Cow genome map
| Conread name: | rmcp03c_e14.y1 | 
| Conread position: | 1-116 | 
| Cow position: | chr6:60350263-60350145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 1-122 | 
| Cow position: | chr6:51463604-51463481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 23, 86 | 
| Conread position: | 1-122 | 
| Cow position: | chr6:58597477-58597352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 1-123 | 
| Cow position: | chr6:28977011-28976886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 1-126 | 
| Cow position: | chr6:66375304-66375177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 1-127 | 
| Cow position: | chr6:43651781-43651909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 23, 120 | 
| Conread position: | 1-129 | 
| Cow position: | chr6:29248509-29248638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 97, 23 | 
| Conread position: | 1-133 | 
| Cow position: | chr6:21869620-21869486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 23, 121 | 
| Conread position: | 1-134 | 
| Cow position: | chr6:53090038-53090172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 28, 120 | 
| Conread position: | 1-140 | 
| Cow position: | chr6:54990972-54990832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 24, 120 | 
| Conread position: | 1-144 | 
| Cow position: | chr6:61569661-61569803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 23, 45 | 
| Conread position: | 1-145 | 
| Cow position: | chr6:1002234-1002089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 23, 136 | 
| Conread position: | 1-145 | 
| Cow position: | chr6:23466004-23465857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 23, 58 | 
| Conread position: | 1-149 | 
| Cow position: | chr6:54471902-54471749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 23, 49 | 
| Conread position: | 1-152 | 
| Cow position: | chr6:8209574-8209419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 23, 11 | 
| Conread position: | 1-152 | 
| Cow position: | chr6:46571135-46571287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 30, 11 | 
| Conread position: | 1-173 | 
| Cow position: | chr6:57571508-57571679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 23, 121 | 
| Conread position: | 1-182 | 
| Cow position: | chr6:61168784-61168975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 1-184 | 
| Cow position: | chr6:67643662-67643477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 21, 136 | 
| Conread position: | 1-195 | 
| Cow position: | chr6:1871169-1870974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 23, 129 | 
| Conread position: | 1-198 | 
| Cow position: | chr6:5114020-5113821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 23, 36 | 
| Conread position: | 1-198 | 
| Cow position: | chr6:68816197-68816396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 23, 9 | 
| Conread position: | 1-199 | 
| Cow position: | chr6:60516855-60517065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 23, 55 | 
| Conread position: | 1-205 | 
| Cow position: | chr6:12338022-12338223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 23, 86 | 
| Conread position: | 1-205 | 
| Cow position: | chr6:39358315-39358110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 21, 8 | 
| Conread position: | 1-206 | 
| Cow position: | chr6:12623544-12623743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 23, 70 | 
| Conread position: | 1-207 | 
| Cow position: | chr6:38853630-38853421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 25, 139 | 
| Conread position: | 1-208 | 
| Cow position: | chr6:49437362-49437567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 23, 121 | 
| Conread position: | 1-209 | 
| Cow position: | chr6:9302688-9302486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 23, 47 | 
| Conread position: | 1-209 | 
| Cow position: | chr6:46465850-46466055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 25, 120 | 
| Conread position: | 1-209 | 
| Cow position: | chr6:61109816-61110019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 21, 74 | 
| Conread position: | 1-209 | 
| Cow position: | chr6:67950984-67951194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 101, 22 | 
| Conread position: | 1-210 | 
| Cow position: | chr6:5609416-5609204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 100, 27 | 
| Conread position: | 1-210 | 
| Cow position: | chr6:58725399-58725605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 22, 58 | 
| Conread position: | 1-211 | 
| Cow position: | chr6:21475756-21475964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 22, 98 | 
| Conread position: | 1-211 | 
| Cow position: | chr6:38441204-38441419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 103, 22 | 
| Conread position: | 1-211 | 
| Cow position: | chr6:45690581-45690380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 23, 120 | 
| Conread position: | 1-211 | 
| Cow position: | chr6:46282975-46282753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 7e-30 | 
| Alignm gaps (pig, cow): | 23, 120 | 
| Conread position: | 1-211 | 
| Cow position: | chr6:47355852-47356065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 7e-30 | 
| Alignm gaps (pig, cow): | 23, 76 | 
| Conread position: | 1-211 | 
| Cow position: | chr6:57546192-57545990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 19, 28 | 
| Conread position: | 1-211 | 
| Cow position: | chr6:66259758-66259976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 10, 14 | 
| Conread position: | 1-212 | 
| Cow position: | chr6:6400983-6401205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 24, 47 | 
| Conread position: | 1-212 | 
| Cow position: | chr6:37395372-37395161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 22, 127 | 
| Conread position: | 1-212 | 
| Cow position: | chr6:56986619-56986408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 22, 39 | 
| Conread position: | 1-213 | 
| Cow position: | chr6:17068619-17068414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 23, 128 | 
| Conread position: | 1-214 | 
| Cow position: | chr6:19292830-19293040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 7e-30 | 
| Alignm gaps (pig, cow): | 23, 108 | 
| Conread position: | 1-214 | 
