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Cow genome map

           
Conread name:
           
rmcp03c_e14.y1
        

               
Conread position:
               
1-109
               

               
Cow position:
               
chr2:48864001-48863891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-115
               

               
Cow position:
               
chr2:38747649-38747764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 108
               

               
Conread position:
               
1-118
               

               
Cow position:
               
chr2:48361562-48361682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-121
               

               
Cow position:
               
chr2:58035097-58035220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr2:59427440-59427563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
1-123
               

               
Cow position:
               
chr2:17444786-17444912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr2:14089783-14089911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr2:45567913-45567788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 117
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr2:40466625-40466753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr2:46247471-46247343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr2:44222814-44222949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr2:72183502-72183366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr2:40880061-40880200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-142
               

               
Cow position:
               
chr2:74260448-74260588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr2:40403037-40402889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr2:47624416-47624271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr2:44217918-44217770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 29
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr2:59952869-59952719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr2:70704248-70704398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr2:39584439-39584589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr2:68870684-68870847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr2:26806123-26805948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr2:54971166-54971340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 124
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr2:46262431-46262606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 120
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr2:61815808-61815636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
23, 33
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr2:43790090-43790267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
21, 130
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr2:1762785-1762960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 46
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr2:46014756-46014940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
22, 138
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr2:39513457-39513644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 123
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr2:82139125-82138942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr2:63074862-63074678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr2:10439829-10440015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
23, 115
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr2:43835570-43835373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr2:16669458-16669658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 120
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr2:39750105-39750304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr2:17492526-17492330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr2:45542409-45542213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr2:69350575-69350379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr2:44170549-44170749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr2:70847272-70847070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
22, 129
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr2:15597485-15597287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr2:16505486-16505274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
22, 185
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr2:43624544-43624344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr2:85459921-85460118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
100, 23
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr2:49717098-49716889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr2:38640313-38640516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr2:44168058-44168261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr2:1708963-1709167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr2:3739855-3739642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr2:47879231-47879435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr2:53501045-53500846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr2:59397063-59396851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr2:61562037-61561832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr2:66149315-66149515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr2:80177597-80177398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr2:84480511-84480299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr2:19494204-19494417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr2:46316862-46317076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr2:54654624-54654410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
101, 137
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:994375-994168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:1073510-1073725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:2485835-2486050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:2827733-2827948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 77
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:7194201-7194414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:8138911-8139124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:9063264-9063471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:13354666-13354886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 181
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:29734815-29735030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
112, 39
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:37009400-37009610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:37619924-37619706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
21, 153
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:38362375-38362175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:40373408-40373203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:43444584-43444814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 141
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:45499212-45498999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:46120650-46120441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
100, 25
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:46227450-46227669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:47753618-47753392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:58686916-58687138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:64323228-64323442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 111
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:69419595-69419386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 130
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr2:76861466-76861247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr2:387786-387570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr2:28330757-28330546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
23, 91
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr2:46189106-46188892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr2:50905720-50905497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr2:64773375-64773606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
22, 177
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr2:79837736-79837518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr2:16428406-16428195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr2:17940296-17940081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr2:45596973-45597186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr2:58153695-58153909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr2:5604515-5604727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr2:17114738-17114535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
100, 20
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr2:31783920-31784135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr2:59592775-59592561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr2:67479964-67480193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 225
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr2:54967998-54968220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 115
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr2:20947363-20947578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr2:24530358-24530573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
22, 127
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr2:40728340-40728569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr2:44051301-44051518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr2:82116080-82116296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:7573514-7573312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:14826266-14826493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:14847857-14848061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
208, 8
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:16487977-16488200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
22, 172
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:17841998-17841784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 94
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:19212065-19211847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:21003164-21003379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:21327208-21327419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
109, 11
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:42183362-42183574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:42608056-42608274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:44191470-44191708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:45784727-45784961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 196
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:46019634-46019405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:46343154-46342939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:47070697-47070920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:47978055-47977832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 140
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:53491461-53491251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 123
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:53650014-53650225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
28, 92
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:57802499-57802273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 183
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:58074354-58074135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:69199329-69199113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr2:11656882-11657099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 29
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr2:45624004-45624244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr2:56003227-56003447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 129
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr2:33554180-33553963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr2:80275303-80275079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr2:30351716-30351486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr2:40488802-40489017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
100, 23
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr2:45478607-45478384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr2:45575013-45574793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
101, 83
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr2:8821222-8821460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr2:38837527-38837296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 14
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr2:62744018-62743792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:6039003-6039234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 119
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:13672514-13672733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:14634174-14634400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:25922400-25922629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:32988555-32988785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 216
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:40257422-40257199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:43591383-43591157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:43990762-43990986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
22, 134
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:43994925-43995148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:44007409-44007644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
23, 143
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:46161947-46162169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:46745913-46746153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:60091443-60091219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:73353787-73354023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:75227191-75227420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
23, 123
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr2:85794978-85794751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
23, 12
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr2:16847174-16847403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
10, 14
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr2:21410209-21410448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr2:55496305-55496071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr2:15298529-15298756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr2:40703676-40703449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr2:69579689-69579452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr2:24634870-24635092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 116
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr2:82957668-82957906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr2:22042526-22042778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:22371962-22371721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
21, 121
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr2:46351792-46351544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr2:38965610-38965857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
2-145
               

