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Cow genome map

           
Conread name:
           
rmcp03c_e14.y1
        

               
Conread position:
               
1-123
               

               
Cow position:
               
chr17:39736206-39736329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
1-125
               

               
Cow position:
               
chr17:21758111-21757985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 120
               

               
Conread position:
               
1-125
               

               
Cow position:
               
chr17:35556882-35557005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr17:11478799-11478928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr17:29157449-29157575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-129
               

               
Cow position:
               
chr17:9911790-9911917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-131
               

               
Cow position:
               
chr17:5743261-5743129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
1-131
               

               
Cow position:
               
chr17:11368818-11368689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr17:23516912-23516778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 119
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr17:22017054-22016917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr17:13236310-13236170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 117
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr17:5053705-5053849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr17:9713312-9713165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 121
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr17:15340724-15340573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr17:24554026-24554174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr17:29076053-29075906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr17:37430475-37430330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr17:24862488-24862681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr17:5423039-5422851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr17:12536435-12536247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr17:23101189-23100995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
20, 128
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr17:5350093-5349895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr17:28284998-28284807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
23, 85
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr17:24163070-24163266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr17:36864660-36864855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
23, 123
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr17:5372497-5372298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr17:6566510-6566718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 102
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr17:27440206-27440412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr17:946387-946592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr17:1040775-1040964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 113
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr17:5767937-5768130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr17:11912473-11912269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr17:26448575-26448779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr17:31037347-31037141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 129
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr17:31856703-31856908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr17:21114924-21114718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr17:36330927-36330729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr17:1562750-1562551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr17:7142891-7143097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 129
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr17:32349101-32349303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr17:43315256-43315050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
101, 25
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr17:21325362-21325585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr17:6318836-6318625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr17:18934290-18934499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr17:24883541-24883327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
22, 109
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr17:33288627-33288415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr17:37341007-37340788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 137
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr17:39606460-39606665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
23, 119
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr17:908771-908984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr17:1025795-1025590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr17:1634462-1634250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr17:3153544-3153324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr17:4105964-4105748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
23, 188
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr17:4121700-4121483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
23, 189
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr17:11832085-11831874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 127
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr17:14025881-14025663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 134
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr17:21973100-21972884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr17:35051632-35051864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
23, 138
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr17:35573782-35573991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr17:36275363-36275581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
23, 182
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr17:40355288-40355505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr17:40638977-40639191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr17:15664707-15664921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 137
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr17:24786993-24786780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 75
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr17:25511275-25511488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr17:26637829-26637610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
25, 128
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr17:29356210-29355997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr17:24587654-24587869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr17:30728534-30728754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
21, 137
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr17:32471751-32471543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
23, 128
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr17:25128323-25128105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr17:11101773-11101567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr17:5039017-5038804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr17:7959210-7959429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr17:11664555-11664327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 221
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr17:12289379-12289158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 139
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr17:12959136-12959347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr17:13922511-13922733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 124
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr17:25612120-25612338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 126
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr17:32138394-32138161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr17:9824699-9824920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 116
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr17:12019515-12019307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr17:20157637-20157860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr17:20848553-20848780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr17:29084204-29084422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr17:22127952-22128179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 149
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr17:3388856-3389091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr17:7803145-7802918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 138
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr17:21039587-21039812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr17:21806422-21806194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
28, 126
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr17:9965998-9965765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 143
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr17:15684539-15684762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
22, 131
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr17:17034979-17035203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr17:18766967-18766733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
21, 185
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr17:20929271-20929501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr17:21959658-21959423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr17:25126380-25126598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr17:25467017-25467245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr17:25616280-25616502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr17:32419086-32418859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 126
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr17:32989507-32989730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr17:32993593-32993369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr17:35149497-35149268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
107, 33
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr17:6423794-6424014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
23, 116
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr17:40276770-40276997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
23, 119
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr17:13414338-13414099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr17:33793196-33793415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr17:37816163-37815922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 98
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr17:15102864-15102625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
23, 229
               

               
Conread position:
               
2-116
               

               
Cow position:
               
chr17:42697325-42697441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
2-140
               

