Cow genome map

Conread name: rmas920b_n5.y1

Conread position: 191-471
Cow position: chr6:11870953-11871248 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 176
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 65, 74

Conread position: 230-470
Cow position: chr6:28170571-28170317 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 92, 189

Conread position: 231-359
Cow position: chr6:50111480-50111352 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 112, 125

Conread position: 231-380
Cow position: chr6:17048002-17047853 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 231-383
Cow position: chr6:26777508-26777657 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 231-388
Cow position: chr6:14390590-14390433 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 231-455
Cow position: chr6:57471329-57471089 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 151, 0

Conread position: 231-456
Cow position: chr6:18972802-18973039 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 143, 0

Conread position: 231-456
Cow position: chr6:35418644-35418885 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 151, 0

Conread position: 231-465
Cow position: chr6:12664659-12664909 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 151, 0

Conread position: 231-470
Cow position: chr6:58028388-58028134 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 234

Conread position: 231-470
Cow position: chr6:59594564-59594333 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 17, 0

Conread position: 231-471
Cow position: chr6:59617752-59617503 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 145, 82

Conread position: 231-479
Cow position: chr6:38273230-38272965 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 154, 0

Conread position: 231-480
Cow position: chr6:66233461-66233201 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 151, 0

Conread position: 231-481
Cow position: chr6:1534919-1535178 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 187
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 151, 62

Conread position: 231-481
Cow position: chr6:3150897-3150628 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 70, 245

Conread position: 231-481
Cow position: chr6:13309717-13309985 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 151, 234

Conread position: 231-481
Cow position: chr6:43791907-43792175 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 195
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 100, 92

Conread position: 231-482
Cow position: chr6:1409721-1409990 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 145, 16

Conread position: 231-482
Cow position: chr6:5749586-5749317 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 142, 0

Conread position: 231-482
Cow position: chr6:7139679-7139948 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 150, 0

Conread position: 231-482
Cow position: chr6:26669201-26669469 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 187
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 151, 128

Conread position: 231-482
Cow position: chr6:27171242-27170973 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 151, 0

Conread position: 231-482
Cow position: chr6:28187177-28187427 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 184, 62

Conread position: 231-482
Cow position: chr6:28489908-28490174 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 153, 54

Conread position: 231-482
Cow position: chr6:28703048-28703317 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 142, 0

Conread position: 231-482
Cow position: chr6:39910993-39910731 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 121, 231

Conread position: 231-482
Cow position: chr6:40276744-40276476 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 142, 0

Conread position: 231-482
Cow position: chr6:40327080-40326811 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 142, 0

Conread position: 231-482
Cow position: chr6:40378970-40379238 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 142, 16

Conread position: 231-482
Cow position: chr6:43619385-43619116 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 151, 0

Conread position: 231-482
Cow position: chr6:44002333-44002066 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 149, 232

Conread position: 231-482
Cow position: chr6:44148887-44149155 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 142, 0

Conread position: 231-482
Cow position: chr6:45587609-45587344 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 142, 0

Conread position: 231-482
Cow position: chr6:50636532-50636262 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 231-482
Cow position: chr6:52694687-52694420 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 151, 47

Conread position: 231-482
Cow position: chr6:65820309-65820577 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 231-482
Cow position: chr6:65907126-65907395 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 11, 110

Conread position: 231-483
Cow position: chr6:36528859-36528604 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 175
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 188, 0

Conread position: 231-483
Cow position: chr6:38206946-38206697 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 73

Conread position: 231-483
Cow position: chr6:58460660-58460927 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 153, 0

Conread position: 231-484
Cow position: chr6:49944-50213 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 151, 0

Conread position: 231-484
Cow position: chr6:183881-184152 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 197
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 127, 0

Conread position: 231-484
Cow position: chr6:477201-476929 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 7, 0

Conread position: 231-484
Cow position: chr6:703873-703604 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 151, 0

Conread position: 231-484
Cow position: chr6:3887856-3888122 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 145, 106

Conread position: 231-484
Cow position: chr6:5948118-5948391 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 129, 0

