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Cow genome map

           
Conread name:
           
rmcp03c_e14.y1
        

               
Conread position:
               
1-111
               

               
Cow position:
               
chr29:18012545-18012657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-120
               

               
Cow position:
               
chr29:27329880-27330000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr29:5186506-5186378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr29:23243890-23243756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 8
               

               
Conread position:
               
1-134
               

               
Cow position:
               
chr29:34687822-34687957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr29:11527802-11527660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-145
               

               
Cow position:
               
chr29:21285347-21285493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr29:30548763-30548944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr29:29974027-29973838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 137
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr29:17154766-17154943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr29:22723588-22723778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr29:23825223-23825030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr29:29324433-29324234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr29:17804522-17804717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
23, 70
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr29:34358991-34358792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr29:44139256-44139053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 75
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr29:30681723-30681510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr29:40117559-40117762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr29:1325430-1325644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr29:32656104-32655896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr29:35677556-35677343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr29:36530854-36531064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
25, 131
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr29:38580967-38581190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr29:11434106-11434313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
22, 120
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr29:4492425-4492636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr29:7624166-7624367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr29:8926474-8926248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 197
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr29:10058548-10058341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr29:16290713-16290927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr29:19762258-19762465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr29:25737427-25737218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
23, 135
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr29:5063132-5063346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
23, 132
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr29:26778870-26779079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 33
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr29:29057166-29057382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr29:9378624-9378840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr29:31943853-31944070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
23, 129
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr29:35501667-35501460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
23, 119
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr29:38980087-38979875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 120
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr29:15947154-15947375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr29:36781317-36781104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
24, 126
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr29:732608-732817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr29:1011593-1011385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr29:21645305-21645525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr29:29769364-29769146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr29:31928976-31929195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr29:35458784-35458559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr29:40791297-40791504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr29:45005640-45005425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr29:4070615-4070832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr29:5409154-5408933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 134
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr29:5892832-5893055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 187
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr29:9709681-9709902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 127
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr29:17222400-17222626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 14
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr29:20770334-20770553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr29:22167091-22166878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 114
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr29:23142350-23142123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
20, 143
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr29:23220512-23220280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr29:31651398-31651611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
22, 102
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr29:31981818-31982029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr29:24624237-24624450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
101, 75
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr29:41112892-41112680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr29:23155215-23155444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr29:32656420-32656652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr29:13028431-13028663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
23, 35
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr29:12680143-12680372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr29:7290763-7290985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr29:8163840-8163610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr29:22613417-22613636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
23, 95
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr29:27668673-27668439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr29:28420743-28420969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr29:39038282-39038056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr29:22162262-22162048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
23, 108
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr29:35292079-35292307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
22, 125
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr29:4874896-4874664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr29:36210134-36210353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr29:41530838-41531062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
21, 125
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr29:18450147-18449921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
136, 12
               

               
Conread position:
               
2-227
               

               
Cow position:
               
chr29:1007810-1008036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
3-129
               

               
Cow position:
               
chr29:29176626-29176500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
98, 44
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr29:40633632-40633829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
21, 127
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr29:32197687-32197880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 10
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr29:21443348-21443151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr29:29308582-29308383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
21, 129
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr29:19363701-19363911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr29:19949299-19949522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr29:29189105-29188883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 11
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr29:34359831-34359609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
99, 117
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr29:22735116-22734885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr29:43099754-43099547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
4-216
               

               
Cow position:
               
chr29:42364026-42363815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 113
               

               
Conread position:
               
6-209
               

               
Cow position:
               
chr29:24188073-24187867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 134
               

               
Conread position:
               
6-211
               

               
Cow position:
               
chr29:3685527-3685323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
6-211
               

               
Cow position:
               
chr29:19176921-19176717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 128
               

               
Conread position:
               
6-211
               

               
Cow position:
               
chr29:26540548-26540342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 133
               

               
Conread position:
               
6-212
               

               
Cow position:
               
chr29:4120846-4121055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
6-214
               

               
Cow position:
               
chr29:19125314-19125531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
18, 115
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr29:1933579-1933366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 116
               

               
Conread position:
               
6-215
               

               
Cow position:
               
chr29:16278980-16279179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 42
               

               
Conread position:
               
6-218
               

               
Cow position:
               
chr29:8125367-8125155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
16, 111
               

               
Conread position:
               
6-218
               

               
Cow position:
               
chr29:17109952-17110158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
6-220
               