               
Cow position:
               
chr17:1410206-1410065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr17:12510943-12510749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
22, 62
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr17:24973973-24974183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr17:20090605-20090385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr17:7810723-7810502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr17:21472147-21471935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr17:42150422-42150639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
2-225
               

               
Cow position:
               
chr17:30713377-30713600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr17:24750944-24751169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr17:33933713-33933491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
27, 11
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr17:34791034-34790806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
3-134
               

               
Cow position:
               
chr17:42744488-42744624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
3-171
               

               
Cow position:
               
chr17:18109051-18108886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
3-173
               

               
Cow position:
               
chr17:27303936-27303769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr17:18473197-18473380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr17:10431945-10431736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr17:7132408-7132192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr17:25901232-25901444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr17:29715166-29714978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr17:14024598-14024388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr17:20022481-20022274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr17:26575196-26574978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr17:25473248-25473037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 127
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr17:25514090-25513871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr17:1463298-1463077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr17:3577572-3577778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr17:17059457-17059669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr17:10508402-10508185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
20, 114
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr17:20932364-20932580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr17:24559323-24559544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr17:32333058-32332840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr17:11397700-11397921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr17:18818601-18818816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr17:21599650-21599427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr17:22076202-22076429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr17:36814394-36814619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr17:17044300-17044078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
21, 117
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr17:30501783-30501555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
21, 131
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr17:20800849-20801074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
116, 26
               

               
Conread position:
               
3-234
               

               
Cow position:
               
chr17:8815225-8815450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
99, 123
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr17:25800849-25800598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr17:29995402-29995193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
97, 134
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr17:33164781-33164576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
98, 10
               

               
Conread position:
               
4-227
               

               
Cow position:
               
chr17:4264257-4264480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
5-214
               

               
Cow position:
               
chr17:21363413-21363626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
23, 119
               

               
Conread position:
               
6-160
               

               
Cow position:
               
chr17:35338886-35338725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
6-211
               

               
Cow position:
               
chr17:13244010-13243814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
6-211
               

               
Cow position:
               
chr17:24004407-24004613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr17:40412618-40412823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
18, 130
               

               
Conread position:
               
6-216
               

               
Cow position:
               
chr17:40331802-40332024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
6-218
               

               
Cow position:
               
chr17:16446401-16446179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
17, 88
               

               
Conread position:
               
6-220
               

               
Cow position:
               
chr17:10414533-10414744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
6-221
               

               
Cow position:
               
chr17:3097622-3097389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 199
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr17:16868233-16868023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr17:18201792-18202013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr17:26757413-26757186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 137
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr17:27058522-27058292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr17:29026106-29026330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 205
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr17:33155119-33154901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
96, 124
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr17:13940287-13940058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr17:26818423-26818214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
6-248
               

               
Cow position:
               
chr17:5288201-5288444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
7-134
               

               
Cow position:
               
chr17:17406171-17406302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
17, 59
               

               
Conread position:
               
7-152
               

               
Cow position:
               
chr17:32273651-32273501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
7-167
               

               
Cow position:
               
chr17:18495481-18495323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
7-195
               

               
Cow position:
               
chr17:40852009-40852192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 16
               

               
Conread position:
               
7-208
               

               
Cow position:
               
chr17:22056992-22056778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
16, 173
               

               
Conread position:
               
7-211
               

               
Cow position:
               
chr17:20072063-20071863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 124
               

               
Conread position:
               
8-221
               

               
Cow position:
               
chr17:7571140-7571356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
15, 132
               

               
Conread position:
               
8-222
               

               
Cow position:
               
chr17:21718960-21718746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 128
               

               
Conread position:
               
12-205
               

               
Cow position:
               
chr17:18776144-18775955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
90, 15
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr17:20359155-20359363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr17:24895114-24895329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
13, 178
               

               
Conread position:
               
12-223
               

               
Cow position:
               
chr17:15334450-15334242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
14-228
               

               
Cow position:
               
chr17:3467795-3468005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
8, 113
               

               
Conread position:
               
15-199
               

               
Cow position:
               
chr17:24767243-24767060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
87, 105
               

