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Cow genome map

           
Conread name:
           
rmcp03c_e14.y1
        

               
Conread position:
               
1-133
               

               
Cow position:
               
chr27:11466498-11466630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 110
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr27:16589735-16589882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr27:22348457-22348301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr27:1768658-1768831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr27:6674246-6674048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr27:23890905-23890707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr27:19685746-19685939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr27:23107937-23108131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
102, 25
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr27:435201-435001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 106
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr27:19660899-19660697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr27:30489443-30489660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr27:15409069-15409260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 120
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr27:26865151-26865344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 54
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr27:26323415-26323205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr27:25152052-25151850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr27:212924-212708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr27:237236-237009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
23, 72
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr27:8790774-8790985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 123
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr27:10404150-10404360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr27:10979830-10979617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr27:11982679-11982891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr27:23452428-23452220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr27:30868773-30868994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 147
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr27:15003011-15003223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr27:27055253-27055052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr27:26433840-26434059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr27:27389054-27389273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr27:426936-426722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr27:590795-591015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
23, 208
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr27:6162443-6162650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 124
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr27:18435166-18435377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr27:23594288-23594072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr27:23957483-23957271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
44, 23
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr27:26111947-26112166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
22, 144
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr27:27460605-27460825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr27:28206766-28206557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 37
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr27:29431431-29431225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr27:788830-789057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
25, 207
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr27:23510954-23510725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr27:7935189-7935408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr27:20897059-20897273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr27:17331463-17331239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr27:25809552-25809770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr27:29615009-29614789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr27:4944547-4944761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr27:15925313-15925091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 131
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr27:18882618-18882403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr27:19508980-19508757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr27:20584489-20584721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 55
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr27:28001845-28002058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 95
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr27:30890258-30890047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
23, 88
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr27:9977652-9977431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr27:11561743-11561520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr27:19452969-19452744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
22, 116
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr27:31210513-31210294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr27:23994453-23994671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr27:13204426-13204206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr27:30407070-30407305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
49, 223
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr27:15315484-15315266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr27:15865574-15865347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr27:20514786-20514567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr27:20828743-20828964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr27:17397487-17397712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr27:22035410-22035632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr27:26853393-26853612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr27:29593662-29593886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr27:31169143-31169368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 115
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr27:20517625-20517390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
23, 91
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr27:29319378-29319139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 155
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr27:19387985-19387756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr27:7343461-7343694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr27:12710215-12710027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
2-195
               

               
Cow position:
               
chr27:26238990-26238797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr27:14670416-14670628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 128
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr27:23485175-23484962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr27:27856298-27856086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr27:22220519-22220293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr27:299415-299629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr27:3518471-3518246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 213
               

               
Conread position:
               
2-228
               

               
Cow position:
               
chr27:8062384-8062612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr27:24440257-24440476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
2-231
               

               
Cow position:
               
chr27:6541598-6541375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 125
               

               
Conread position:
               
3-151
               

               
Cow position:
               
chr27:20812870-20812719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 143
               

               
Conread position:
               
3-185
               

               
Cow position:
               
chr27:20481401-20481573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
99, 49
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr27:20068013-20068196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
98, 9
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr27:28478544-28478363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr27:30455958-30455756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr27:6319884-6319679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
21, 119
               

               
Conread position:
               
3-211
               

               
Cow position:
               
chr27:7412357-7412150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr27:22171262-22171056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr27:22547434-22547638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr27:23560066-23560285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
21, 112
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr27:15454172-15453959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr27:19500269-19500490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr27:20629034-20628804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr27:28496407-28496623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 61
               

               
Conread position:
               
3-224
               

               
Cow position:
               
chr27:7649617-7649846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr27:22179805-22180025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr27:31170100-31170332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr27:2592508-2592279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 215
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr27:16103772-16103552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chr27:26400757-26400973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 123
               

               
Conread position:
               
5-166
               

               
Cow position:
               
chr27:26506705-26506545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
6-207
               

               
Cow position:
               
chr27:17102858-17102661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
6-210
               

               
Cow position:
               
chr27:19717877-19717656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
6-214
               

               
Cow position:
               
chr27:21669155-21669353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr27:27245392-27245608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
18, 189
               

               
Conread position:
               
6-216
               

               
Cow position:
               
chr27:26999460-26999671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
6-217
               