Conread position: 231-484
Cow position: chr6:10249946-10250214 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 241

Conread position: 231-484
Cow position: chr6:10338980-10339245 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 49

Conread position: 231-484
Cow position: chr6:11723537-11723802 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 151, 234

Conread position: 231-484
Cow position: chr6:12627360-12627093 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 97, 240

Conread position: 231-484
Cow position: chr6:15139512-15139783 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 203
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 151, 0

Conread position: 231-484
Cow position: chr6:24241066-24240798 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 151, 0

Conread position: 231-484
Cow position: chr6:25792096-25792366 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 145, 14

Conread position: 231-484
Cow position: chr6:27528358-27528625 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 127, 69

Conread position: 231-484
Cow position: chr6:30273232-30273503 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 126, 0

Conread position: 231-484
Cow position: chr6:35875049-35875318 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 150, 0

Conread position: 231-484
Cow position: chr6:40552920-40553191 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 146, 47

Conread position: 231-484
Cow position: chr6:40865665-40865930 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 151, 47

Conread position: 231-484
Cow position: chr6:41229105-41228836 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 151, 220

Conread position: 231-484
Cow position: chr6:44261818-44262083 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 145, 205

Conread position: 231-484
Cow position: chr6:51716194-51715923 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 151, 234

Conread position: 231-484
Cow position: chr6:51731742-51731475 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 133, 230

Conread position: 231-484
Cow position: chr6:65843277-65843006 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 191
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 127, 0

Conread position: 231-484
Cow position: chr6:66745654-66745383 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 132, 0

Conread position: 232-482
Cow position: chr6:28104204-28104471 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 141, 20

Conread position: 232-484
Cow position: chr6:915291-915026 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 34, 57

Conread position: 232-484
Cow position: chr6:3486764-3487032 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 150, 111

Conread position: 232-484
Cow position: chr6:8203850-8203579 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 150, 0

Conread position: 232-484
Cow position: chr6:16591617-16591362 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 132, 217

Conread position: 232-484
Cow position: chr6:34890466-34890732 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 126, 0

Conread position: 232-484
Cow position: chr6:39333211-39333483 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 55, 0

Conread position: 233-402
Cow position: chr6:11269787-11269958 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 129, 19

Conread position: 233-454
Cow position: chr6:1098390-1098605 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 140, 114

Conread position: 233-471
Cow position: chr6:47625721-47625469 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 149, 213

Conread position: 233-484
Cow position: chr6:10645379-10645111 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 144, 248

Conread position: 234-476
Cow position: chr6:64717978-64717719 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 142, 0

Conread position: 235-482
Cow position: chr6:2877026-2877291 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 124, 0

Conread position: 235-482
Cow position: chr6:47047523-47047788 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 138, 0

Conread position: 235-484
Cow position: chr6:3572252-3571985 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 150, 0

Conread position: 235-484
Cow position: chr6:25215875-25215608 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 141, 0

Conread position: 236-475
Cow position: chr6:48579377-48579623 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 138, 96

Conread position: 237-385
Cow position: chr6:3275488-3275636 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 237-475
Cow position: chr6:40317248-40316998 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 69, 63

Conread position: 237-483
Cow position: chr6:47041554-47041816 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 145, 0

Conread position: 237-484
Cow position: chr6:8759642-8759905 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 145, 0

Conread position: 238-483
Cow position: chr6:58602133-58601873 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 194
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 149, 10

Conread position: 239-480
Cow position: chr6:6158362-6158113 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 138, 41

Conread position: 245-484
Cow position: chr6:55541608-55541865 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 139, 0

Conread position: 251-475
Cow position: chr6:2577603-2577380 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 127, 95

Conread position: 252-482
Cow position: chr6:21835556-21835791 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 133, 188

Conread position: 252-484
Cow position: chr6:10680057-10679813 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 121, 213

Conread position: 271-482
Cow position: chr6:16053731-16053502 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 113, 55

Conread position: 271-482
Cow position: chr6:20559489-20559712 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 105, 74

Show alignments to all cow chromosomes.