               
Conread position:
               
15-205
               

               
Cow position:
               
chr17:43859842-43860026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
175, 83
               

               
Conread position:
               
15-215
               

               
Cow position:
               
chr17:20836139-20836334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
17-226
               

               
Cow position:
               
chr17:30513957-30513757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
18-222
               

               
Cow position:
               
chr17:19471723-19471524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
89, 120
               

               
Conread position:
               
19-173
               

               
Cow position:
               
chr17:25097504-25097655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 101
               

               
Conread position:
               
19-228
               

               
Cow position:
               
chr17:3387766-3387978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
83, 101
               

               
Conread position:
               
20-213
               

               
Cow position:
               
chr17:1282208-1282025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 18
               

               
Conread position:
               
21-165
               

               
Cow position:
               
chr17:24789872-24790022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
21-169
               

               
Cow position:
               
chr17:5837915-5837767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
6, 27
               

               
Conread position:
               
21-190
               

               
Cow position:
               
chr17:25348419-25348587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
80, 100
               

               
Conread position:
               
21-194
               

               
Cow position:
               
chr17:21335510-21335328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
81, 7
               

               
Conread position:
               
21-200
               

               
Cow position:
               
chr17:5027409-5027235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
21-210
               

               
Cow position:
               
chr17:9078170-9077974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
21-211
               

               
Cow position:
               
chr17:21466212-21466018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
21-214
               

               
Cow position:
               
chr17:15728524-15728712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
80, 102
               

               
Conread position:
               
21-215
               

               
Cow position:
               
chr17:12215207-12215009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 118
               

               
Conread position:
               
21-215
               

               
Cow position:
               
chr17:22051539-22051346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
81, 100
               

               
Conread position:
               
21-216
               

               
Cow position:
               
chr17:12325714-12325525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
80, 99
               

               
Conread position:
               
21-219
               

               
Cow position:
               
chr17:21676941-21677140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
79, 105
               

               
Conread position:
               
21-220
               

               
Cow position:
               
chr17:44234301-44234495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
81, 103
               

               
Conread position:
               
21-221
               

               
Cow position:
               
chr17:30900362-30900565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 11
               

               
Conread position:
               
21-222
               

               
Cow position:
               
chr17:9932249-9932060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
80, 89
               

               
Conread position:
               
21-223
               

               
Cow position:
               
chr17:24824293-24824500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
80, 168
               

               
Conread position:
               
21-227
               

               
Cow position:
               
chr17:10016330-10016532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 65
               

               
Conread position:
               
21-234
               

               
Cow position:
               
chr17:43323494-43323283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
87, 99
               

               
Conread position:
               
22-199
               

               
Cow position:
               
chr17:26789471-26789643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
78, 99
               

               
Conread position:
               
22-209
               

               
Cow position:
               
chr17:32143139-32143327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
80, 6
               

               
Conread position:
               
22-211
               

               
Cow position:
               
chr17:17222392-17222583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
80, 184
               

               
Conread position:
               
22-211
               

               
Cow position:
               
chr17:20884575-20884765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
85, 118
               

               
Conread position:
               
22-211
               

               
Cow position:
               
chr17:39963929-39964118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
91, 76
               

               
Conread position:
               
22-212
               

               
Cow position:
               
chr17:10222158-10221966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
106, 117
               

               
Conread position:
               
22-214
               

               
Cow position:
               
chr17:27429617-27429799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
80, 104
               

               
Conread position:
               
22-215
               

               
Cow position:
               
chr17:20306378-20306577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
22-215
               

               
Cow position:
               
chr17:25584294-25584490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
22-217
               

               
Cow position:
               
chr17:32278856-32278658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
22-217
               

               
Cow position:
               
chr17:32280716-32280914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
22-218
               

               
Cow position:
               
chr17:35043872-35043688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
22-221
               

               
Cow position:
               
chr17:19898942-19899149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
45, 200
               

               
Conread position:
               
22-222
               

               
Cow position:
               
chr17:11985826-11985634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
69, 90
               

               
Conread position:
               