               
Cow position:
               
chr2:42927459-42927314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
22, 78
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr2:64212564-64212365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 10
               

               
Conread position:
               
2-202
               

               
Cow position:
               
chr2:72527952-72528153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr2:79966-79761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr2:992146-992356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
25, 109
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr2:13684690-13684894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 111
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr2:82580936-82580732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr2:65587147-65587366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
21, 128
               

               
Conread position:
               
2-225
               

               
Cow position:
               
chr2:85275504-85275285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr2:16839628-16839853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr2:40484517-40484285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr2:63250415-63250194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
3-122
               

               
Cow position:
               
chr2:69747623-69747502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
3-123
               

               
Cow position:
               
chr2:54789767-54789889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
3-129
               

               
Cow position:
               
chr2:54810860-54810736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
3-129
               

               
Cow position:
               
chr2:80963654-80963529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
3-134
               

               
Cow position:
               
chr2:61421176-61421043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 119
               

               
Conread position:
               
3-145
               

               
Cow position:
               
chr2:39798235-39798381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
3-164
               

               
Cow position:
               
chr2:19287089-19286932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
3-194
               

               
Cow position:
               
chr2:50352885-50353071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
21, 119
               

               
Conread position:
               
3-197
               

               
Cow position:
               
chr2:35948686-35948495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr2:57939673-57939874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr2:65931958-65932156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr2:1317892-1317691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 131
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr2:42801032-42801231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr2:45642492-45642297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr2:76313875-76313668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr2:21049335-21049136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 42
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr2:39334881-39334675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 120
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr2:1476403-1476608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr2:9726105-9725900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr2:83184147-83184374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr2:77941676-77941470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr2:827618-827416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr2:13001792-13002000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr2:70908332-70908129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr2:21382858-21382645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr2:44931267-44931052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
109, 11
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr2:50449917-50449704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr2:971817-972024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 9
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr2:33471995-33471788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr2:66095001-66094787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr2:44065570-44065773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr2:18589538-18589325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr2:23712864-23713088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 118
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr2:29121876-29122097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr2:54700449-54700666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr2:71622055-71621835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 52
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr2:15219105-15219321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
20, 119
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr2:19058146-19058367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr2:19137898-19137677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
21, 119
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr2:24218223-24218001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr2:56350924-56350696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr2:76562099-76562335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr2:46033328-46033551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr2:72315819-72315595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-233
               

               
Cow position:
               
chr2:41248563-41248787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
4-191
               

               
Cow position:
               
chr2:50565928-50566117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
4-194
               

               
Cow position:
               
chr2:61480582-61480774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr2:41088105-41087902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 8
               

               
Conread position:
               
4-220
               

               
Cow position:
               
chr2:11599419-11599629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
4-222
               

               
Cow position:
               
chr2:10628541-10628319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
5-219
               

               
Cow position:
               
chr2:7533774-7533573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
6-122
               

               
Cow position:
               
chr2:26102762-26102881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
6-126
               

               
Cow position:
               
chr2:549332-549212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
6-145
               

               
Cow position:
               
chr2:24434285-24434141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
6-205
               

               
Cow position:
               
chr2:56837661-56837458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 17
               

               
Conread position:
               
6-206
               

               
Cow position:
               
chr2:1422346-1422547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
6-212
               

               
Cow position:
               
chr2:78249734-78249940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
18, 47
               

               
Conread position:
               
6-214
               

               
Cow position:
               
chr2:12950170-12949961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
19, 130
               

               
Conread position:
               
6-214
               

               
Cow position:
               
chr2:71437383-71437174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
18, 124
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr2:16890058-16889853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
17, 35
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr2:34749989-34749787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 115
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr2:41008297-41008090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr2:80848078-80848287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
18, 114
               

               
Conread position:
               
6-216
               

               
Cow position:
               
chr2:14626587-14626806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
6-216
               

               
Cow position:
               
chr2:46053465-46053678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
6-218
               

               
Cow position:
               
chr2:39095351-39095562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 97
               

               
Conread position:
               
6-218
               

               
Cow position:
               
chr2:46164505-46164295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
6-220
               