               
Cow position:
               
chr29:38858221-38858005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 160
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr29:10838938-10839148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr29:20167416-20167632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 171
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr29:22068748-22068531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr29:28066483-28066691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr29:22729560-22729780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr29:31934371-31934589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 121
               

               
Conread position:
               
6-231
               

               
Cow position:
               
chr29:2056053-2056276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 116
               

               
Conread position:
               
6-237
               

               
Cow position:
               
chr29:26275602-26275826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
7-213
               

               
Cow position:
               
chr29:22032649-22032447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
17, 123
               

               
Conread position:
               
7-215
               

               
Cow position:
               
chr29:28197013-28196816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
8-177
               

               
Cow position:
               
chr29:32176674-32176832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
8-208
               

               
Cow position:
               
chr29:7954973-7954769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 40
               

               
Conread position:
               
9-207
               

               
Cow position:
               
chr29:15796481-15796678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
9-211
               

               
Cow position:
               
chr29:26672916-26672701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr29:15797947-15798157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
15, 134
               

               
Conread position:
               
12-218
               

               
Cow position:
               
chr29:43088309-43088512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 36
               

               
Conread position:
               
14-227
               

               
Cow position:
               
chr29:14576859-14577072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
9, 107
               

               
Conread position:
               
15-199
               

               
Cow position:
               
chr29:7143302-7143485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
16-233
               

               
Cow position:
               
chr29:19741845-19742050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
17-214
               

               
Cow position:
               
chr29:21666090-21666287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 119
               

               
Conread position:
               
21-204
               

               
Cow position:
               
chr29:28840164-28840364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
21-212
               

               
Cow position:
               
chr29:12890693-12890875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
21-218
               

               
Cow position:
               
chr29:22028944-22028756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
21-222
               

               
Cow position:
               
chr29:26211060-26211265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
21-227
               

               
Cow position:
               
chr29:16657707-16657908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
81, 55
               

               
Conread position:
               
21-227
               

               
Cow position:
               
chr29:25288915-25288708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
81, 50
               

               
Conread position:
               
22-199
               

               
Cow position:
               
chr29:16609757-16609936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
22-200
               

               
Cow position:
               
chr29:23913384-23913210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
85, 99
               

               
Conread position:
               
22-207
               

               
Cow position:
               
chr29:8634663-8634846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 104
               

               
Conread position:
               
22-220
               

               
Cow position:
               
chr29:18878472-18878275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
87, 104
               

               
Conread position:
               
22-222
               

               
Cow position:
               
chr29:7955981-7955779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 60
               

               
Conread position:
               
22-222
               

               
Cow position:
               
chr29:17436760-17436956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 52
               

               
Conread position:
               
22-227
               

               
Cow position:
               
chr29:44684108-44684314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
22-233
               

               
Cow position:
               
chr29:4441193-4440985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
80, 6
               

               
Conread position:
               
23-145
               

               
Cow position:
               
chr29:17022160-17022284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
78, 98
               

               
Conread position:
               
23-182
               

               
Cow position:
               
chr29:14227569-14227724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
23-200
               

               
Cow position:
               
chr29:30206863-30206692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 82
               

               
Conread position:
               
23-228
               

               
Cow position:
               
chr29:40351065-40350866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
24-209
               

               
Cow position:
               
chr29:40763683-40763500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 92
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chr29:11227372-11227172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chr29:23697988-23698180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
24-222
               

               
Cow position:
               
chr29:24065697-24065894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
25-227
               

               
Cow position:
               
chr29:35737315-35737103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 165
               

               
Conread position:
               
26-211
               

               
Cow position:
               
chr29:26631053-26631247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
27-206
               

               
Cow position:
               
chr29:30440950-30441132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
27-218
               

               
Cow position:
               
chr29:28948988-28949190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 25
               

               
Conread position:
               
28-194
               

               
Cow position:
               
chr29:33393693-33393869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
28-207
               

               
Cow position:
               
chr29:26539250-26539425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 70
               

               
Conread position:
               
28-208
               

               
Cow position:
               
chr29:32894278-32894452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 99
               

               
Conread position:
               
28-212
               

               
Cow position:
               
chr29:19187041-19187225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
74, 92
               

               
Conread position:
               
28-215
               

               
Cow position:
               
chr29:2744252-2744065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
108, 72
               

               
Conread position:
               
28-215
               

               
Cow position:
               
chr29:14746795-14746982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
81, 98
               