22-222
               

               
Cow position:
               
chr17:15354983-15355186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
80, 98
               

               
Conread position:
               
22-222
               

               
Cow position:
               
chr17:25117936-25118135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 124
               

               
Conread position:
               
22-226
               

               
Cow position:
               
chr17:25139315-25139532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
22-227
               

               
Cow position:
               
chr17:5344669-5344877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
80, 165
               

               
Conread position:
               
22-227
               

               
Cow position:
               
chr17:25342689-25342484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
83, 78
               

               
Conread position:
               
22-228
               

               
Cow position:
               
chr17:6786988-6787197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
22-229
               

               
Cow position:
               
chr17:4817580-4817789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
87, 25
               

               
Conread position:
               
22-233
               

               
Cow position:
               
chr17:26225079-26225294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
80, 104
               

               
Conread position:
               
22-242
               

               
Cow position:
               
chr17:12946297-12946089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
23-207
               

               
Cow position:
               
chr17:7711490-7711672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
77, 93
               

               
Conread position:
               
23-220
               

               
Cow position:
               
chr17:22081463-22081274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
23-230
               

               
Cow position:
               
chr17:31559622-31559832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
23-235
               

               
Cow position:
               
chr17:3364645-3364854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
53, 5
               

               
Conread position:
               
24-126
               

               
Cow position:
               
chr17:12591228-12591332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
24-179
               

               
Cow position:
               
chr17:9697628-9697472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
77, 96
               

               
Conread position:
               
24-199
               

               
Cow position:
               
chr17:24773732-24773904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
24-215
               

               
Cow position:
               
chr17:10825534-10825720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
78, 97
               

               
Conread position:
               
27-211
               

               
Cow position:
               
chr17:1081261-1081448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
27-215
               

               
Cow position:
               
chr17:40384151-40383962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
75, 45
               

               
Conread position:
               
27-225
               

               
Cow position:
               
chr17:7037567-7037367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
85, 184
               

               
Conread position:
               
27-226
               

               
Cow position:
               
chr17:21181508-21181712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
81, 94
               

               
Conread position:
               
28-133
               

               
Cow position:
               
chr17:21206445-21206339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 93
               

               
Conread position:
               
28-194
               

               
Cow position:
               
chr17:31754717-31754549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
28-197
               

               
Cow position:
               
chr17:8137463-8137628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 100
               

               
Conread position:
               
28-202
               

               
Cow position:
               
chr17:21777784-21777959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
28-210
               

               
Cow position:
               
chr17:9950601-9950417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
28-211
               

               
Cow position:
               
chr17:20905041-20904867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
28-211
               

               
Cow position:
               
chr17:28795925-28795740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
28-215
               

               
Cow position:
               
chr17:27292399-27292210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
81, 98
               

               
Conread position:
               
28-215
               

               
Cow position:
               
chr17:35457758-35457574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr17:8663562-8663759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
74, 66
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr17:9509938-9509744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
74, 151
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr17:15303918-15303722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 46
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr17:15883729-15883925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
74, 188
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr17:18146243-18146441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr17:18720389-18720198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr17:27795712-27795904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr17:32220828-32220631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
51, 93
               

               
Conread position:
               
28-226
               

               
Cow position:
               
chr17:25122186-25121989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 93
               

               
Conread position:
               
28-230
               

               
Cow position:
               
chr17:5011897-5012104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
74, 8
               

               
Conread position:
               
28-234
               

               
Cow position:
               
chr17:37095981-37096193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
28-238
               

               
Cow position:
               
chr17:17180101-17180314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 93
               

               
Conread position:
               
29-192
               

               
Cow position:
               
chr17:8823371-8823544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
29-207
               

               
Cow position:
               
chr17:20992983-20992802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
29-215
               

               
Cow position:
               
chr17:25875454-25875641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
178, 108
               

               
Conread position:
               
29-218
               

               
Cow position:
               
chr17:11056101-11055919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
181, 54
               

               
Conread position:
               
29-226
               

               
Cow position:
               
chr17:40741711-40741908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 110
               

               
Conread position:
               