| Cow position: | chr6:53546064-53546271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 23, 127 | 
| Conread position: | 1-215 | 
| Cow position: | chr6:8966127-8966331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 24, 11 | 
| Conread position: | 1-215 | 
| Cow position: | chr6:15305600-15305815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 23, 47 | 
| Conread position: | 1-215 | 
| Cow position: | chr6:21535066-21535283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 22, 123 | 
| Conread position: | 1-215 | 
| Cow position: | chr6:26155177-26155388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 23, 121 | 
| Conread position: | 1-215 | 
| Cow position: | chr6:31535539-31535330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 23, 11 | 
| Conread position: | 1-215 | 
| Cow position: | chr6:36202850-36203064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 23, 47 | 
| Conread position: | 1-215 | 
| Cow position: | chr6:55282265-55282049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 23, 151 | 
| Conread position: | 1-216 | 
| Cow position: | chr6:4383509-4383717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 23, 13 | 
| Conread position: | 1-216 | 
| Cow position: | chr6:61524176-61523971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 23, 126 | 
| Conread position: | 1-218 | 
| Cow position: | chr6:120276-120483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 23, 36 | 
| Conread position: | 1-218 | 
| Cow position: | chr6:10105950-10105738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 23, 120 | 
| Conread position: | 1-218 | 
| Cow position: | chr6:17794735-17794509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 22, 120 | 
| Conread position: | 1-218 | 
| Cow position: | chr6:30023914-30024123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 23, 121 | 
| Conread position: | 1-218 | 
| Cow position: | chr6:44078547-44078761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 101, 20 | 
| Conread position: | 1-219 | 
| Cow position: | chr6:4691946-4691720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 22, 90 | 
| Conread position: | 1-220 | 
| Cow position: | chr6:11246795-11247015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 62, 22 | 
| Conread position: | 1-220 | 
| Cow position: | chr6:15243284-15243509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 23, 189 | 
| Conread position: | 1-221 | 
| Cow position: | chr6:13565117-13565332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 107, 22 | 
| Conread position: | 1-221 | 
| Cow position: | chr6:18447487-18447267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 22, 12 | 
| Conread position: | 1-221 | 
| Cow position: | chr6:29775651-29775866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 21, 76 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:6201453-6201687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:7128374-7128155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 23, 120 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:14914206-14913981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 101, 119 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:21004703-21004931 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 22, 104 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:21470400-21470182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 23, 121 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:32867189-32866971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 21, 14 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:38640262-38640484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 6e-39 | 
| Alignm gaps (pig, cow): | 23, 121 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:47574935-47575142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 23, 127 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:54365299-54365078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 22, 12 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:54846250-54846027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 22, 126 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:60144169-60143948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 126 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:63065855-63066087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 7e-40 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:67451342-67451122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 21, 121 | 
| Conread position: | 1-223 | 
| Cow position: | chr6:694122-693894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 23, 127 | 
| Conread position: | 1-225 | 
| Cow position: | chr6:50504485-50504709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 126 | 
| Conread position: | 1-226 | 
| Cow position: | chr6:50771330-50771110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 101, 22 | 
| Conread position: | 1-227 | 
| Cow position: | chr6:1941803-1941579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 22, 47 | 
| Conread position: | 1-227 | 
| Cow position: | chr6:24536503-24536269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 22, 142 | 
| Conread position: | 1-227 | 
| Cow position: | chr6:46558086-46558310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 22, 108 | 
| Conread position: | 1-227 | 
| Cow position: | chr6:58459750-58459970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 22, 120 | 
| Conread position: | 1-227 | 
| Cow position: | chr6:60850729-60850953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 8.00001e-42 | 
| Alignm gaps (pig, cow): | 22, 126 | 
| Conread position: | 1-227 | 
| Cow position: | chr6:62669894-62670125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 7e-30 | 
| Alignm gaps (pig, cow): | 22, 222 | 
| Conread position: | 1-228 | 
| Cow position: | chr6:1866761-1866987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 23, 11 | 
| Conread position: | 1-228 | 
| Cow position: | chr6:59603179-59602959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 23, 116 | 
| Conread position: | 1-229 | 
| Cow position: | chr6:6965368-6965138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 100, 77 | 
| Conread position: | 1-229 | 
