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Cow genome map

           
Conread name:
           
rmcp03c_e14.y1
        

               
Conread position:
               
1-107
               

               
Cow position:
               
chr13:34555833-34555940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-110
               

               
Cow position:
               
chr13:29123301-29123189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-111
               

               
Cow position:
               
chr13:47634503-47634391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-116
               

               
Cow position:
               
chr13:18181779-18181897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr13:15885026-15885148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 110
               

               
Conread position:
               
1-123
               

               
Cow position:
               
chr13:10928997-10929117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 23
               

               
Conread position:
               
1-123
               

               
Cow position:
               
chr13:31529873-31529749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr13:31813872-31813742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-129
               

               
Cow position:
               
chr13:43762164-43762035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
1-129
               

               
Cow position:
               
chr13:51116028-51116159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-133
               

               
Cow position:
               
chr13:20679335-20679201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr13:20706209-20706351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-142
               

               
Cow position:
               
chr13:5082646-5082503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr13:17439775-17439919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr13:21295071-21294922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr13:52586041-52586187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 126
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr13:19320529-19320374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 139
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr13:23856206-23856055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
100, 119
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr13:16160413-16160245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr13:38702880-38703054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:20666393-20666565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr13:23479026-23478849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr13:18340529-18340328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
28, 132
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr13:35557115-35557319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
25, 127
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr13:6974157-6973953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 133
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr13:18092879-18093078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr13:24230210-24230001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
22, 196
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr13:27525263-27525469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr13:15257373-15257578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr13:45023216-45023435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr13:9707753-9707960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr13:15192892-15193102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 40
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr13:18166728-18166519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 127
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr13:18696836-18696610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr13:19007925-19007730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 11
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr13:19883041-19883247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr13:37985748-37985961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr13:45439518-45439319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr13:12974810-12974601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr13:18197613-18197821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
101, 120
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr13:20784586-20784380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr13:44003695-44003485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr13:61976964-61977172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr13:7149516-7149715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr13:12670455-12670668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 121
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr13:34281671-34281465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr13:42200615-42200404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr13:62008103-62007891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 120
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr13:10210663-10210871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr13:10924925-10925142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr13:13775247-13775470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr13:15991235-15991447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 22
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr13:19610571-19610783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr13:29663023-29662801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr13:33974729-33974529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 83
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr13:35526205-35526411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr13:37621364-37621592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr13:48222552-48222768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr13:52055596-52055810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr13:6079416-6079622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr13:18058254-18058465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 108
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr13:151959-151751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 116
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr13:15061485-15061709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
23, 136
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr13:17745239-17745038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr13:18999531-18999309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 128
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr13:28440542-28440754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr13:36877056-36876845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
23, 125
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr13:37614194-37614418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 132
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr13:53573964-53573760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr13:55765182-55765398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
22, 104
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr13:10522930-10522715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr13:16908213-16907991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr13:24369577-24369364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 72
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr13:23960810-23961029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr13:25504528-25504312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 116
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:84574-84363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:1462301-1462514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:3209324-3209548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
23, 122
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:5263285-5263502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:6189604-6189824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:6486255-6486476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 44
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:8350319-8350075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:15288929-15289142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:17089524-17089738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:17971035-17971263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
23, 29
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:20271230-20271455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:20473686-20473899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:21171574-21171794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
23, 123
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:32017516-32017743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
28, 133
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:33256492-33256273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 29
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:43595113-43595329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:46111961-46111743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr13:47007723-47007935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 116
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr13:17569106-17569321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr13:21107135-21106919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr13:21127345-21127567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr13:42849137-42849357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 116
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr13:6183424-6183659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr13:13501622-13501839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 120
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr13:20534891-20534673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
112, 118
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr13:38872952-38873183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr13:15997030-15996803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 137
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr13:19279090-19278867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr13:19598669-19598897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 120
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr13:33601237-33601458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr13:37775211-37775437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
22, 120
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr13:45353027-45352795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr13:49022872-49023097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
23, 119
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr13:54389025-54389247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:11808570-11808357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:12875979-12876209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:14927256-14927023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:17114383-17114612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:21288090-21288316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:21980980-21981202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
23, 43
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:24753883-24753665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 125
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:25579194-25579424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 192
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:38283982-38284201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 122
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:43480053-43479829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:54702182-54701951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
23, 132
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr13:13196235-13196012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr13:15083655-15083430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 43
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr13:37592950-37593178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 122
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr13:5671590-5671819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr13:54582868-54582641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr13:28552584-28552347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 137
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr13:25926786-25926550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 128
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr13:13089021-13088795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
101, 28
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr13:50768592-50768345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
2-134
               

