cow position: | chr3:45976117-45975873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 73, 93 | 
| Conread position: | 231-476 | 
| Cow position: | chr3:5952569-5952828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 151, 237 | 
| Conread position: | 231-479 | 
| Cow position: | chr3:5993470-5993728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 147, 116 | 
| Conread position: | 231-480 | 
| Cow position: | chr3:2870406-2870139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 145, 0 | 
| Conread position: | 231-480 | 
| Cow position: | chr3:69932216-69932483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 151, 0 | 
| Conread position: | 231-481 | 
| Cow position: | chr3:3839900-3840167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 150, 57 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:1742949-1742680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 142, 0 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:2919082-2918818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 133, 0 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:4287704-4287438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 142, 0 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:6876570-6876829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 159, 10 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:7157101-7157371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:7248150-7247882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 151, 61 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:19799561-19799823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 153, 179 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:19880262-19879993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 153, 0 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:29575506-29575775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 152, 0 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:30617306-30617571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 8e-28 | 
| Alignm gaps (pig, cow): | 118, 0 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:34505735-34505995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 153, 0 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:37970664-37970395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 151, 0 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:40338530-40338799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 151, 0 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:42448733-42448465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 152, 0 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:45034357-45034088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 129, 0 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:46859676-46859941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 129, 231 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:50916955-50916693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 82, 152 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:51364171-51364437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 142, 234 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:56295803-56295535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 151, 234 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:56327725-56327457 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:58949146-58948886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 164, 15 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:64026520-64026786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 118, 0 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:68872137-68872406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 151, 0 | 
| Conread position: | 231-482 | 
| Cow position: | chr3:68890953-68891221 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 11, 17 | 
| Conread position: | 231-483 | 
| Cow position: | chr3:2853834-2854098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 153, 44 | 
| Conread position: | 231-484 | 
| Cow position: | chr3:2709252-2709520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 142, 222 | 
| Conread position: | 231-484 | 
| Cow position: | chr3:6687405-6687137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 160, 241 | 
| Conread position: | 231-484 | 
| Cow position: | chr3:18813118-18812845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 231-484 | 
| Cow position: | chr3:21181080-21181346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 151, 234 | 
| Conread position: | 231-484 | 
| Cow position: | chr3:23288715-23288987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 42, 119 | 
| Conread position: | 231-484 | 
| Cow position: | chr3:31416634-31416363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 231-484 | 
| Cow position: | chr3:32200634-32200367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 153, 243 | 
| Conread position: | 231-484 | 
| Cow position: | chr3:34029302-34029574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 231-484 | 
| Cow position: | chr3:48057743-48058014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 231-484 | 
| Cow position: | chr3:49135947-49136218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 231-484 | 
| Cow position: | chr3:49543594-49543857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 140, 223 | 
| Conread position: | 231-484 | 
| Cow position: | chr3:63240626-63240899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 148, 0 | 
| Conread position: | 231-484 | 
| Cow position: | chr3:64015765-64016018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 85, 142 | 
| Conread position: | 231-484 | 
| Cow position: | chr3:65208793-65208529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 145, 43 | 
| Conread position: | 231-484 | 
| Cow position: | chr3:66621814-66621543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 145, 0 | 
| Conread position: | 231-484 | 
| Cow position: | chr3:74851531-74851781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 49, 54 | 
| Conread position: | 232-342 | 
| Cow position: | chr3:38095573-38095463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 232-447 | 
| Cow position: | chr3:48228899-48229128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 153, 46 | 
| Conread position: | 232-448 | 
| Cow position: | chr3:43191675-43191907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 150, 0 | 
| Conread position: | 232-482 | 
| Cow position: | chr3:4736308-4736559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 110, 197 | 
| Conread position: | 232-482 | 
| Cow position: | chr3:40825008-40824741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 150, 109 | 
| Conread position: | 232-482 | 
| Cow position: | chr3:56146921-56146652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 143, 244 | 
| Conread position: | 232-483 | 
| Cow position: | chr3:30316163-30315896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 148, 0 | 
| Conread position: | 232-484 | 
| Cow position: | chr3:595743-595483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 149, 224 | 
| Conread position: | 232-484 | 
| Cow position: | chr3:7478298-7478568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 7e-37 | 
| Alignm gaps (pig, cow): | 126, 0 | 
| Conread position: | 232-484 | 
| Cow position: | chr3:57483109-57483376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 144, 233 | 
| Conread position: | 232-484 | 
| Cow position: | chr3:78025804-78026066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 139, 0 | 
| Conread position: | 233-481 | 
| Cow position: | chr3:46504165-46503901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 149, 90 | 
| Conread position: | 235-388 | 
| Cow position: | chr3:64652222-64652070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 235-482 | 
| Cow position: | chr3:3524624-3524364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 147, 12 | 
| Conread position: | 235-482 | 
| Cow position: | chr3:16224499-16224234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 103, 0 | 
| Conread position: | 235-482 | 
| Cow position: | chr3:19945863-19945593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 235-482 | 
| Cow position: | chr3:36862844-36863109 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 147, 0 | 
| Conread position: | 235-482 | 
| Cow position: | chr3:66889356-66889618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 148, 232 | 
| Conread position: | 235-484 | 
| Cow position: | chr3:15054091-15054354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 62, 190 | 
| Conread position: | 237-377 | 
| Cow position: | chr3:38868199-38868059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 237-385 | 
| Cow position: | chr3:56338661-56338809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 237-471 | 
| Cow position: | chr3:67164890-67164643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 158, 0 | 
| Conread position: | 237-484 | 
| Cow position: | chr3:29580221-29579976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 187, 136 | 
| Conread position: | 237-484 | 
| Cow position: | chr3:38494848-38494588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 84, 51 | 
| Conread position: | 238-380 | 
| Cow position: | chr3:77578529-77578667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 87, 0 | 
| Conread position: | 239-462 | 
| Cow position: | chr3:33634859-33634622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 55, 127 | 
| Conread position: | 239-483 | 
| Cow position: | chr3:47087886-47087644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 145, 49 | 
| Conread position: | 244-483 | 
| Cow position: | chr3:5885133-5884879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 138, 227 | 
| Conread position: | 257-482 | 
| Cow position: | chr3:74059117-74058875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 103, 28 | 
| Conread position: | 258-483 | 
| Cow position: | chr3:46017623-46017402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 115, 77 | 
| Conread position: | 263-482 | 
| Cow position: | chr3:27920013-27919776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 9e-29 | 
| Alignm gaps (pig, cow): | 119, 0 | 
| Conread position: | 263-482 | 
| Cow position: | chr3:51938518-51938750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 112, 178 | 
Show alignments to all cow chromosomes.