| Cow position: | chr6:16103167-16102933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 23, 46 | 
| Conread position: | 1-229 | 
| Cow position: | chr6:21231553-21231769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 23, 103 | 
| Conread position: | 1-229 | 
| Cow position: | chr6:23696029-23696251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 23, 121 | 
| Conread position: | 1-229 | 
| Cow position: | chr6:25615066-25614834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 27, 135 | 
| Conread position: | 1-229 | 
| Cow position: | chr6:60468267-60468489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 23, 121 | 
| Conread position: | 1-230 | 
| Cow position: | chr6:2078786-2078558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 8.99634e-43 | 
| Alignm gaps (pig, cow): | 23, 126 | 
| Conread position: | 1-230 | 
| Cow position: | chr6:32121936-32122154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 23, 94 | 
| Conread position: | 1-230 | 
| Cow position: | chr6:47520082-47520311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 23, 137 | 
| Conread position: | 1-231 | 
| Cow position: | chr6:19264470-19264242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 23, 120 | 
| Conread position: | 1-231 | 
| Cow position: | chr6:51933583-51933798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 23, 47 | 
| Conread position: | 1-233 | 
| Cow position: | chr6:23353580-23353819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 86, 97 | 
| Conread position: | 1-236 | 
| Cow position: | chr6:17997290-17997055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 22, 36 | 
| Conread position: | 1-248 | 
| Cow position: | chr6:8688818-8688573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 22, 125 | 
| Conread position: | 1-248 | 
| Cow position: | chr6:13687783-13687541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 23, 81 | 
| Conread position: | 2-125 | 
| Cow position: | chr6:12551301-12551427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 22, 10 | 
| Conread position: | 2-127 | 
| Cow position: | chr6:19259311-19259183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 22, 12 | 
| Conread position: | 2-192 | 
| Cow position: | chr6:19695839-19696029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 21, 35 | 
| Conread position: | 2-194 | 
| Cow position: | chr6:63720230-63720414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 22, 134 | 
| Conread position: | 2-202 | 
| Cow position: | chr6:48379584-48379381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 21, 138 | 
| Conread position: | 2-214 | 
| Cow position: | chr6:54349724-54349938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 22, 49 | 
| Conread position: | 2-222 | 
| Cow position: | chr6:21293465-21293249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 22, 10 | 
| Conread position: | 2-227 | 
| Cow position: | chr6:53932819-53932585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 21, 57 | 
| Conread position: | 3-125 | 
| Cow position: | chr6:68685586-68685709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 98, 9 | 
| Conread position: | 3-133 | 
| Cow position: | chr6:18422958-18422827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 21, 10 | 
| Conread position: | 3-164 | 
| Cow position: | chr6:6067671-6067512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 20, 120 | 
| Conread position: | 3-207 | 
| Cow position: | chr6:36196242-36196437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 28, 9 | 
| Conread position: | 3-207 | 
| Cow position: | chr6:38207459-38207250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 21, 108 | 
| Conread position: | 3-211 | 
| Cow position: | chr6:46860135-46859932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 21, 10 | 
| Conread position: | 3-213 | 
| Cow position: | chr6:16090934-16091138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 21, 123 | 
| Conread position: | 3-215 | 
| Cow position: | chr6:143343-143135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 21, 25 | 
| Conread position: | 3-215 | 
| Cow position: | chr6:29485114-29485326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 48, 127 | 
| Conread position: | 3-216 | 
| Cow position: | chr6:20219744-20219533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 20, 11 | 
| Conread position: | 3-220 | 
| Cow position: | chr6:51581220-51581008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 7e-30 | 
| Alignm gaps (pig, cow): | 21, 10 | 
| Conread position: | 3-221 | 
| Cow position: | chr6:3351060-3351279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 21, 10 | 
| Conread position: | 3-221 | 
| Cow position: | chr6:58370789-58370999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 20, 53 | 
| Conread position: | 3-222 | 
| Cow position: | chr6:25435003-25434776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 24, 45 | 
| Conread position: | 3-225 | 
| Cow position: | chr6:22850223-22849997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 22, 12 | 
| Conread position: | 3-226 | 
| Cow position: | chr6:15300798-15300586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 20, 44 | 
| Conread position: | 3-228 | 
| Cow position: | chr6:10176271-10176038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 20, 119 | 
| Conread position: | 3-228 | 
| Cow position: | chr6:33509821-33510045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 20, 11 | 
| Conread position: | 3-228 | 
| Cow position: | chr6:64431968-64432190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 22, 124 | 
| Conread position: | 3-228 | 
| Cow position: | chr6:67069784-67069561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 21, 12 | 
| Conread position: | 3-229 | 
| Cow position: | chr6:43787880-43787651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 3-233 | 
| Cow position: | chr6:13040472-13040716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 21, 9 | 
| Conread position: | 3-259 | 
| Cow position: | chr6:2547287-2547546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 97, 128 | 
| Conread position: | 4-211 | 
| Cow position: | chr6:35171637-35171853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 20, 73 | 
| Conread position: | 4-220 | 