               
Cow position:
               
chr13:15460781-15460917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
2-146
               

               
Cow position:
               
chr13:18172330-18172186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr13:12673300-12673495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr13:19022265-19022055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
23, 10
               

               
Conread position:
               
2-214
               

               
Cow position:
               
chr13:38035829-38035623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr13:17813466-17813254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
21, 126
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr13:34263375-34263591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 136
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr13:56686426-56686226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr13:49503538-49503759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr13:60375496-60375706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr13:46525434-46525648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr13:4790122-4790348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
21, 100
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr13:17611558-17611775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr13:57002720-57002497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr13:14645045-14644825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr13:43525241-43525481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr13:45073261-45073476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr13:11460627-11460496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr13:46329612-46329812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 130
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr13:55494533-55494728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr13:20288328-20288128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr13:41157398-41157186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr13:17350344-17350131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr13:6980913-6980712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr13:15993379-15993170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 73
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr13:20820836-20821050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr13:47675942-47676151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr13:49356056-49356263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr13:8450323-8450117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr13:8374780-8374978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr13:26726613-26726827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr13:41806765-41806559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr13:57985944-57986151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 114
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr13:28439403-28439198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 119
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr13:56535448-56535247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 33
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr13:2776281-2776062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr13:6540322-6540524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr13:38329610-38329394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 119
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr13:47243561-47243774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr13:8699743-8699966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
20, 211
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr13:13260993-13260767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr13:52477656-52477869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 7
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr13:55674214-55674433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 119
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr13:5758348-5758562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
20, 117
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr13:15194741-15194949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
21, 108
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr13:30798715-30798476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr13:32283120-32282894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
99, 11
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr13:26698506-26698727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr13:25941270-25941514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr13:23667246-23667040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
20, 118
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr13:53850817-53850603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 136
               

               
Conread position:
               
4-222
               

               
Cow position:
               
chr13:20360271-20360050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
5-176
               

               
Cow position:
               
chr13:52057549-52057379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
19, 122
               

               
Conread position:
               
5-205
               

               
Cow position:
               
chr13:971907-972104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
5-231
               

               
Cow position:
               
chr13:21242092-21242308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 117
               

               
Conread position:
               
6-133
               

               
Cow position:
               
chr13:6086901-6087030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
20, 88
               

               
Conread position:
               
6-144
               

               
Cow position:
               
chr13:547483-547345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
105, 91
               

               
Conread position:
               
6-146
               

               
Cow position:
               
chr13:40943234-40943093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
6-167
               

               
Cow position:
               
chr13:37980767-37980928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
6-207
               

               
Cow position:
               
chr13:6926508-6926303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
6-207
               

               
Cow position:
               
chr13:19393282-19393087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
6-207
               

               
Cow position:
               
chr13:37803883-37803670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
6-211
               

               
Cow position:
               
chr13:7104645-7104445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 111
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr13:17158885-17159099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr13:25817517-25817312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
18, 54
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr13:35659750-35659537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr13:43787846-43788065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr13:43839685-43839904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
6-217
               

               
Cow position:
               
chr13:21135910-21136131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
6-219
               

               
Cow position:
               
chr13:39939585-39939787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
96, 41
               

               
Conread position:
               
6-220
               

               
Cow position:
               
chr13:15757111-15756894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 72
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr13:21235680-21235892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
18, 103
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr13:52894139-52893923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 135
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chr13:10989083-10989300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chr13:58763627-58763834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 120
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr13:18995114-18994898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
99, 34
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr13:20879833-20880057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 132
               

               
Conread position:
               
7-201
               

               
Cow position:
               
chr13:20217408-20217601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 120
               

               
Conread position:
               
7-207
               

               
Cow position:
               
chr13:24586033-24585839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
7-214
               

               
Cow position:
               
chr13:51528453-51528654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
7-217
               

               
Cow position:
               
chr13:15239524-15239731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
7-255
               

               
Cow position:
               
chr13:9265841-9266107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
8-220
               

               
Cow position:
               
chr13:50622823-50623033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
8-221
               

               
Cow position:
               
chr13:17057859-17058079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
15, 31
               