29-228
               

               
Cow position:
               
chr17:11839781-11839983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
71, 92
               

               
Conread position:
               
29-230
               

               
Cow position:
               
chr17:12306338-12306144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
95, 105
               

               
Conread position:
               
29-242
               

               
Cow position:
               
chr17:33275691-33275490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 91
               

               
Conread position:
               
30-207
               

               
Cow position:
               
chr17:5693595-5693420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 84
               

               
Conread position:
               
30-208
               

               
Cow position:
               
chr17:1466357-1466179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 109
               

               
Conread position:
               
30-211
               

               
Cow position:
               
chr17:6761788-6761614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
30-211
               

               
Cow position:
               
chr17:41616794-41616979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
30-228
               

               
Cow position:
               
chr17:21738814-21738606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
30-229
               

               
Cow position:
               
chr17:11080793-11080589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 194
               

               
Conread position:
               
31-194
               

               
Cow position:
               
chr17:45296472-45296629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
68, 62
               

               
Conread position:
               
31-215
               

               
Cow position:
               
chr17:11921104-11920918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
31-226
               

               
Cow position:
               
chr17:24987267-24987456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 31
               

               
Conread position:
               
34-215
               

               
Cow position:
               
chr17:40673434-40673619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
72, 56
               

               
Conread position:
               
34-220
               

               
Cow position:
               
chr17:21003762-21003582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
34-222
               

               
Cow position:
               
chr17:12963543-12963363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 61
               

               
Conread position:
               
34-244
               

               
Cow position:
               
chr17:31563624-31563410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
36-186
               

               
Cow position:
               
chr17:20270017-20270170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
36-211
               

               
Cow position:
               
chr17:22189501-22189671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
36-211
               

               
Cow position:
               
chr17:32027386-32027207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
70, 105
               

               
Conread position:
               
36-212
               

               
Cow position:
               
chr17:33288413-33288250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
65, 73
               

               
Conread position:
               
36-212
               

               
Cow position:
               
chr17:41429521-41429350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
65, 80
               

               
Conread position:
               
36-220
               

               
Cow position:
               
chr17:18883693-18883519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
36-222
               

               
Cow position:
               
chr17:26183410-26183598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 101
               

               
Conread position:
               
36-225
               

               
Cow position:
               
chr17:20881743-20881564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
62, 85
               

               
Conread position:
               
36-227
               

               
Cow position:
               
chr17:19544167-19543977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
5, 52
               

               
Conread position:
               
36-228
               

               
Cow position:
               
chr17:5280589-5280392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 106
               

               
Conread position:
               
36-228
               

               
Cow position:
               
chr17:10454520-10454325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
83, 106
               

               
Conread position:
               
36-228
               

               
Cow position:
               
chr17:21236588-21236785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
73, 90
               

               
Conread position:
               
36-228
               

               
Cow position:
               
chr17:36468125-36467930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 132
               

               
Conread position:
               
37-220
               

               
Cow position:
               
chr17:31231894-31231707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
37-228
               

               
Cow position:
               
chr17:2729846-2729659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
65, 35
               

               
Conread position:
               
40-194
               

               
Cow position:
               
chr17:24757597-24757746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
40-209
               

               
Cow position:
               
chr17:26231024-26231203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
41-183
               

               
Cow position:
               
chr17:3371688-3371834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
41-218
               

               
Cow position:
               
chr17:34948705-34948884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
70, 88
               

               
Conread position:
               
41-222
               

               
Cow position:
               
chr17:11618655-11618836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 173
               

               
Conread position:
               
41-222
               

               
Cow position:
               
chr17:40771903-40772080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
59, 41
               

               
Conread position:
               
41-231
               

               
Cow position:
               
chr17:32978862-32978674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
179, 95
               

               
Conread position:
               
42-215
               

               
Cow position:
               
chr17:6767189-6767013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
42-216
               

               
Cow position:
               
chr17:13297452-13297630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
77, 99
               

               
Conread position:
               
42-221
               

               
Cow position:
               
chr17:31480966-31480779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
94, 60
               

               
Conread position:
               