               
Cow position:
               
chr2:46126140-46125927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr2:18997714-18997927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 121
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr2:32431740-32431524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
207, 94
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr2:46312435-46312647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
17, 116
               

               
Conread position:
               
6-224
               

               
Cow position:
               
chr2:6160348-6160137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 103
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr2:46137161-46136958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 70
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr2:41462429-41462211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 115
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr2:67302014-67302235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 7
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr2:29395014-29394790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
6-236
               

               
Cow position:
               
chr2:49428376-49428613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
7-116
               

               
Cow position:
               
chr2:47893921-47893809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
7-200
               

               
Cow position:
               
chr2:7453353-7453167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr2:46052496-46052719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
17, 26
               

               
Conread position:
               
7-231
               

               
Cow position:
               
chr2:57733430-57733650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
16, 126
               

               
Conread position:
               
8-145
               

               
Cow position:
               
chr2:25597498-25597360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
16, 108
               

               
Conread position:
               
8-186
               

               
Cow position:
               
chr2:45535463-45535640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
8-198
               

               
Cow position:
               
chr2:67386476-67386284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
94, 119
               

               
Conread position:
               
8-221
               

               
Cow position:
               
chr2:9543311-9543522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
9-219
               

               
Cow position:
               
chr2:33988319-33988098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr2:28301203-28301411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
15, 68
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr2:49467627-49467844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 130
               

               
Conread position:
               
10-127
               

               
Cow position:
               
chr2:78641253-78641369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
10-211
               

               
Cow position:
               
chr2:2491127-2490926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
10-219
               

               
Cow position:
               
chr2:12873411-12873615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
10-223
               

               
Cow position:
               
chr2:50353942-50354144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
10-244
               

               
Cow position:
               
chr2:26574761-26574987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
12-145
               

               
Cow position:
               
chr2:68488005-68487869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 110
               

               
Conread position:
               
12-187
               

               
Cow position:
               
chr2:81493596-81493424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
12-218
               

               
Cow position:
               
chr2:46968188-46967992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
14, 34
               

               
Conread position:
               
12-229
               

               
Cow position:
               
chr2:9936653-9936436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
117, 15
               

               
Conread position:
               
13-222
               

               
Cow position:
               
chr2:48837286-48837080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 127
               

               
Conread position:
               
13-242
               

               
Cow position:
               
chr2:41452235-41452466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
13, 126
               

               
Conread position:
               
14-215
               

               
Cow position:
               
chr2:5300603-5300802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
16-218
               

               
Cow position:
               
chr2:3553969-3554155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 31
               

               
Conread position:
               
16-218
               

               
Cow position:
               
chr2:4207563-4207362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
13, 115
               

               
Conread position:
               
16-228
               

               
Cow position:
               
chr2:66562037-66561823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
10, 113
               

               
Conread position:
               
16-230
               

               
Cow position:
               
chr2:46138496-46138274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
59, 179
               

               
Conread position:
               
17-148
               

               
Cow position:
               
chr2:42872335-42872468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 111
               

               
Conread position:
               
17-215
               

               
Cow position:
               
chr2:39368859-39369066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
84, 11
               

               
Conread position:
               
17-229
               

               
Cow position:
               
chr2:41422802-41423007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
19-215
               

               
Cow position:
               
chr2:39590266-39590459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
19-227
               

               
Cow position:
               
chr2:74070342-74070540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
20-210
               

               
Cow position:
               
chr2:46378785-46378593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
12, 109
               

               
Conread position:
               
20-215
               

               
Cow position:
               
chr2:76969171-76968960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
38, 5
               

               
Conread position:
               
20-218
               

               
Cow position:
               
chr2:46057992-46057805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
20-221
               

               
Cow position:
               
chr2:9476426-9476221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
24, 98
               

               
Conread position:
               
20-228
               

               
Cow position:
               
chr2:2031999-2031791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
21-124
               

               
Cow position:
               
chr2:42241322-42241218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
21-176
               

               
Cow position:
               
chr2:35207925-35208074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
6, 113
               

               
Conread position:
               
21-181
               

               
Cow position:
               
chr2:56339020-56338863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
80, 98
               

               
Conread position:
               
21-188
               

               
Cow position:
               
chr2:47443272-47443449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
21-194
               

               
Cow position:
               
chr2:77157334-77157164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
21-205
               

               
Cow position:
               
chr2:46202273-46202461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
21-207
               

               
Cow position:
               
chr2:13695230-13695042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
80, 89
               

               
Conread position:
               
21-211
               

               
Cow position:
               
chr2:39068299-39068479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
21-211
               

               
Cow position:
               
chr2:54931828-54931641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
79, 99
               

               
Conread position:
               