               
Conread position:
               
8-227
               

               
Cow position:
               
chr13:13781168-13780948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 81
               

               
Conread position:
               
9-215
               

               
Cow position:
               
chr13:40154742-40154956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 149
               

               
Conread position:
               
9-222
               

               
Cow position:
               
chr13:12449000-12449207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
9-230
               

               
Cow position:
               
chr13:49283792-49284012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
15, 122
               

               
Conread position:
               
10-203
               

               
Cow position:
               
chr13:52027150-52027341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
10-222
               

               
Cow position:
               
chr13:16163568-16163369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
92, 110
               

               
Conread position:
               
10-229
               

               
Cow position:
               
chr13:48127094-48126873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
11-222
               

               
Cow position:
               
chr13:51249394-51249601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
11, 119
               

               
Conread position:
               
11-231
               

               
Cow position:
               
chr13:50565329-50565545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
198, 10
               

               
Conread position:
               
12-199
               

               
Cow position:
               
chr13:13211869-13211689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
12-207
               

               
Cow position:
               
chr13:13320782-13320588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
12, 123
               

               
Conread position:
               
12-211
               

               
Cow position:
               
chr13:8637683-8637481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 116
               

               
Conread position:
               
12-211
               

               
Cow position:
               
chr13:13283332-13283125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
13-134
               

               
Cow position:
               
chr13:21188352-21188229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 108
               

               
Conread position:
               
13-145
               

               
Cow position:
               
chr13:37640573-37640437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
13-228
               

               
Cow position:
               
chr13:14063537-14063752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 122
               

               
Conread position:
               
14-218
               

               
Cow position:
               
chr13:14411876-14411671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
14-222
               

               
Cow position:
               
chr13:44322877-44322667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
89, 67
               

               
Conread position:
               
14-230
               

               
Cow position:
               
chr13:42302057-42302274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
15-215
               

               
Cow position:
               
chr13:52177581-52177384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
15-226
               

               
Cow position:
               
chr13:47644042-47643818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
15-227
               

               
Cow position:
               
chr13:17021744-17021955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
15-228
               

               
Cow position:
               
chr13:19178155-19177939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
16-180
               

               
Cow position:
               
chr13:9391541-9391382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
8, 101
               

               
Conread position:
               
16-228
               

               
Cow position:
               
chr13:3594301-3594102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
17-127
               

               
Cow position:
               
chr13:12237425-12237313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
17-159
               

               
Cow position:
               
chr13:20826745-20826890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 11
               

               
Conread position:
               
17-194
               

               
Cow position:
               
chr13:16834552-16834732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr13:48597888-48597700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
119, 98
               

               
Conread position:
               
17-212
               

               
Cow position:
               
chr13:20174717-20174523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
17-215
               

               
Cow position:
               
chr13:6113548-6113749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
85, 6
               

               
Conread position:
               
17-218
               

               
Cow position:
               
chr13:15195227-15195421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
17-222
               

               
Cow position:
               
chr13:20261351-20261559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
17-228
               

               
Cow position:
               
chr13:31507464-31507670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
8, 104
               

               
Conread position:
               
17-233
               

               
Cow position:
               
chr13:43811920-43811691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
18-197
               

               
Cow position:
               
chr13:19778875-19779054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
100, 118
               

               
Conread position:
               
20-222
               

               
Cow position:
               
chr13:6012746-6012944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
21-184
               

               
Cow position:
               
chr13:16790184-16790026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
77, 100
               

               
Conread position:
               
21-194
               

               
Cow position:
               
chr13:16714293-16714462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
21-199
               

               
Cow position:
               
chr13:48165454-48165624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
21-207
               

               
Cow position:
               
chr13:44201982-44201800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
92, 79
               

               
Conread position:
               
21-211
               

               
Cow position:
               
chr13:26261813-26262005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
21-214
               

               
Cow position:
               
chr13:33854709-33854897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
80, 98
               

               
Conread position:
               
21-215
               

               
Cow position:
               
chr13:22601720-22601903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 15
               

               
Conread position:
               
21-218
               

               
Cow position:
               
chr13:37554899-37555091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
21-222
               

               
Cow position:
               
chr13:20314647-20314849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
80, 108
               

               
Conread position:
               
21-223
               

               
Cow position:
               
chr13:369151-369350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 6
               

               
Conread position:
               