| Cow position: | chr6:38610001-38610222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 19, 10 | 
| Conread position: | 4-221 | 
| Cow position: | chr6:68376289-68376065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 18, 47 | 
| Conread position: | 4-222 | 
| Cow position: | chr6:9736624-9736396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 20, 44 | 
| Conread position: | 4-227 | 
| Cow position: | chr6:3952551-3952775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 19, 10 | 
| Conread position: | 4-228 | 
| Cow position: | chr6:24776171-24776395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 19, 7 | 
| Conread position: | 5-222 | 
| Cow position: | chr6:43607217-43606993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 83, 18 | 
| Conread position: | 5-228 | 
| Cow position: | chr6:3936817-3937045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 34 | 
| Conread position: | 6-207 | 
| Cow position: | chr6:22985821-22985627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 18, 102 | 
| Conread position: | 6-207 | 
| Cow position: | chr6:65903590-65903391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 17, 85 | 
| Conread position: | 6-214 | 
| Cow position: | chr6:12761313-12761522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 18, 71 | 
| Conread position: | 6-215 | 
| Cow position: | chr6:1475379-1475580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 11, 121 | 
| Conread position: | 6-215 | 
| Cow position: | chr6:5820213-5820017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 18, 81 | 
| Conread position: | 6-215 | 
| Cow position: | chr6:22876897-22876683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 17, 121 | 
| Conread position: | 6-215 | 
| Cow position: | chr6:53024770-53024568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 18, 121 | 
| Conread position: | 6-221 | 
| Cow position: | chr6:13653387-13653595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 18, 40 | 
| Conread position: | 6-222 | 
| Cow position: | chr6:6060538-6060325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 17, 130 | 
| Conread position: | 6-222 | 
| Cow position: | chr6:35181223-35181001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 6-222 | 
| Cow position: | chr6:42034806-42035021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 18, 54 | 
| Conread position: | 6-223 | 
| Cow position: | chr6:66839232-66839444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 96, 41 | 
| Conread position: | 6-225 | 
| Cow position: | chr6:44194515-44194303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 18, 90 | 
| Conread position: | 6-226 | 
| Cow position: | chr6:12669134-12669353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 97, 41 | 
| Conread position: | 6-228 | 
| Cow position: | chr6:47305375-47305597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 17, 71 | 
| Conread position: | 6-230 | 
| Cow position: | chr6:60118184-60118400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 17, 86 | 
| Conread position: | 7-201 | 
| Cow position: | chr6:60740049-60740239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 16, 124 | 
| Conread position: | 7-206 | 
| Cow position: | chr6:49398585-49398395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 17, 124 | 
| Conread position: | 7-210 | 
| Cow position: | chr6:57079458-57079664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 7-215 | 
| Cow position: | chr6:49421753-49421553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 94, 40 | 
| Conread position: | 7-215 | 
| Cow position: | chr6:66947783-66947575 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 16, 30 | 
| Conread position: | 7-218 | 
| Cow position: | chr6:62056649-62056857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 17, 115 | 
| Conread position: | 7-221 | 
| Cow position: | chr6:26728497-26728294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 18, 114 | 
| Conread position: | 7-222 | 
| Cow position: | chr6:5330447-5330664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 16, 96 | 
| Conread position: | 7-222 | 
| Cow position: | chr6:24468361-24468149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 120 | 
| Conread position: | 7-228 | 
| Cow position: | chr6:18955041-18954836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 17, 41 | 
| Conread position: | 7-228 | 
| Cow position: | chr6:60273976-60273756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 17, 115 | 
| Conread position: | 7-229 | 
| Cow position: | chr6:17414412-17414190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 16, 122 | 
| Conread position: | 8-207 | 
| Cow position: | chr6:24781519-24781316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 15, 29 | 
| Conread position: | 9-212 | 
| Cow position: | chr6:53460530-53460331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 15, 112 | 
| Conread position: | 10-222 | 
| Cow position: | chr6:17404599-17404813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 92, 71 | 
| Conread position: | 10-223 | 
| Cow position: | chr6:63168724-63168510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 92, 9 | 
| Conread position: | 10-229 | 
| Cow position: | chr6:55417490-55417278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 13, 93 | 
| Conread position: | 11-210 | 
| Cow position: | chr6:53711441-53711641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 12, 106 | 
| Conread position: | 12-191 | 
| Cow position: | chr6:36920934-36920756 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 13, 27 | 
| Conread position: | 12-215 | 
| Cow position: | chr6:15587557-15587347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 12-222 | 
| Cow position: | chr6:36537321-36537113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 6e-39 | 
| Alignm gaps (pig, cow): | 10, 116 | 
| Conread position: | 12-228 | 
| Cow position: | chr6:41657307-41657520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 12, 109 | 
| Conread position: | 14-134 | 
| Cow position: | chr6:28900368-28900490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 10, 108 | 
| Conread position: | 14-207 | 
| Cow position: | chr6:21350991-21350796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 10, 63 | 