21-212
               

               
Cow position:
               
chr2:15871949-15872130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
81, 26
               

               
Conread position:
               
21-216
               

               
Cow position:
               
chr2:16686559-16686744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
21-218
               

               
Cow position:
               
chr2:17967018-17966835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
80, 100
               

               
Conread position:
               
21-223
               

               
Cow position:
               
chr2:39067508-39067708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
21-226
               

               
Cow position:
               
chr2:19164956-19164755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
79, 100
               

               
Conread position:
               
21-227
               

               
Cow position:
               
chr2:18243549-18243754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 105
               

               
Conread position:
               
21-227
               

               
Cow position:
               
chr2:37891480-37891267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
21-227
               

               
Cow position:
               
chr2:38658776-38658580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
81, 100
               

               
Conread position:
               
21-234
               

               
Cow position:
               
chr2:47595981-47595757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 204
               

               
Conread position:
               
22-158
               

               
Cow position:
               
chr2:46300623-46300763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
22-202
               

               
Cow position:
               
chr2:56102319-56102143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
22-205
               

               
Cow position:
               
chr2:51099963-51099780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
80, 108
               

               
Conread position:
               
22-208
               

               
Cow position:
               
chr2:11217804-11217999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
22-208
               

               
Cow position:
               
chr2:37347797-37347981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
22-209
               

               
Cow position:
               
chr2:37614953-37615142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 117
               

               
Conread position:
               
22-211
               

               
Cow position:
               
chr2:78379407-78379221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 113
               

               
Conread position:
               
22-212
               

               
Cow position:
               
chr2:13468227-13468417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 76
               

               
Conread position:
               
22-214
               

               
Cow position:
               
chr2:39642762-39642950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 148
               

               
Conread position:
               
22-215
               

               
Cow position:
               
chr2:14710108-14709923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 105
               

               
Conread position:
               
22-215
               

               
Cow position:
               
chr2:26500921-26500735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
78, 94
               

               
Conread position:
               
22-215
               

               
Cow position:
               
chr2:46614413-46614605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
97, 115
               

               
Conread position:
               
22-218
               

               
Cow position:
               
chr2:39363014-39363219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
22-220
               

               
Cow position:
               
chr2:9062689-9062888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
83, 78
               

               
Conread position:
               
22-220
               

               
Cow position:
               
chr2:65928830-65928631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 69
               

               
Conread position:
               
22-222
               

               
Cow position:
               
chr2:65059050-65059254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
22-226
               

               
Cow position:
               
chr2:26361766-26361976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
22-228
               

               
Cow position:
               
chr2:15348405-15348617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
22-228
               

               
Cow position:
               
chr2:35934892-35935105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 199
               

               
Conread position:
               
22-228
               

               
Cow position:
               
chr2:71486790-71486994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
80, 99
               

               
Conread position:
               
22-230
               

               
Cow position:
               
chr2:32840600-32840402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
22-231
               

               
Cow position:
               
chr2:51290346-51290137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 116
               

               
Conread position:
               
22-232
               

               
Cow position:
               
chr2:14218663-14218875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 78
               

               
Conread position:
               
22-235
               

               
Cow position:
               
chr2:13369666-13369879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
97, 194
               

               
Conread position:
               
23-199
               

               
Cow position:
               
chr2:59819794-59819624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
79, 95
               

               
Conread position:
               
23-211
               

               
Cow position:
               
chr2:70771867-70771678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
94, 30
               

               
Conread position:
               
23-222
               

               
Cow position:
               
chr2:6952481-6952679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
78, 71
               

               
Conread position:
               
23-222
               

               
Cow position:
               
chr2:67596007-67595803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
79, 115
               

               
Conread position:
               
23-222
               

               
Cow position:
               
chr2:69142526-69142716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
23-229
               

               
Cow position:
               
chr2:21949988-21950190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 98
               

               
Conread position:
               
23-231
               

               
Cow position:
               
chr2:60260979-60260767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
37, 142
               

               
Conread position:
               
23-234
               

               
Cow position:
               
chr2:12889819-12889606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
23-234
               

               
Cow position:
               
chr2:57776358-57776575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
24-145
               

               
Cow position:
               
chr2:47073201-47073323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
78, 97
               

               
Conread position:
               
24-164
               

               
Cow position:
               
chr2:46143143-46143279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
77, 97
               

               
Conread position:
               
24-205
               

               
Cow position:
               
chr2:54790295-54790476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
55, 92
               

               
Conread position:
               
24-211
               

               
Cow position:
               
chr2:8083610-8083798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
83, 157
               

               
Conread position:
               
24-227
               

               
Cow position:
               
chr2:30161875-30161670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
88, 116
               

               
Conread position:
               