               
Conread position:
               
28-215
               

               
Cow position:
               
chr29:39638859-39639042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 98
               

               
Conread position:
               
28-216
               

               
Cow position:
               
chr29:26602214-26602404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
28-218
               

               
Cow position:
               
chr29:17297151-17297343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
28-220
               

               
Cow position:
               
chr29:629553-629744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
74, 93
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr29:16200463-16200264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
28-222
               

               
Cow position:
               
chr29:32215724-32215913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
28-224
               

               
Cow position:
               
chr29:22577164-22576965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
28-226
               

               
Cow position:
               
chr29:31080175-31080376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
85, 92
               

               
Conread position:
               
28-228
               

               
Cow position:
               
chr29:14375866-14375661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
28-229
               

               
Cow position:
               
chr29:27961952-27961748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr29:3292964-3293138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
72, 90
               

               
Conread position:
               
29-215
               

               
Cow position:
               
chr29:38754923-38754734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 109
               

               
Conread position:
               
29-222
               

               
Cow position:
               
chr29:31489335-31489533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
29-229
               

               
Cow position:
               
chr29:32799695-32799485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
30-230
               

               
Cow position:
               
chr29:27997233-27997030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
108, 97
               

               
Conread position:
               
31-210
               

               
Cow position:
               
chr29:8798997-8798815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
71, 171
               

               
Conread position:
               
31-212
               

               
Cow position:
               
chr29:5520467-5520285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
71, 90
               

               
Conread position:
               
32-203
               

               
Cow position:
               
chr29:22335210-22335035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
69, 88
               

               
Conread position:
               
32-234
               

               
Cow position:
               
chr29:27929787-27929987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
81, 102
               

               
Conread position:
               
32-234
               

               
Cow position:
               
chr29:31107485-31107685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
188, 83
               

               
Conread position:
               
33-222
               

               
Cow position:
               
chr29:11894718-11894907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
89, 181
               

               
Conread position:
               
34-211
               

               
Cow position:
               
chr29:1614950-1615125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
66, 86
               

               
Conread position:
               
34-213
               

               
Cow position:
               
chr29:44141024-44141205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 105
               

               
Conread position:
               
34-214
               

               
Cow position:
               
chr29:17282089-17282262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
34-216
               

               
Cow position:
               
chr29:7444040-7443864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
66, 85
               

               
Conread position:
               
34-218
               

               
Cow position:
               
chr29:34274355-34274170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 13
               

               
Conread position:
               
34-228
               

               
Cow position:
               
chr29:936228-936415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
67, 95
               

               
Conread position:
               
34-228
               

               
Cow position:
               
chr29:35071063-35070857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 163
               

               
Conread position:
               
36-208
               

               
Cow position:
               
chr29:23819367-23819189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
36-211
               

               
Cow position:
               
chr29:16735247-16735424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
36-211
               

               
Cow position:
               
chr29:24026716-24026900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 64
               

               
Conread position:
               
36-215
               

               
Cow position:
               
chr29:24660710-24660879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
36-215
               

               
Cow position:
               
chr29:27911614-27911795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
86, 41
               

               
Conread position:
               
36-218
               

               
Cow position:
               
chr29:35189630-35189816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
36-222
               

               
Cow position:
               
chr29:20685192-20685379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
76, 105
               

               
Conread position:
               
36-222
               

               
Cow position:
               
chr29:29183745-29183933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 50
               

               
Conread position:
               
36-224
               

               
Cow position:
               
chr29:28813951-28813760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
36-228
               

               
Cow position:
               
chr29:25793169-25793353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
37-214
               

               
Cow position:
               
chr29:40583808-40583986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 125
               

               
Conread position:
               
39-228
               

               
Cow position:
               
chr29:42646076-42646264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
39-228
               

               
Cow position:
               
chr29:42797982-42798170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
40-197
               

               
Cow position:
               
chr29:28257168-28257327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
40-215
               

               
Cow position:
               
chr29:10203799-10203971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 96
               

               
Conread position:
               
40-215
               

               
Cow position:
               
chr29:26017475-26017297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
68, 80
               

               
Conread position:
               
40-225
               

               
Cow position:
               
chr29:685146-684963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 39
               

               
Conread position:
               
40-225
               

               
Cow position:
               
chr29:10192012-10191832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
40-225
               

               
Cow position:
               
chr29:11081369-11081182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
69, 86
               

               
Conread position:
               