21-227
               

               
Cow position:
               
chr13:22345302-22345504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
21-228
               

               
Cow position:
               
chr13:21275834-21275627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
81, 100
               

               
Conread position:
               
21-234
               

               
Cow position:
               
chr13:21277492-21277690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
80, 99
               

               
Conread position:
               
22-181
               

               
Cow position:
               
chr13:6975871-6976026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 99
               

               
Conread position:
               
22-211
               

               
Cow position:
               
chr13:3153724-3153534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
22-211
               

               
Cow position:
               
chr13:27027924-27028118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
22-211
               

               
Cow position:
               
chr13:34261205-34261022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
80, 104
               

               
Conread position:
               
22-211
               

               
Cow position:
               
chr13:52913847-52913663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
76, 99
               

               
Conread position:
               
22-214
               

               
Cow position:
               
chr13:1147176-1147367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 95
               

               
Conread position:
               
22-214
               

               
Cow position:
               
chr13:46516035-46515843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 117
               

               
Conread position:
               
22-215
               

               
Cow position:
               
chr13:1539215-1539019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
22-215
               

               
Cow position:
               
chr13:14576187-14575996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
80, 99
               

               
Conread position:
               
22-215
               

               
Cow position:
               
chr13:24715213-24715032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
80, 5
               

               
Conread position:
               
22-215
               

               
Cow position:
               
chr13:50646657-50646846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 104
               

               
Conread position:
               
22-218
               

               
Cow position:
               
chr13:16099147-16099349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
22-220
               

               
Cow position:
               
chr13:11147031-11146832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 193
               

               
Conread position:
               
22-221
               

               
Cow position:
               
chr13:16038312-16038508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 71
               

               
Conread position:
               
22-222
               

               
Cow position:
               
chr13:11103225-11103435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
22-222
               

               
Cow position:
               
chr13:11434601-11434800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 76
               

               
Conread position:
               
22-222
               

               
Cow position:
               
chr13:20042291-20042489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
22-222
               

               
Cow position:
               
chr13:21170499-21170305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
80, 6
               

               
Conread position:
               
22-222
               

               
Cow position:
               
chr13:21246735-21246938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
22-223
               

               
Cow position:
               
chr13:25978219-25978421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
115, 79
               

               
Conread position:
               
22-224
               

               
Cow position:
               
chr13:30711199-30710992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
96, 129
               

               
Conread position:
               
22-226
               

               
Cow position:
               
chr13:30148589-30148783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
80, 98
               

               
Conread position:
               
22-227
               

               
Cow position:
               
chr13:11410688-11410478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
55, 117
               

               
Conread position:
               
22-227
               

               
Cow position:
               
chr13:20137794-20137586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 6
               

               
Conread position:
               
23-183
               

               
Cow position:
               
chr13:10711442-10711600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
78, 98
               

               
Conread position:
               
23-222
               

               
Cow position:
               
chr13:26423024-26422814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
79, 202
               

               
Conread position:
               
24-229
               

               
Cow position:
               
chr13:6616787-6616996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
83, 69
               

               
Conread position:
               
24-231
               

               
Cow position:
               
chr13:34532960-34533159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
83, 105
               

               
Conread position:
               
24-232
               

               
Cow position:
               
chr13:17135240-17135452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 99
               

               
Conread position:
               
25-222
               

               
Cow position:
               
chr13:57770018-57770208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
77, 27
               

               
Conread position:
               
26-227
               

               
Cow position:
               
chr13:8537792-8537589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
27-222
               

               
Cow position:
               
chr13:46347108-46346905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
27-227
               

               
Cow position:
               
chr13:24796847-24796656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 92
               

               
Conread position:
               
28-189
               

               
Cow position:
               
chr13:1037607-1037446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
28-200
               

               
Cow position:
               
chr13:4404499-4404332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 103
               

               
Conread position:
               
28-211
               

               
Cow position:
               
chr13:54682072-54681880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
28-214
               

               
Cow position:
               
chr13:11565805-11565623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
28-215
               

               
Cow position:
               
chr13:10220929-10220738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
28-216
               

               
Cow position:
               
chr13:5092426-5092613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
74, 110
               

               
Conread position:
               
28-218
               

               
Cow position:
               
chr13:21280529-21280721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
28-218
               

               
Cow position:
               
chr13:25520947-25521143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 192
               

               
Conread position:
               