24-228
               

               
Cow position:
               
chr2:34570988-34570785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 19
               

               
Conread position:
               
24-230
               

               
Cow position:
               
chr2:52484947-52484747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
27, 93
               

               
Conread position:
               
25-221
               

               
Cow position:
               
chr2:29343392-29343194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
94, 116
               

               
Conread position:
               
25-232
               

               
Cow position:
               
chr2:75462343-75462541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
74, 96
               

               
Conread position:
               
27-222
               

               
Cow position:
               
chr2:63568727-63568920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
75, 102
               

               
Conread position:
               
27-228
               

               
Cow position:
               
chr2:12139532-12139325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
28-174
               

               
Cow position:
               
chr2:24722253-24722105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
74, 93
               

               
Conread position:
               
28-181
               

               
Cow position:
               
chr2:47189530-47189683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 101
               

               
Conread position:
               
28-192
               

               
Cow position:
               
chr2:20791417-20791242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
28-202
               

               
Cow position:
               
chr2:47065126-47065303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
28-207
               

               
Cow position:
               
chr2:78669907-78669727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
28-209
               

               
Cow position:
               
chr2:55872503-55872321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 40
               

               
Conread position:
               
28-210
               

               
Cow position:
               
chr2:44215521-44215699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 53
               

               
Conread position:
               
28-214
               

               
Cow position:
               
chr2:39514053-39514241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 135
               

               
Conread position:
               
28-215
               

               
Cow position:
               
chr2:31355715-31355903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
28-218
               

               
Cow position:
               
chr2:38162781-38162593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
171, 106
               

               
Conread position:
               
28-219
               

               
Cow position:
               
chr2:37224088-37224279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
28-220
               

               
Cow position:
               
chr2:45522017-45521823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
28-220
               

               
Cow position:
               
chr2:46111035-46110836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr2:485594-485785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 101
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr2:1923867-1923671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 113
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr2:3128060-3127861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 115
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr2:21171622-21171811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr2:41040692-41040492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr2:44620604-44620800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
28-223
               

               
Cow position:
               
chr2:26694625-26694820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
54, 59
               

               
Conread position:
               
28-223
               

               
Cow position:
               
chr2:43474193-43474392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
28-224
               

               
Cow position:
               
chr2:65554786-65554588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
70, 138
               

               
Conread position:
               
28-227
               

               
Cow position:
               
chr2:41622499-41622703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
28-228
               

               
Cow position:
               
chr2:30954579-30954374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
74, 161
               

               
Conread position:
               
28-228
               

               
Cow position:
               
chr2:39566676-39566478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
133, 90
               

               
Conread position:
               
28-228
               

               
Cow position:
               
chr2:81913016-81913218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
28-230
               

               
Cow position:
               
chr2:16667955-16668152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
28-232
               

               
Cow position:
               
chr2:33251071-33250868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
110, 41
               

               
Conread position:
               
28-232
               

               
Cow position:
               
chr2:56937698-56937896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
90, 108
               

               
Conread position:
               
28-234
               

               
Cow position:
               
chr2:64465758-64465559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 93
               

               
Conread position:
               
28-243
               

               
Cow position:
               
chr2:46204534-46204749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 173
               

               
Conread position:
               
29-164
               

               
Cow position:
               
chr2:23120750-23120618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 91
               

               
Conread position:
               
29-178
               

               
Cow position:
               
chr2:45907569-45907719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 103
               

               
Conread position:
               
29-198
               

               
Cow position:
               
chr2:1141502-1141663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 34
               

               
Conread position:
               
29-211
               

               
Cow position:
               
chr2:53652870-53653053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
78, 66
               

               
Conread position:
               
29-215
               

               
Cow position:
               
chr2:39350470-39350284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
29-220
               

               
Cow position:
               
chr2:11435305-11435493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
73, 96
               

               
Conread position:
               
29-223
               

               
Cow position:
               
chr2:43131114-43131314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
29-225
               

               
Cow position:
               
chr2:55004306-55004495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
29-227
               

               
Cow position:
               
chr2:22759959-22759761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
73, 185
               

               
Conread position:
               
29-228
               

               
Cow position:
               
chr2:29681852-29682057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 55
               

               
Conread position:
               
29-228
               

               
Cow position:
               
chr2:44197893-44198095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
78, 188
               

               
Conread position:
               
30-212
               

               
Cow position:
               
chr2:36963542-36963722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 96
               

               
Conread position:
               
30-216
               

               
Cow position:
               
chr2:47018865-47019048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
71, 90
               

               
Conread position:
               
30-216
               

               
Cow position:
               
chr2:67047439-67047627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 53
               

               
Conread position:
               
30-222
               

               
Cow position:
               
chr2:24393680-24393481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
67, 110
               

               
Conread position:
               