               
Cow position:
               
chr27:4720153-4720376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
6-218
               

               
Cow position:
               
chr27:24693375-24693168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
6-221
               

               
Cow position:
               
chr27:24223914-24223703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chr27:7212751-7212985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
6-228
               

               
Cow position:
               
chr27:15668809-15669034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
23, 111
               

               
Conread position:
               
7-209
               

               
Cow position:
               
chr27:12459245-12459047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
7-222
               

               
Cow position:
               
chr27:6106661-6106450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
7-222
               

               
Cow position:
               
chr27:26617367-26617160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
7-223
               

               
Cow position:
               
chr27:29597790-29598000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
17, 8
               

               
Conread position:
               
8-230
               

               
Cow position:
               
chr27:29164730-29164516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
9-222
               

               
Cow position:
               
chr27:28015774-28015988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
9-228
               

               
Cow position:
               
chr27:4398535-4398746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
10-228
               

               
Cow position:
               
chr27:27020143-27020352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
110, 19
               

               
Conread position:
               
11-213
               

               
Cow position:
               
chr27:624262-624464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
91, 75
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr27:19576367-19576577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
11, 125
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr27:19741452-19741645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 82
               

               
Conread position:
               
13-207
               

               
Cow position:
               
chr27:7425233-7425427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 119
               

               
Conread position:
               
13-218
               

               
Cow position:
               
chr27:23918085-23918284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
6, 90
               

               
Conread position:
               
13-222
               

               
Cow position:
               
chr27:31231126-31231332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 117
               

               
Conread position:
               
13-229
               

               
Cow position:
               
chr27:4544394-4544613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
14-222
               

               
Cow position:
               
chr27:26121710-26121500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
14-228
               

               
Cow position:
               
chr27:10581483-10581274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
16-193
               

               
Cow position:
               
chr27:23060160-23060341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
18-221
               

               
Cow position:
               
chr27:20048583-20048386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
91, 108
               

               
Conread position:
               
18-228
               

               
Cow position:
               
chr27:24358282-24358077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
20-181
               

               
Cow position:
               
chr27:21025633-21025480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 108
               

               
Conread position:
               
21-197
               

               
Cow position:
               
chr27:26504248-26504075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
21-208
               

               
Cow position:
               
chr27:27632655-27632833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
21-209
               

               
Cow position:
               
chr27:20325090-20324898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
21-214
               

               
Cow position:
               
chr27:8629925-8630120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
21-215
               

               
Cow position:
               
chr27:8962311-8962488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
82, 54
               

               
Conread position:
               
21-215
               

               
Cow position:
               
chr27:28062258-28062441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
21-222
               

               
Cow position:
               
chr27:11134032-11133833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
21-228
               

               
Cow position:
               
chr27:2949381-2949575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
80, 46
               

               
Conread position:
               
21-228
               

               
Cow position:
               
chr27:20486003-20485785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
81, 60
               

               
Conread position:
               
21-234
               

               
Cow position:
               
chr27:22386821-22386622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
22-197
               

               
Cow position:
               
chr27:27694827-27695004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
22-202
               

               
Cow position:
               
chr27:232499-232317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
82, 76
               

               
Conread position:
               
22-203
               

               
Cow position:
               
chr27:1184232-1184408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
80, 111
               

               
Conread position:
               
22-203
               

               
Cow position:
               
chr27:16705193-16705018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 6
               

               
Conread position:
               
22-207
               

               
Cow position:
               
chr27:29493955-29494137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
78, 98
               

               
Conread position:
               
22-214
               

               
Cow position:
               
chr27:20325296-20325111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
81, 104
               

               
Conread position:
               
22-215
               

               
Cow position:
               
chr27:18688464-18688659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
22-215
               

               
Cow position:
               
chr27:19933014-19932817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
22-218
               

               
Cow position:
               
chr27:26793838-26794035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
103, 115
               

               
Conread position:
               
22-222
               

               
Cow position:
               
chr27:10307355-10307557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
22-222
               

               
Cow position:
               
chr27:26437176-26437377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
100, 115
               

               
Conread position:
               
22-227
               

               
Cow position:
               
chr27:6241247-6241450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 105
               

               
Conread position:
               
22-227
               

               
Cow position:
               
chr27:11480691-11480897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 98
               

               
Conread position:
               