28-218
               

               
Cow position:
               
chr13:42672455-42672652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr13:19033526-19033334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
77, 72
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr13:19222640-19222447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
90, 10
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr13:27181009-27180810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr13:37030310-37030123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
185, 89
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr13:40541137-40541337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 98
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr13:57323114-57322924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
74, 99
               

               
Conread position:
               
28-225
               

               
Cow position:
               
chr13:28695828-28695628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
74, 91
               

               
Conread position:
               
28-228
               

               
Cow position:
               
chr13:9124892-9124696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
74, 48
               

               
Conread position:
               
28-229
               

               
Cow position:
               
chr13:6861149-6860944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
28-229
               

               
Cow position:
               
chr13:10715831-10715629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 111
               

               
Conread position:
               
28-229
               

               
Cow position:
               
chr13:11543537-11543328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
28-229
               

               
Cow position:
               
chr13:20115216-20115013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
91, 111
               

               
Conread position:
               
28-233
               

               
Cow position:
               
chr13:50457826-50457616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
28-248
               

               
Cow position:
               
chr13:34873557-34873337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 176
               

               
Conread position:
               
29-215
               

               
Cow position:
               
chr13:17822983-17823169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 97
               

               
Conread position:
               
29-222
               

               
Cow position:
               
chr13:3149464-3149658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 97
               

               
Conread position:
               
29-225
               

               
Cow position:
               
chr13:20520283-20520085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 187
               

               
Conread position:
               
29-227
               

               
Cow position:
               
chr13:56034891-56035085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 97
               

               
Conread position:
               
29-233
               

               
Cow position:
               
chr13:45499196-45498995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
77, 71
               

               
Conread position:
               
30-186
               

               
Cow position:
               
chr13:52249082-52249233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 91
               

               
Conread position:
               
30-207
               

               
Cow position:
               
chr13:11202007-11201829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
72, 96
               

               
Conread position:
               
30-212
               

               
Cow position:
               
chr13:49204971-49204798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
30-218
               

               
Cow position:
               
chr13:15041507-15041695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
103, 94
               

               
Conread position:
               
30-222
               

               
Cow position:
               
chr13:20088749-20088943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
30-222
               

               
Cow position:
               
chr13:23805051-23805247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
30-222
               

               
Cow position:
               
chr13:57929604-57929787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 91
               

               
Conread position:
               
30-224
               

               
Cow position:
               
chr13:18215332-18215132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 157
               

               
Conread position:
               
30-228
               

               
Cow position:
               
chr13:6865699-6865894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
71, 54
               

               
Conread position:
               
30-229
               

               
Cow position:
               
chr13:16525257-16525459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
31-214
               

               
Cow position:
               
chr13:28376595-28376778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 105
               

               
Conread position:
               
31-215
               

               
Cow position:
               
chr13:13796846-13797036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
31-218
               

               
Cow position:
               
chr13:23685034-23685224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 95
               

               
Conread position:
               
31-221
               

               
Cow position:
               
chr13:16247613-16247420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
86, 108
               

               
Conread position:
               
31-222
               

               
Cow position:
               
chr13:52464706-52464514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 48
               

               
Conread position:
               
32-215
               

               
Cow position:
               
chr13:5930344-5930528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
69, 15
               

               
Conread position:
               
32-215
               

               
Cow position:
               
chr13:8367679-8367501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
34-144
               

               
Cow position:
               
chr13:28652703-28652591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
34-215
               

               
Cow position:
               
chr13:13265523-13265347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
68, 91
               

               
Conread position:
               
34-218
               

               
Cow position:
               
chr13:55775322-55775143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
34-222
               

               
Cow position:
               
chr13:16711311-16711122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
74, 103
               

               
Conread position:
               
34-222
               

               
Cow position:
               
chr13:55143235-55143050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 87
               

               
Conread position:
               
36-210
               

               
Cow position:
               
chr13:38702669-38702849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
36-211
               

               
Cow position:
               
chr13:19427595-19427421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
85, 95
               

               
Conread position:
               
36-215
               

               
Cow position:
               
chr13:10986541-10986726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
36-215
               

               
Cow position:
               
chr13:20510981-20510801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 138
               

               
Conread position:
               
36-222
               

               
Cow position:
               
chr13:22046048-22046233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
28, 96
               

               
Conread position:
               
36-222
               

               
Cow position:
               
chr13:38334916-38335103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
36-237
               