40-228
               

               
Cow position:
               
chr29:4813368-4813559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
40-228
               

               
Cow position:
               
chr29:42630148-42630334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 58
               

               
Conread position:
               
41-177
               

               
Cow position:
               
chr29:27042300-27042440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
41-182
               

               
Cow position:
               
chr29:34688878-34688741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
41-204
               

               
Cow position:
               
chr29:934949-935117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 79
               

               
Conread position:
               
41-204
               

               
Cow position:
               
chr29:1946880-1946724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
60, 80
               

               
Conread position:
               
41-210
               

               
Cow position:
               
chr29:16561742-16561577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
134, 48
               

               
Conread position:
               
41-215
               

               
Cow position:
               
chr29:25432481-25432656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 97
               

               
Conread position:
               
41-221
               

               
Cow position:
               
chr29:25092134-25092314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 69
               

               
Conread position:
               
41-228
               

               
Cow position:
               
chr29:18748362-18748172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
43-225
               

               
Cow position:
               
chr29:6774871-6774695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
43-229
               

               
Cow position:
               
chr29:2219417-2219601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 78
               

               
Conread position:
               
44-188
               

               
Cow position:
               
chr29:25846528-25846379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
44-193
               

               
Cow position:
               
chr29:41223196-41223344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 42
               

               
Conread position:
               
44-211
               

               
Cow position:
               
chr29:2730260-2730083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 109
               

               
Conread position:
               
44-228
               

               
Cow position:
               
chr29:14761485-14761662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
47-207
               

               
Cow position:
               
chr29:41422877-41422715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 74
               

               
Conread position:
               
47-215
               

               
Cow position:
               
chr29:37990965-37990785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
47-216
               

               
Cow position:
               
chr29:5064809-5064967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 68
               

               
Conread position:
               
47-216
               

               
Cow position:
               
chr29:33143320-33143154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
54, 73
               

               
Conread position:
               
47-219
               

               
Cow position:
               
chr29:43311514-43311335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
47-222
               

               
Cow position:
               
chr29:396440-396610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
47-222
               

               
Cow position:
               
chr29:12025439-12025269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
47-222
               

               
Cow position:
               
chr29:38732187-38732364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
47-235
               

               
Cow position:
               
chr29:7414535-7414715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
18, 75
               

               
Conread position:
               
49-214
               

               
Cow position:
               
chr29:23678745-23678902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
50-211
               

               
Cow position:
               
chr29:7040835-7040670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 91
               

               
Conread position:
               
50-222
               

               
Cow position:
               
chr29:24604933-24605106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 70
               

               
Conread position:
               
50-228
               

               
Cow position:
               
chr29:22019150-22018970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
52, 89
               

               
Conread position:
               
52-236
               

               
Cow position:
               
chr29:25981963-25981780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 8
               

               
Conread position:
               
53-213
               

               
Cow position:
               
chr29:36357166-36357328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
53-221
               

               
Cow position:
               
chr29:18605620-18605459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
60, 67
               

               
Conread position:
               
58-211
               

               
Cow position:
               
chr29:40112427-40112577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
58-214
               

               
Cow position:
               
chr29:22776124-22776277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
44, 80
               

               
Conread position:
               
58-228
               

               
Cow position:
               
chr29:22720597-22720431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
153, 9
               

               
Conread position:
               
58-228
               

               
Cow position:
               
chr29:31942430-31942610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
54, 44
               

               
Conread position:
               
59-228
               

               
Cow position:
               
chr29:17718973-17718817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
31, 67
               

               
Conread position:
               
59-229
               

               
Cow position:
               
chr29:36546736-36546566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
63-228
               

               
Cow position:
               
chr29:6636130-6636297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 56
               

               
Conread position:
               
69-214
               

               
Cow position:
               
chr29:2071148-2070995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
73-215
               

               
Cow position:
               
chr29:11887328-11887463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 41
               

               
Conread position:
               
77-218
               

               
Cow position:
               
chr29:38010509-38010651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
79-207
               

               
Cow position:
               
chr29:570773-570650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
80-228
               

               
Cow position:
               
chr29:22705102-22705258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
86-211
               

               
Cow position:
               
chr29:659355-659479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
87-210
               

               
Cow position:
               
chr29:28726901-28727021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
95-222
               

               
Cow position:
               
chr29:34919377-34919253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
126-222
               

               
Cow position:
               
chr29:29176250-29176154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.