42-228
               

               
Cow position:
               
chr17:24898272-24898462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 106
               

               
Conread position:
               
42-228
               

               
Cow position:
               
chr17:28468195-28468386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
42-244
               

               
Cow position:
               
chr17:30977092-30977291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 79
               

               
Conread position:
               
43-211
               

               
Cow position:
               
chr17:33321896-33321727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
43-215
               

               
Cow position:
               
chr17:9854049-9854226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
43-220
               

               
Cow position:
               
chr17:15103667-15103493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 77
               

               
Conread position:
               
43-227
               

               
Cow position:
               
chr17:5048002-5048186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
5, 96
               

               
Conread position:
               
43-227
               

               
Cow position:
               
chr17:9260539-9260355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
59, 83
               

               
Conread position:
               
44-220
               

               
Cow position:
               
chr17:5898453-5898276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
46-215
               

               
Cow position:
               
chr17:27565635-27565807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
47-203
               

               
Cow position:
               
chr17:43717261-43717108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
47-220
               

               
Cow position:
               
chr17:9770580-9770756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
60, 55
               

               
Conread position:
               
47-223
               

               
Cow position:
               
chr17:15333602-15333429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
47-228
               

               
Cow position:
               
chr17:17782132-17782309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 90
               

               
Conread position:
               
47-230
               

               
Cow position:
               
chr17:17266058-17265874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
47-259
               

               
Cow position:
               
chr17:24111525-24111311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
55, 90
               

               
Conread position:
               
48-214
               

               
Cow position:
               
chr17:36791204-36791367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
51-181
               

               
Cow position:
               
chr17:38483716-38483586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
51, 70
               

               
Conread position:
               
53-228
               

               
Cow position:
               
chr17:27606600-27606770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
53-229
               

               
Cow position:
               
chr17:24116689-24116872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
55-218
               

               
Cow position:
               
chr17:26849685-26849521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 129
               

               
Conread position:
               
55-229
               

               
Cow position:
               
chr17:34187961-34188138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
58-207
               

               
Cow position:
               
chr17:25345556-25345709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
58-210
               

               
Cow position:
               
chr17:32008463-32008314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
58-215
               

               
Cow position:
               
chr17:24612739-24612889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 9
               

               
Conread position:
               
58-218
               

               
Cow position:
               
chr17:25352285-25352453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 130
               

               
Conread position:
               
58-222
               

               
Cow position:
               
chr17:14668590-14668755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
58-222
               

               
Cow position:
               
chr17:17193573-17193741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
58-222
               

               
Cow position:
               
chr17:17822178-17822339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
57, 39
               

               
Conread position:
               
60-194
               

               
Cow position:
               
chr17:34806577-34806440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
60-210
               

               
Cow position:
               
chr17:3541799-3541947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 66
               

               
Conread position:
               
60-221
               

               
Cow position:
               
chr17:10630893-10630730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
60-222
               

               
Cow position:
               
chr17:22241094-22241259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
60-228
               

               
Cow position:
               
chr17:31985851-31985691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
63-228
               

               
Cow position:
               
chr17:26562047-26561879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 77
               

               
Conread position:
               
64-199
               

               
Cow position:
               
chr17:21910438-21910303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
64-211
               

               
Cow position:
               
chr17:7864918-7865065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
64-216
               

               
Cow position:
               
chr17:18673946-18673790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
65-215
               

               
Cow position:
               
chr17:8809410-8809264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
68-226
               

               
Cow position:
               
chr17:20783096-20782944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
71-215
               

               
Cow position:
               
chr17:22223816-22223958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
76-215
               

               
Cow position:
               
chr17:24334553-24334692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 50
               

               
Conread position:
               
76-218
               

               
Cow position:
               
chr17:35140759-35140608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
26, 126
               

               
Conread position:
               
78-223
               

               
Cow position:
               
chr17:20930411-20930555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
87-228
               

               
Cow position:
               
chr17:4271246-4271100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
95-229
               

               
Cow position:
               
chr17:42744616-42744752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
135-231
               

               
Cow position:
               
chr17:22048594-22048499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               
Show alignments to all cow chromosomes.