| Conread position: | 14-211 | 
| Cow position: | chr6:41226788-41226608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 10, 37 | 
| Conread position: | 14-228 | 
| Cow position: | chr6:24514504-24514277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 15-210 | 
| Cow position: | chr6:54820875-54821072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 87, 111 | 
| Conread position: | 15-234 | 
| Cow position: | chr6:54889645-54889867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 110, 5 | 
| Conread position: | 16-222 | 
| Cow position: | chr6:22215426-22215213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 9, 21 | 
| Conread position: | 17-218 | 
| Cow position: | chr6:12928187-12928387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 15, 109 | 
| Conread position: | 18-228 | 
| Cow position: | chr6:15266307-15266107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 6, 55 | 
| Conread position: | 20-197 | 
| Cow position: | chr6:24905676-24905847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 82, 52 | 
| Conread position: | 21-181 | 
| Cow position: | chr6:30895941-30895781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 115, 7 | 
| Conread position: | 21-182 | 
| Cow position: | chr6:26915381-26915538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 80, 26 | 
| Conread position: | 21-207 | 
| Cow position: | chr6:61269362-61269552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 81, 99 | 
| Conread position: | 21-209 | 
| Cow position: | chr6:21083491-21083304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 80, 106 | 
| Conread position: | 21-210 | 
| Cow position: | chr6:25773166-25772981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 79, 26 | 
| Conread position: | 21-214 | 
| Cow position: | chr6:65871087-65871273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 80, 51 | 
| Conread position: | 21-215 | 
| Cow position: | chr6:5601752-5601943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 81, 26 | 
| Conread position: | 21-215 | 
| Cow position: | chr6:37332158-37332354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 46, 80 | 
| Conread position: | 21-218 | 
| Cow position: | chr6:66978919-66979117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 81, 26 | 
| Conread position: | 21-218 | 
| Cow position: | chr6:67451597-67451418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 21-222 | 
| Cow position: | chr6:35985084-35984884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 87, 7 | 
| Conread position: | 21-228 | 
| Cow position: | chr6:53792419-53792223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 80, 111 | 
| Conread position: | 21-234 | 
| Cow position: | chr6:52478361-52478145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 80, 108 | 
| Conread position: | 21-235 | 
| Cow position: | chr6:42483468-42483680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 115, 7 | 
| Conread position: | 21-249 | 
| Cow position: | chr6:60186613-60186373 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 80, 100 | 
| Conread position: | 22-145 | 
| Cow position: | chr6:47676065-47676188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 79, 19 | 
| Conread position: | 22-173 | 
| Cow position: | chr6:59301737-59301582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 22-188 | 
| Cow position: | chr6:35842709-35842876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 85, 98 | 
| Conread position: | 22-198 | 
| Cow position: | chr6:2584993-2585167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 78, 99 | 
| Conread position: | 22-199 | 
| Cow position: | chr6:61644808-61644629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 12, 17 | 
| Conread position: | 22-211 | 
| Cow position: | chr6:26054854-26054661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 83, 78 | 
| Conread position: | 22-215 | 
| Cow position: | chr6:55548483-55548289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 95, 115 | 
| Conread position: | 22-215 | 
| Cow position: | chr6:62078973-62079163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 85, 99 | 
| Conread position: | 22-219 | 
| Cow position: | chr6:32126107-32126298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 99, 54 | 
| Conread position: | 22-219 | 
| Cow position: | chr6:55297044-55296844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 83, 78 | 
| Conread position: | 22-221 | 
| Cow position: | chr6:6063243-6063042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 105, 118 | 
| Conread position: | 22-222 | 
| Cow position: | chr6:8600051-8600254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 81, 24 | 
| Conread position: | 22-222 | 
| Cow position: | chr6:36225159-36225362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 7e-30 | 
| Alignm gaps (pig, cow): | 114, 0 | 
| Conread position: | 22-222 | 
| Cow position: | chr6:67574439-67574640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 86, 41 | 
| Conread position: | 22-225 | 
| Cow position: | chr6:15242887-15243092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 80, 104 | 
| Conread position: | 22-225 | 
| Cow position: | chr6:41014928-41014723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 80, 191 | 
| Conread position: | 22-226 | 
| Cow position: | chr6:34475510-34475304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 22-227 | 
| Cow position: | chr6:23401941-23401740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 80, 33 | 
| Conread position: | 22-227 | 
| Cow position: | chr6:35726145-35726345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 80, 111 | 
| Conread position: | 22-228 | 
| Cow position: | chr6:8187139-8186929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 78, 98 | 
| Conread position: | 22-228 | 
| Cow position: | chr6:32453436-32453645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 80, 64 | 
| Conread position: | 22-230 | 
| Cow position: | chr6:47245831-47246040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 78, 36 | 
| Conread position: | 22-233 | 
| Cow position: | chr6:13742039-13742248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 116, 54 | 
| Conread position: | 22-234 | 