               
Cow position:
               
chr13:6663793-6663998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
37-215
               

               
Cow position:
               
chr13:21425871-21426036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
37-220
               

               
Cow position:
               
chr13:17619851-17619654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
65, 89
               

               
Conread position:
               
37-221
               

               
Cow position:
               
chr13:14544094-14543913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
38-222
               

               
Cow position:
               
chr13:28081680-28081491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
64, 88
               

               
Conread position:
               
39-230
               

               
Cow position:
               
chr13:17975006-17975195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 59
               

               
Conread position:
               
40-209
               

               
Cow position:
               
chr13:26395417-26395248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
40-211
               

               
Cow position:
               
chr13:17624278-17624104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
73, 97
               

               
Conread position:
               
40-211
               

               
Cow position:
               
chr13:43576970-43576797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
40-216
               

               
Cow position:
               
chr13:17292175-17292346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
62, 88
               

               
Conread position:
               
40-222
               

               
Cow position:
               
chr13:1339185-1339369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 101
               

               
Conread position:
               
40-228
               

               
Cow position:
               
chr13:37069301-37069112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
40-229
               

               
Cow position:
               
chr13:14351538-14351355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
40-229
               

               
Cow position:
               
chr13:32186236-32186034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
40-233
               

               
Cow position:
               
chr13:17994417-17994610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 68
               

               
Conread position:
               
41-199
               

               
Cow position:
               
chr13:8667575-8667414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 100
               

               
Conread position:
               
41-213
               

               
Cow position:
               
chr13:37946434-37946601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
41-215
               

               
Cow position:
               
chr13:32914301-32914479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
41-222
               

               
Cow position:
               
chr13:5992810-5992621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
60, 143
               

               
Conread position:
               
41-222
               

               
Cow position:
               
chr13:28536362-28536548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 98
               

               
Conread position:
               
41-226
               

               
Cow position:
               
chr13:54127872-54128059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 99
               

               
Conread position:
               
41-227
               

               
Cow position:
               
chr13:15162676-15162867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 86
               

               
Conread position:
               
41-228
               

               
Cow position:
               
chr13:10279881-10279691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
11, 147
               

               
Conread position:
               
41-232
               

               
Cow position:
               
chr13:620294-620479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
96, 36
               

               
Conread position:
               
41-234
               

               
Cow position:
               
chr13:37405666-37405477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
60, 80
               

               
Conread position:
               
41-236
               

               
Cow position:
               
chr13:14796164-14795969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
67, 164
               

               
Conread position:
               
42-210
               

               
Cow position:
               
chr13:311392-311220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
60, 93
               

               
Conread position:
               
42-215
               

               
Cow position:
               
chr13:5175551-5175382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 42
               

               
Conread position:
               
42-222
               

               
Cow position:
               
chr13:23399720-23399544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 84
               

               
Conread position:
               
42-229
               

               
Cow position:
               
chr13:41979191-41979371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
42-234
               

               
Cow position:
               
chr13:6969598-6969801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 47
               

               
Conread position:
               
43-218
               

               
Cow position:
               
chr13:53619957-53619780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
59, 83
               

               
Conread position:
               
43-230
               

               
Cow position:
               
chr13:27198861-27198685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
58, 78
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr13:19223608-19223416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
59, 83
               

               
Conread position:
               
44-222
               

               
Cow position:
               
chr13:8362791-8362970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 94
               

               
Conread position:
               
44-227
               

               
Cow position:
               
chr13:23823082-23823260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
69, 53
               

               
Conread position:
               
47-205
               

               
Cow position:
               
chr13:11260224-11260070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
47-207
               

               
Cow position:
               
chr13:1568880-1568725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
54, 8
               

               
Conread position:
               
47-207
               

               
Cow position:
               
chr13:38683067-38683233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
47-208
               

               
Cow position:
               
chr13:20854507-20854670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 92
               

               
Conread position:
               
47-210
               

               
Cow position:
               
chr13:714510-714676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
47-216
               

               
Cow position:
               
chr13:11231345-11231515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
55, 79
               

               
Conread position:
               
47-218
               

               
Cow position:
               
chr13:13533716-13533882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
47-218
               

               
Cow position:
               
chr13:21955116-21955290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
47-218
               

               
Cow position:
               
chr13:30693518-30693342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 117
               

               
Conread position:
               