22-227
               

               
Cow position:
               
chr27:26226345-26226546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
91, 98
               

               
Conread position:
               
23-222
               

               
Cow position:
               
chr27:10598933-10598734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
113, 191
               

               
Conread position:
               
23-228
               

               
Cow position:
               
chr27:18791565-18791775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 121
               

               
Conread position:
               
24-218
               

               
Cow position:
               
chr27:1067511-1067326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
77, 88
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chr27:31004878-31004686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
78, 97
               

               
Conread position:
               
24-228
               

               
Cow position:
               
chr27:672612-672402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
25-228
               

               
Cow position:
               
chr27:18491498-18491307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
77, 112
               

               
Conread position:
               
25-231
               

               
Cow position:
               
chr27:21951036-21951243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 113
               

               
Conread position:
               
26-260
               

               
Cow position:
               
chr27:26980021-26980256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
83, 115
               

               
Conread position:
               
27-227
               

               
Cow position:
               
chr27:262278-262076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
27-232
               

               
Cow position:
               
chr27:24035336-24035540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
79, 100
               

               
Conread position:
               
28-199
               

               
Cow position:
               
chr27:23554390-23554560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
28-199
               

               
Cow position:
               
chr27:30996889-30997060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
108, 143
               

               
Conread position:
               
28-205
               

               
Cow position:
               
chr27:11993927-11994105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 133
               

               
Conread position:
               
28-208
               

               
Cow position:
               
chr27:31157751-31157570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
85, 110
               

               
Conread position:
               
28-211
               

               
Cow position:
               
chr27:27438567-27438751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
79, 30
               

               
Conread position:
               
28-211
               

               
Cow position:
               
chr27:27827911-27828099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 114
               

               
Conread position:
               
28-212
               

               
Cow position:
               
chr27:9956492-9956678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 113
               

               
Conread position:
               
28-214
               

               
Cow position:
               
chr27:26118439-26118251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 109
               

               
Conread position:
               
28-215
               

               
Cow position:
               
chr27:6925024-6924833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 98
               

               
Conread position:
               
28-218
               

               
Cow position:
               
chr27:23527252-23527065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
28-218
               

               
Cow position:
               
chr27:28931863-28932051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
74, 8
               

               
Conread position:
               
28-218
               

               
Cow position:
               
chr27:29249531-29249335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 136
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr27:16965518-16965323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr27:31515610-31515807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
28-228
               

               
Cow position:
               
chr27:15867328-15867130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
77, 13
               

               
Conread position:
               
28-228
               

               
Cow position:
               
chr27:18507589-18507385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
28-231
               

               
Cow position:
               
chr27:1353522-1353315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
79, 110
               

               
Conread position:
               
29-202
               

               
Cow position:
               
chr27:26909653-26909822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 97
               

               
Conread position:
               
29-205
               

               
Cow position:
               
chr27:22489215-22489036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
85, 118
               

               
Conread position:
               
29-216
               

               
Cow position:
               
chr27:29693416-29693219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
29-221
               

               
Cow position:
               
chr27:31386693-31386882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
73, 100
               

               
Conread position:
               
29-222
               

               
Cow position:
               
chr27:24240297-24240098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
29-228
               

               
Cow position:
               
chr27:29184899-29185102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 187
               

               
Conread position:
               
29-229
               

               
Cow position:
               
chr27:24303885-24303680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 159
               

               
Conread position:
               
29-229
               

               
Cow position:
               
chr27:29961641-29961835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
30-211
               

               
Cow position:
               
chr27:11208617-11208800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
30-228
               

               
Cow position:
               
chr27:30914946-30914744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
79, 11
               

               
Conread position:
               
31-199
               

               
Cow position:
               
chr27:23177377-23177543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
79, 5
               

               
Conread position:
               
31-215
               

               
Cow position:
               
chr27:27528884-27529061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
66, 100
               

               
Conread position:
               
32-222
               

               
Cow position:
               
chr27:27449950-27450138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
32-222
               

               
Cow position:
               
chr27:30797877-30798059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 89
               

               
Conread position:
               
34-215
               

               
Cow position:
               
chr27:3498484-3498309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
34-230
               

               
Cow position:
               
chr27:26940012-26939813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 105
               

               
Conread position:
               