| Cow position: | chr6:15058427-15058639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 80, 104 | 
| Conread position: | 22-236 | 
| Cow position: | chr6:19563433-19563215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 83, 78 | 
| Conread position: | 23-198 | 
| Cow position: | chr6:40682611-40682442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 79, 24 | 
| Conread position: | 23-212 | 
| Cow position: | chr6:24339334-24339529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 23-215 | 
| Cow position: | chr6:5095490-5095297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 95, 162 | 
| Conread position: | 23-216 | 
| Cow position: | chr6:50883623-50883435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 79, 5 | 
| Conread position: | 23-222 | 
| Cow position: | chr6:67187735-67187931 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 10, 104 | 
| Conread position: | 23-232 | 
| Cow position: | chr6:15172617-15172818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 33, 106 | 
| Conread position: | 24-202 | 
| Cow position: | chr6:39093804-39093975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 24-215 | 
| Cow position: | chr6:6195050-6194859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 78, 58 | 
| Conread position: | 24-222 | 
| Cow position: | chr6:19996667-19996866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 78, 69 | 
| Conread position: | 24-222 | 
| Cow position: | chr6:38550566-38550376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 112, 22 | 
| Conread position: | 24-227 | 
| Cow position: | chr6:47150872-47151075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 189, 106 | 
| Conread position: | 24-228 | 
| Cow position: | chr6:40050128-40050331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 100, 114 | 
| Conread position: | 24-243 | 
| Cow position: | chr6:48097548-48097332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 52, 99 | 
| Conread position: | 25-222 | 
| Cow position: | chr6:53145629-53145429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 26-226 | 
| Cow position: | chr6:21052395-21052191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 27-211 | 
| Cow position: | chr6:49685874-49686059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 93, 20 | 
| Conread position: | 27-218 | 
| Cow position: | chr6:42567548-42567744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 48, 0 | 
| Conread position: | 27-226 | 
| Cow position: | chr6:26408449-26408248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 75, 99 | 
| Conread position: | 27-232 | 
| Cow position: | chr6:28562113-28561906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 86, 78 | 
| Conread position: | 28-178 | 
| Cow position: | chr6:31078811-31078662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 108, 87 | 
| Conread position: | 28-193 | 
| Cow position: | chr6:28483072-28483238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 31, 93 | 
| Conread position: | 28-213 | 
| Cow position: | chr6:15937798-15937609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 28-215 | 
| Cow position: | chr6:14263834-14263644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 32, 56 | 
| Conread position: | 28-215 | 
| Cow position: | chr6:32006398-32006213 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 74, 98 | 
| Conread position: | 28-215 | 
| Cow position: | chr6:36643435-36643244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 74, 24 | 
| Conread position: | 28-216 | 
| Cow position: | chr6:13367342-13367528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 74, 93 | 
| Conread position: | 28-221 | 
| Cow position: | chr6:36938924-36939123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 28-222 | 
| Cow position: | chr6:323248-323052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 104, 0 | 
| Conread position: | 28-222 | 
| Cow position: | chr6:18608755-18608561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 83, 109 | 
| Conread position: | 28-222 | 
| Cow position: | chr6:33960593-33960397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 101, 75 | 
| Conread position: | 28-222 | 
| Cow position: | chr6:57299815-57300020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 28-222 | 
| Cow position: | chr6:58697575-58697377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 79, 110 | 
| Conread position: | 28-222 | 
| Cow position: | chr6:59297109-59297295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 28-226 | 
| Cow position: | chr6:58304471-58304666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 108, 146 | 
| Conread position: | 28-227 | 
| Cow position: | chr6:611607-611796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 74, 19 | 
| Conread position: | 28-228 | 
| Cow position: | chr6:12964909-12965107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 74, 114 | 
| Conread position: | 28-228 | 
| Cow position: | chr6:17313792-17313991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 74, 53 | 
| Conread position: | 28-228 | 
| Cow position: | chr6:18440421-18440218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 79, 110 | 
| Conread position: | 28-228 | 
| Cow position: | chr6:51530131-51529935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 70, 93 | 
| Conread position: | 28-228 | 
| Cow position: | chr6:68594042-68594246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 77, 70 | 
| Conread position: | 28-230 | 
| Cow position: | chr6:19045679-19045886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 28-230 | 
| Cow position: | chr6:36809144-36808946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 84, 22 | 
| Conread position: | 28-235 | 
| Cow position: | chr6:55044585-55044375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 82, 92 | 
| Conread position: | 29-211 | 
| Cow position: | chr6:33302452-33302635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 73, 109 | 
| Conread position: | 29-215 | 
| Cow position: | chr6:43345384-43345195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 80, 99 | 
| Conread position: | 29-218 | 
| Cow position: | chr6:10039781-10039971 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 78, 92 | 
| Conread position: | 29-218 | 