47-219
               

               
Cow position:
               
chr13:42203974-42203809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 90
               

               
Conread position:
               
47-219
               

               
Cow position:
               
chr13:42614033-42613870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
47-222
               

               
Cow position:
               
chr13:6951528-6951356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
47-222
               

               
Cow position:
               
chr13:45073965-45074127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
47-228
               

               
Cow position:
               
chr13:9492720-9492548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 37
               

               
Conread position:
               
47-228
               

               
Cow position:
               
chr13:21024936-21024755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
47-228
               

               
Cow position:
               
chr13:26377467-26377648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
40, 167
               

               
Conread position:
               
47-243
               

               
Cow position:
               
chr13:43342517-43342325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 82
               

               
Conread position:
               
48-215
               

               
Cow position:
               
chr13:19588820-19588651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 91
               

               
Conread position:
               
48-222
               

               
Cow position:
               
chr13:29665969-29665795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
50-209
               

               
Cow position:
               
chr13:40483033-40483191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
55, 50
               

               
Conread position:
               
50-217
               

               
Cow position:
               
chr13:23795442-23795599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
52, 8
               

               
Conread position:
               
50-222
               

               
Cow position:
               
chr13:5659821-5659992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
51-215
               

               
Cow position:
               
chr13:9108730-9108890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
51, 69
               

               
Conread position:
               
51-222
               

               
Cow position:
               
chr13:23478847-23478676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
51, 75
               

               
Conread position:
               
54-214
               

               
Cow position:
               
chr13:14782284-14782132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
48, 72
               

               
Conread position:
               
55-220
               

               
Cow position:
               
chr13:26480263-26480423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 82
               

               
Conread position:
               
55-222
               

               
Cow position:
               
chr13:17787682-17787853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
55-222
               

               
Cow position:
               
chr13:47651475-47651640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
55-222
               

               
Cow position:
               
chr13:53847180-53847346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 71
               

               
Conread position:
               
58-207
               

               
Cow position:
               
chr13:25313211-25313358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
58-221
               

               
Cow position:
               
chr13:10040622-10040778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
58-234
               

               
Cow position:
               
chr13:7097524-7097353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
59-215
               

               
Cow position:
               
chr13:38396094-38395937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
63-214
               

               
Cow position:
               
chr13:45141989-45142152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
63-219
               

               
Cow position:
               
chr13:4135816-4135659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
38, 57
               

               
Conread position:
               
63-222
               

               
Cow position:
               
chr13:58157124-58157280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
41, 67
               

               
Conread position:
               
63-228
               

               
Cow position:
               
chr13:242568-242400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
63-230
               

               
Cow position:
               
chr13:15869047-15868877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 58
               

               
Conread position:
               
64-173
               

               
Cow position:
               
chr13:51020903-51020792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
64-228
               

               
Cow position:
               
chr13:25924290-25924461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
65-215
               

               
Cow position:
               
chr13:3387857-3388011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
65-221
               

               
Cow position:
               
chr13:55007841-55007994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 35
               

               
Conread position:
               
65-228
               

               
Cow position:
               
chr13:20413617-20413785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
65-228
               

               
Cow position:
               
chr13:39775552-39775719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
5, 153
               

               
Conread position:
               
66-227
               

               
Cow position:
               
chr13:41474802-41474644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
67-221
               

               
Cow position:
               
chr13:17815167-17815018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
34, 38
               

               
Conread position:
               
70-217
               

               
Cow position:
               
chr13:62304497-62304350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 60
               

               
Conread position:
               
70-222
               

               
Cow position:
               
chr13:50545472-50545318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
42, 66
               

               
Conread position:
               
73-222
               

               
Cow position:
               
chr13:9612992-9612851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
77-216
               

               
Cow position:
               
chr13:46330017-46330159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 53
               

               
Conread position:
               
77-222
               

               
Cow position:
               
chr13:8232644-8232793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
80-228
               

               
Cow position:
               
chr13:48165830-48165970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
88-217
               

               
Cow position:
               
chr13:30809465-30809594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
14, 38
               

               
Conread position:
               
90-221
               

               
Cow position:
               
chr13:21012875-21012744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
12, 124
               

               
Conread position:
               
97-216
               

               
Cow position:
               
chr13:52188850-52188728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
104-228
               

               
Cow position:
               
chr13:24645093-24644976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               
Show alignments to all cow chromosomes.