35-228
               

               
Cow position:
               
chr27:27606364-27606554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
66, 102
               

               
Conread position:
               
36-182
               

               
Cow position:
               
chr27:23477877-23477734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
36-188
               

               
Cow position:
               
chr27:17908328-17908481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
36-198
               

               
Cow position:
               
chr27:22254726-22254560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
36-215
               

               
Cow position:
               
chr27:2957343-2957170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 90
               

               
Conread position:
               
37-207
               

               
Cow position:
               
chr27:12596707-12596543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 89
               

               
Conread position:
               
37-214
               

               
Cow position:
               
chr27:20283566-20283398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
37-220
               

               
Cow position:
               
chr27:26984092-26983911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 64
               

               
Conread position:
               
37-226
               

               
Cow position:
               
chr27:15434256-15434073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
38-210
               

               
Cow position:
               
chr27:29183287-29183468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
40-209
               

               
Cow position:
               
chr27:30444753-30444915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
40-223
               

               
Cow position:
               
chr27:31183503-31183316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
61, 160
               

               
Conread position:
               
40-237
               

               
Cow position:
               
chr27:31153630-31153824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 96
               

               
Conread position:
               
40-252
               

               
Cow position:
               
chr27:11145806-11145599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
41-210
               

               
Cow position:
               
chr27:18558287-18558116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
41-211
               

               
Cow position:
               
chr27:22748254-22748085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
60, 88
               

               
Conread position:
               
41-211
               

               
Cow position:
               
chr27:26087242-26087077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
60, 80
               

               
Conread position:
               
41-214
               

               
Cow position:
               
chr27:21101364-21101538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
41-219
               

               
Cow position:
               
chr27:28476187-28476359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
57, 84
               

               
Conread position:
               
41-222
               

               
Cow position:
               
chr27:16246728-16246552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 87
               

               
Conread position:
               
41-222
               

               
Cow position:
               
chr27:31498709-31498529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 144
               

               
Conread position:
               
42-222
               

               
Cow position:
               
chr27:20490456-20490271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 101
               

               
Conread position:
               
42-223
               

               
Cow position:
               
chr27:11528856-11528673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
43-212
               

               
Cow position:
               
chr27:178787-178619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 95
               

               
Conread position:
               
43-212
               

               
Cow position:
               
chr27:20081203-20081375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
5, 97
               

               
Conread position:
               
43-222
               

               
Cow position:
               
chr27:18873972-18873801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 83
               

               
Conread position:
               
45-216
               

               
Cow position:
               
chr27:21143146-21143326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
45-226
               

               
Cow position:
               
chr27:25000038-25000226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
46-221
               

               
Cow position:
               
chr27:22583668-22583490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
47-215
               

               
Cow position:
               
chr27:22102723-22102888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 73
               

               
Conread position:
               
48-210
               

               
Cow position:
               
chr27:31219184-31219031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
53, 73
               

               
Conread position:
               
50-219
               

               
Cow position:
               
chr27:18748992-18749171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
86, 51
               

               
Conread position:
               
50-222
               

               
Cow position:
               
chr27:19074105-19074279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 41
               

               
Conread position:
               
50-228
               

               
Cow position:
               
chr27:21661053-21660878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 88
               

               
Conread position:
               
55-211
               

               
Cow position:
               
chr27:20561494-20561345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
58-215
               

               
Cow position:
               
chr27:21447920-21448069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
58-227
               

               
Cow position:
               
chr27:26317975-26317805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
59-233
               

               
Cow position:
               
chr27:3698764-3698937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
60-214
               

               
Cow position:
               
chr27:27204524-27204683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
63-222
               

               
Cow position:
               
chr27:4486873-4487035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
63-227
               

               
Cow position:
               
chr27:22150790-22150951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
64-229
               

               
Cow position:
               
chr27:27012602-27012435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
64-229
               

               
Cow position:
               
chr27:28921989-28922157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
67-228
               

               
Cow position:
               
chr27:26467658-26467821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
67-230
               

               
Cow position:
               
chr27:24952052-24952215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 55
               

               
Conread position:
               
67-250
               

               
Cow position:
               
chr27:30441605-30441423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
72-212
               

               
Cow position:
               
chr27:23527606-23527743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 55
               
Show alignments to all cow chromosomes.