30-228
               

               
Cow position:
               
chr2:12186650-12186843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
72, 91
               

               
Conread position:
               
30-228
               

               
Cow position:
               
chr2:12866353-12866146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
34, 109
               

               
Conread position:
               
30-228
               

               
Cow position:
               
chr2:15400928-15400730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 103
               

               
Conread position:
               
30-228
               

               
Cow position:
               
chr2:68998338-68998527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
72, 90
               

               
Conread position:
               
30-228
               

               
Cow position:
               
chr2:70449046-70449238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
31-199
               

               
Cow position:
               
chr2:47159968-47160136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 85
               

               
Conread position:
               
31-218
               

               
Cow position:
               
chr2:1364578-1364391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 109
               

               
Conread position:
               
31-218
               

               
Cow position:
               
chr2:54883490-54883674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
31-223
               

               
Cow position:
               
chr2:38953844-38954046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
31-228
               

               
Cow position:
               
chr2:37652269-37652469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 110
               

               
Conread position:
               
33-223
               

               
Cow position:
               
chr2:8576027-8576213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
34-176
               

               
Cow position:
               
chr2:39501063-39501201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
64, 87
               

               
Conread position:
               
34-197
               

               
Cow position:
               
chr2:13328980-13328821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
34-207
               

               
Cow position:
               
chr2:48785041-48784864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
35-222
               

               
Cow position:
               
chr2:78256315-78256503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
66, 85
               

               
Conread position:
               
36-211
               

               
Cow position:
               
chr2:80116123-80116297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 70
               

               
Conread position:
               
36-211
               

               
Cow position:
               
chr2:80961940-80961762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 103
               

               
Conread position:
               
36-215
               

               
Cow position:
               
chr2:2673557-2673734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 90
               

               
Conread position:
               
36-215
               

               
Cow position:
               
chr2:47403234-47403415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
76, 105
               

               
Conread position:
               
36-218
               

               
Cow position:
               
chr2:45484938-45484755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 107
               

               
Conread position:
               
36-218
               

               
Cow position:
               
chr2:46015945-46015767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
66, 90
               

               
Conread position:
               
36-219
               

               
Cow position:
               
chr2:81243937-81244122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
36-222
               

               
Cow position:
               
chr2:9416768-9416592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 96
               

               
Conread position:
               
36-226
               

               
Cow position:
               
chr2:66959701-66959892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
109, 89
               

               
Conread position:
               
36-229
               

               
Cow position:
               
chr2:65830311-65830116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
71, 94
               

               
Conread position:
               
36-230
               

               
Cow position:
               
chr2:22677218-22677419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 91
               

               
Conread position:
               
37-209
               

               
Cow position:
               
chr2:81293854-81294027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
65, 89
               

               
Conread position:
               
37-222
               

               
Cow position:
               
chr2:36124460-36124645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
37-226
               

               
Cow position:
               
chr2:44022779-44022584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 89
               

               
Conread position:
               
37-233
               

               
Cow position:
               
chr2:45619369-45619173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
64, 79
               

               
Conread position:
               
38-215
               

               
Cow position:
               
chr2:38647134-38646944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
39-230
               

               
Cow position:
               
chr2:65988127-65988311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
62, 82
               

               
Conread position:
               
40-216
               

               
Cow position:
               
chr2:24593897-24594066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
62, 102
               

               
Conread position:
               
40-223
               

               
Cow position:
               
chr2:37059139-37058958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 144
               

               
Conread position:
               
40-227
               

               
Cow position:
               
chr2:24669394-24669585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 101
               

               
Conread position:
               
40-228
               

               
Cow position:
               
chr2:42897695-42897886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
40-228
               

               
Cow position:
               
chr2:47194991-47195181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 88
               

               
Conread position:
               
40-230
               

               
Cow position:
               
chr2:70657218-70657415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 146
               

               
Conread position:
               
41-145
               

               
Cow position:
               
chr2:44032372-44032265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 81
               

               
Conread position:
               
41-160
               

               
Cow position:
               
chr2:29860033-29860150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
60, 80
               

               
Conread position:
               
41-174
               

               
Cow position:
               
chr2:16409503-16409636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 95
               

               
Conread position:
               
41-207
               

               
Cow position:
               
chr2:64473322-64473160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 111
               

               
Conread position:
               
41-211
               

               
Cow position:
               
chr2:26302656-26302477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
41-211
               

               
Cow position:
               
chr2:43139625-43139455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
41-213
               

               
Cow position:
               
chr2:1888637-1888474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
60, 75
               

               
Conread position:
               
41-214
               

               
Cow position:
               
chr2:6744178-6744001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
41-215
               

               
Cow position:
               
chr2:16481182-16481010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
41-215
               