| Cow position: | chr6:57467654-57467844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 73, 97 | 
| Conread position: | 29-222 | 
| Cow position: | chr6:4468826-4469019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 7e-30 | 
| Alignm gaps (pig, cow): | 104, 72 | 
| Conread position: | 29-226 | 
| Cow position: | chr6:411158-410964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 72, 52 | 
| Conread position: | 29-233 | 
| Cow position: | chr6:1173899-1173688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 73, 192 | 
| Conread position: | 29-244 | 
| Cow position: | chr6:28088990-28088774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 79, 96 | 
| Conread position: | 30-225 | 
| Cow position: | chr6:34569466-34569667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 72, 195 | 
| Conread position: | 30-237 | 
| Cow position: | chr6:21184164-21183957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 72, 51 | 
| Conread position: | 31-211 | 
| Cow position: | chr6:1103679-1103506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 71, 59 | 
| Conread position: | 31-215 | 
| Cow position: | chr6:32287699-32287874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 67, 41 | 
| Conread position: | 32-216 | 
| Cow position: | chr6:35743037-35743224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 11, 128 | 
| Conread position: | 32-223 | 
| Cow position: | chr6:39414883-39415075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 32, 107 | 
| Conread position: | 33-225 | 
| Cow position: | chr6:5600799-5600612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 68, 88 | 
| Conread position: | 34-145 | 
| Cow position: | chr6:1684740-1684853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 114 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 61, 0 | 
| Conread position: | 34-176 | 
| Cow position: | chr6:47344661-47344810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 34-211 | 
| Cow position: | chr6:58173412-58173581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 68, 82 | 
| Conread position: | 34-222 | 
| Cow position: | chr6:14383738-14383928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 68, 56 | 
| Conread position: | 34-230 | 
| Cow position: | chr6:34423396-34423204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 6e-39 | 
| Alignm gaps (pig, cow): | 67, 92 | 
| Conread position: | 34-233 | 
| Cow position: | chr6:7130817-7130599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 67, 0 | 
| Conread position: | 35-218 | 
| Cow position: | chr6:35342118-35341941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 11, 65 | 
| Conread position: | 36-199 | 
| Cow position: | chr6:47022625-47022786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 75, 94 | 
| Conread position: | 36-208 | 
| Cow position: | chr6:57089268-57089440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 66, 101 | 
| Conread position: | 36-215 | 
| Cow position: | chr6:53811647-53811829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 63, 85 | 
| Conread position: | 36-220 | 
| Cow position: | chr6:33150227-33150046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 77, 65 | 
| Conread position: | 36-221 | 
| Cow position: | chr6:37994273-37994453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 23, 81 | 
| Conread position: | 36-222 | 
| Cow position: | chr6:55404976-55405165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 36-222 | 
| Cow position: | chr6:63020407-63020593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 88, 61 | 
| Conread position: | 36-227 | 
| Cow position: | chr6:50577585-50577771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 65, 93 | 
| Conread position: | 37-211 | 
| Cow position: | chr6:19936504-19936329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 76, 82 | 
| Conread position: | 37-211 | 
| Cow position: | chr6:62724621-62724797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 75, 89 | 
| Conread position: | 37-215 | 
| Cow position: | chr6:34463522-34463347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 65, 89 | 
| Conread position: | 37-218 | 
| Cow position: | chr6:31847175-31846997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 65, 83 | 
| Conread position: | 37-221 | 
| Cow position: | chr6:62437480-62437666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 70, 104 | 
| Conread position: | 37-228 | 
| Cow position: | chr6:6850387-6850571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 30, 103 | 
| Conread position: | 38-207 | 
| Cow position: | chr6:154536-154707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 64, 143 | 
| Conread position: | 39-215 | 
| Cow position: | chr6:43540182-43540019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 40-222 | 
| Cow position: | chr6:43906615-43906427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 69, 89 | 
| Conread position: | 40-229 | 
| Cow position: | chr6:23025032-23024840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 41-200 | 
| Cow position: | chr6:27219236-27219394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 11, 86 | 
| Conread position: | 41-203 | 
| Cow position: | chr6:63182358-63182516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 63, 78 | 
| Conread position: | 41-207 | 
| Cow position: | chr6:32268818-32268652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 61, 89 | 
| Conread position: | 41-216 | 
| Cow position: | chr6:36570529-36570710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 60, 80 | 
| Conread position: | 41-216 | 
| Cow position: | chr6:56850089-56850261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 61, 78 | 
| Conread position: | 41-222 | 
| Cow position: | chr6:11853966-11853772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 41-222 | 
| Cow position: | chr6:48435900-48436083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 61, 79 | 
| Conread position: | 41-227 | 
| Cow position: | chr6:10225586-10225396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 61, 75 | 
| Conread position: | 41-228 | 
| Cow position: | chr6:16411680-16411872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 41-229 | 
| Cow position: | chr6:6547438-6547255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 61, 86 | 