               
Cow position:
               
chr2:21380371-21380200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
41-217
               

               
Cow position:
               
chr2:39663399-39663584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
61, 125
               

               
Conread position:
               
41-218
               

               
Cow position:
               
chr2:52466421-52466244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
63, 54
               

               
Conread position:
               
41-222
               

               
Cow position:
               
chr2:5755265-5755091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 79
               

               
Conread position:
               
41-222
               

               
Cow position:
               
chr2:40691558-40691745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
41-223
               

               
Cow position:
               
chr2:67745274-67745460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 13
               

               
Conread position:
               
41-228
               

               
Cow position:
               
chr2:40597600-40597792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 85
               

               
Conread position:
               
41-229
               

               
Cow position:
               
chr2:50913985-50913798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 85
               

               
Conread position:
               
41-230
               

               
Cow position:
               
chr2:2437574-2437388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
41-230
               

               
Cow position:
               
chr2:46222967-46222789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
173, 11
               

               
Conread position:
               
41-236
               

               
Cow position:
               
chr2:81480877-81481069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 88
               

               
Conread position:
               
42-211
               

               
Cow position:
               
chr2:55526742-55526574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
71, 90
               

               
Conread position:
               
42-215
               

               
Cow position:
               
chr2:17942989-17942807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
42-215
               

               
Cow position:
               
chr2:78116331-78116154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
71, 84
               

               
Conread position:
               
42-218
               

               
Cow position:
               
chr2:66629220-66629407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
42-221
               

               
Cow position:
               
chr2:7882433-7882611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 78
               

               
Conread position:
               
42-222
               

               
Cow position:
               
chr2:30127258-30127081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 96
               

               
Conread position:
               
42-222
               

               
Cow position:
               
chr2:39059115-39059286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 83
               

               
Conread position:
               
42-226
               

               
Cow position:
               
chr2:49345024-49345210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
60, 78
               

               
Conread position:
               
42-227
               

               
Cow position:
               
chr2:47165798-47165616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
60, 28
               

               
Conread position:
               
42-228
               

               
Cow position:
               
chr2:19025227-19025408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
60, 84
               

               
Conread position:
               
42-228
               

               
Cow position:
               
chr2:38913516-38913699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 88
               

               
Conread position:
               
42-228
               

               
Cow position:
               
chr2:59992220-59992031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 58
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr2:68328821-68328629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
60, 84
               

               
Conread position:
               
43-184
               

               
Cow position:
               
chr2:48199401-48199262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
58, 78
               

               
Conread position:
               
43-205
               

               
Cow position:
               
chr2:51624636-51624466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
43-211
               

               
Cow position:
               
chr2:64562906-64562737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 93
               

               
Conread position:
               
43-222
               

               
Cow position:
               
chr2:28872925-28873104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
59, 88
               

               
Conread position:
               
43-222
               

               
Cow position:
               
chr2:46130127-46129954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 78
               

               
Conread position:
               
43-228
               

               
Cow position:
               
chr2:61474066-61473867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
45-228
               

               
Cow position:
               
chr2:60181996-60181809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
47-209
               

               
Cow position:
               
chr2:12816667-12816833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
47-211
               

               
Cow position:
               
chr2:38884386-38884225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
47-214
               

               
Cow position:
               
chr2:61681533-61681699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
47-220
               

               
Cow position:
               
chr2:39483520-39483695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
47-221
               

               
Cow position:
               
chr2:74079075-74078906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
55, 43
               

               
Conread position:
               
47-226
               

               
Cow position:
               
chr2:30384231-30384049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
47-228
               

               
Cow position:
               
chr2:3773290-3773108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
54, 83
               

               
Conread position:
               
47-228
               

               
Cow position:
               
chr2:44313682-44313496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 91
               

               
Conread position:
               
48-227
               

               
Cow position:
               
chr2:19842826-19843001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
48-231
               

               
Cow position:
               
chr2:36937543-36937719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
49-209
               

               
Cow position:
               
chr2:59886735-59886893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
49-217
               

               
Cow position:
               
chr2:46152816-46152639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
51-228
               

               
Cow position:
               
chr2:65342422-65342241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 99
               

               
Conread position:
               
53-222
               

               
Cow position:
               
chr2:45895318-45895474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
54-215
               

               
Cow position:
               
chr2:16412568-16412411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
55-211
               

               
Cow position:
               
chr2:86490598-86490445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
55-229
               

               
Cow position:
               
chr2:73981677-73981845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 74
               

               
Conread position:
               
57-205
               

               
Cow position:
               
chr2:14313462-14313612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 63
               

               
Conread position:
               
57-222
               

               
Cow position:
               
chr2:46357876-46358038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 68
               

               
Conread position:
               
57-222
               

               
Cow position:
               
chr2:82303998-82304159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 76
               

               
Conread position:
               
58-211
               

               
Cow position:
               
chr2:79245447-79245601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 93
               

               
Conread position:
               
58-214
               

               
Cow position:
               
chr2:84750757-84750910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
44, 28
               

               
Conread position:
               
58-220
               

               
Cow position:
               
chr2:51024152-51023995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
58-221
               

               
Cow position:
               
chr2:74013023-74012858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 80
               

               
Conread position:
               
59-211
               

               
Cow position:
               
chr2:1036340-1036187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 67
               

               
Conread position:
               
59-221
               

               
Cow position:
               
chr2:75562056-75562217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 67
               

               
Conread position:
               
59-226
               

               
Cow position:
               
chr2:69003096-69003260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 68
               

               
Conread position:
               
62-215
               

               
Cow position:
               
chr2:3728078-3728227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 64
               
UCSC Genome Browser

               
Conread position:
               
63-211
               

               
Cow position:
               
chr2:46139373-46139526 (view  custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               
UCSC Genome Browser

               
               
               
Conread position:
63-215

               
               
               
Cow position:
chr2:77140527-77140378 (view  custom track)

               
               
               
Alignm length:
155

               
               
               
Alignm identity:
122

               
               
               
Alignm E-value:
2e-27

               
               
               
Alignm gaps (pig, cow):
39, 66
UCSC Genome Browser

               
               
               
Conread position:
63-218

               
               
               
Cow position:
chr2:1205357-1205513 (view  custom track)

               
               
               
Alignm length:
159

               
               
               
Alignm identity:
134

               
               
               
Alignm E-value:
7e-38

               
               
               
Alignm gaps (pig, cow):
38, 58

               
               
               Conread position:63-222
               
               
               Cow position:chr2:47230447-47230599 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:124
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):146, 52

               
               
               Conread position:63-222
               
               
               Cow position:chr2:67810989-67810829 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):39, 28

               
               
               Conread position:63-226
               
               
               Cow position:chr2:74198278-74198114 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:125
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):39, 152

               
               
               Conread position:64-222
               
               
               Cow position:chr2:39187425-39187582 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:128
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):37, 31

               
               
               Conread position:65-211
               
               
               Cow position:chr2:58336168-58336023 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:148
               
               
               Alignm identity:118
               
               
               Alignm E-value:9e-30
               
               
               Alignm gaps (pig, cow):48, 60

               
               
               Conread position:65-222
               
               
               Cow position:chr2:31410422-31410576 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:122
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):41, 35

               
               
               Conread position:65-256
               
               
               Cow position:chr2:23493855-23494040 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:139
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):37, 74

               
               
               Conread position:66-214
               
               
               Cow position:chr2:80877674-80877837 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:127
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):36, 0

               
               
               Conread position:67-218
               
               
               Cow position:chr2:21916679-21916525 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:156
               
               
               Alignm identity:117
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):42, 59

               
               
               Conread position:67-229
               
               
               Cow position:chr2:1777818-1777653 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:167
               
               
               Alignm identity:129
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):34, 59

               
               
               Conread position:68-211
               
               
               Cow position:chr2:24271276-24271414 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:109
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):34, 0

               
               
               Conread position:68-223
               
               
               Cow position:chr2:43577720-43577567 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:128
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):34, 58

               
               
               Conread position:71-207
               
               
               Cow position:chr2:68239264-68239397 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:107
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):31, 45

               
               
               Conread position:71-221
               
               
               Cow position:chr2:11806630-11806778 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:114
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):141, 47

               
               
               Conread position:71-229
               
               
               Cow position:chr2:46245400-46245242 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:123
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):30, 58

               
               
               Conread position:76-213
               
               
               Cow position:chr2:19598098-19598241 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:113
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:78-222
               
               
               Cow position:chr2:30394223-30394072 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:118
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):24, 0

               
               
               Conread position:83-207
               
               
               Cow position:chr2:55660799-55660919 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:126
               
               
               Alignm identity:102
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):19, 33

               
               
               Conread position:87-228
               
               
               Cow position:chr2:29806172-29806312 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:145
               
               
               Alignm identity:115
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):15, 39

               
               
               Conread position:90-218
               
               
               Cow position:chr2:39274858-39274991 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:134
               
               
               Alignm identity:111
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:99-250
               
               
               Cow position:chr2:50147466-50147614 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:118
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):37, 25

               
               
               Conread position:109-227
               
               
               Cow position:chr2:8354528-8354409 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:120
               
               
               Alignm identity:93
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:135-233
               
               
               Cow position:chr2:81758209-81758308 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:100
               
               
               Alignm identity:86
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):92, 0
Show alignments to all cow chromosomes.