| Conread position: | 42-215 | 
| Cow position: | chr6:4323400-4323566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 171, 72 | 
| Conread position: | 42-228 | 
| Cow position: | chr6:62224492-62224679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 60, 118 | 
| Conread position: | 43-214 | 
| Cow position: | chr6:48278817-48278653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 59, 78 | 
| Conread position: | 43-227 | 
| Cow position: | chr6:53732053-53732241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 43-230 | 
| Cow position: | chr6:54406727-54406549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 58, 9 | 
| Conread position: | 44-222 | 
| Cow position: | chr6:4699780-4699955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 58, 89 | 
| Conread position: | 45-222 | 
| Cow position: | chr6:16502972-16502788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 80, 130 | 
| Conread position: | 47-203 | 
| Cow position: | chr6:2014204-2014357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 54, 34 | 
| Conread position: | 47-205 | 
| Cow position: | chr6:8726753-8726910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 54, 93 | 
| Conread position: | 47-205 | 
| Cow position: | chr6:19446325-19446486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 18, 80 | 
| Conread position: | 47-209 | 
| Cow position: | chr6:38032933-38033095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 54, 80 | 
| Conread position: | 47-218 | 
| Cow position: | chr6:55646875-55646703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 40, 84 | 
| Conread position: | 47-220 | 
| Cow position: | chr6:5445743-5445916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 55, 13 | 
| Conread position: | 47-226 | 
| Cow position: | chr6:49645884-49646077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 47-230 | 
| Cow position: | chr6:16137695-16137508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 55, 93 | 
| Conread position: | 47-230 | 
| Cow position: | chr6:21061810-21061633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 55, 73 | 
| Conread position: | 48-199 | 
| Cow position: | chr6:2757861-2758009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 53, 72 | 
| Conread position: | 49-222 | 
| Cow position: | chr6:28559615-28559788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 56, 92 | 
| Conread position: | 49-226 | 
| Cow position: | chr6:7291393-7291564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 53, 67 | 
| Conread position: | 49-229 | 
| Cow position: | chr6:54840430-54840241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 50-225 | 
| Cow position: | chr6:16627813-16627983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 163, 74 | 
| Conread position: | 51-226 | 
| Cow position: | chr6:8369501-8369677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 53, 69 | 
| Conread position: | 54-222 | 
| Cow position: | chr6:21347068-21346903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 48, 84 | 
| Conread position: | 55-215 | 
| Cow position: | chr6:66058625-66058466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 7, 72 | 
| Conread position: | 55-222 | 
| Cow position: | chr6:62805726-62805896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 57, 84 | 
| Conread position: | 57-189 | 
| Cow position: | chr6:53235567-53235436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 44, 72 | 
| Conread position: | 58-220 | 
| Cow position: | chr6:59687726-59687561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 54, 82 | 
| Conread position: | 58-228 | 
| Cow position: | chr6:31928723-31928897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 51, 68 | 
| Conread position: | 59-212 | 
| Cow position: | chr6:26764740-26764582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 46, 38 | 
| Conread position: | 59-215 | 
| Cow position: | chr6:19025356-19025509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 44, 57 | 
| Conread position: | 60-227 | 
| Cow position: | chr6:54828234-54828064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 42, 66 | 
| Conread position: | 61-216 | 
| Cow position: | chr6:63233605-63233762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 76, 41 | 
| Conread position: | 63-221 | 
| Cow position: | chr6:50445026-50444866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 63-222 | 
| Cow position: | chr6:47673056-47672903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 38, 58 | 
| Conread position: | 63-228 | 
| Cow position: | chr6:16016125-16016294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 50, 75 | 
| Conread position: | 65-221 | 
| Cow position: | chr6:57320504-57320349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 37, 70 | 
| Conread position: | 66-211 | 
| Cow position: | chr6:23381574-23381427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 43, 60 | 
| Conread position: | 67-213 | 
| Cow position: | chr6:61884079-61883932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 68-222 | 
| Cow position: | chr6:43770802-43770651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 34, 62 | 
| Conread position: | 70-217 | 
| Cow position: | chr6:30688413-30688265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 33, 56 | 
| Conread position: | 71-228 | 
| Cow position: | chr6:62849025-62849178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 31, 43 | 
| Conread position: | 74-235 | 
| Cow position: | chr6:31713569-31713740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 76-215 | 
| Cow position: | chr6:59759275-59759413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 26, 44 | 
| Conread position: | 77-222 | 
| Cow position: | chr6:45633886-45633745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 24, 18 | 
| Conread position: | 82-222 | 
| Cow position: | chr6:67810874-67810736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 25, 49 | 
| Conread position: | 88-207 | 
| Cow position: | chr6:60673951-60674066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 14, 39 | 
| Conread position: | 97-221 | 
| Cow position: | chr6:9452608-9452478 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 16, 22 | 
Show alignments to all cow chromosomes.
