Cow genome map

Conread name: rmcp14c_f17.y1

Conread position: 334-571
Cow position: chr12:42918408-42918634 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 34

Conread position: 344-567
Cow position: chr12:17250462-17250690 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 9, 24

Conread position: 346-476
Cow position: chr12:22341195-22341327 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 15

Conread position: 347-540
Cow position: chr12:5635503-5635294 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 347-548
Cow position: chr12:5680634-5680831 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 28, 120

Conread position: 351-546
Cow position: chr12:27055564-27055748 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 28

Conread position: 353-544
Cow position: chr12:24273399-24273210 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 19

Conread position: 355-458
Cow position: chr12:44028467-44028573 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 355-543
Cow position: chr12:26217863-26217666 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 119, 20

Conread position: 356-477
Cow position: chr12:28213472-28213591 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 356-477
Cow position: chr12:30919387-30919507 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 19

Conread position: 356-538
Cow position: chr12:12331546-12331372 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 356-539
Cow position: chr12:37728105-37728286 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 15, 37

Conread position: 356-539
Cow position: chr12:37732819-37732639 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 15, 37

Conread position: 356-547
Cow position: chr12:48578805-48579000 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 106, 19

Conread position: 356-565
Cow position: chr12:20654519-20654298 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 38, 0

Conread position: 358-556
Cow position: chr12:1333193-1333393 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 17, 99

Conread position: 359-472
Cow position: chr12:28598229-28598340 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 359-556
Cow position: chr12:27037485-27037286 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 135, 16

Conread position: 359-559
Cow position: chr12:5714595-5714795 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 110, 17

Conread position: 359-560
Cow position: chr12:30805818-30806032 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 38, 16

Conread position: 361-571
Cow position: chr12:5658777-5658575 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 25

Conread position: 363-548
Cow position: chr12:24181115-24181309 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 363-569
Cow position: chr12:24391289-24391488 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 151, 21

Conread position: 364-475
Cow position: chr12:15790029-15790138 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 364-547
Cow position: chr12:4801335-4801518 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 152
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 364-555
Cow position: chr12:21903753-21903953 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 21

Conread position: 366-557
Cow position: chr12:17108130-17108329 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 108, 40

Conread position: 366-561
Cow position: chr12:7902829-7902626 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 366-575
Cow position: chr12:18103642-18103423 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 9, 0

Conread position: 366-579
Cow position: chr12:23446690-23446916 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 9, 143

Conread position: 367-569
Cow position: chr12:15509790-15509585 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 123, 84

Conread position: 368-543
Cow position: chr12:40309293-40309473 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 25

Conread position: 368-554
Cow position: chr12:34161385-34161575 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 155

Conread position: 369-516
Cow position: chr12:6123966-6124104 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 13, 24

Conread position: 369-531
Cow position: chr12:18130492-18130660 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 138
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 105, 7

Conread position: 370-484
Cow position: chr12:22469487-22469601 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 370-548
Cow position: chr12:40158049-40157862 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 47

Conread position: 370-572
Cow position: chr12:30590743-30590958 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 102, 9

Conread position: 371-477
Cow position: chr12:29200418-29200312 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 372-529
Cow position: chr12:3615974-3616130 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 137
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 94, 0

Conread position: 373-513
Cow position: chr12:11068395-11068545 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 78

Conread position: 373-555
Cow position: chr12:19697372-19697566 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 154

Conread position: 374-474
Cow position: chr12:42143139-42143238 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 374-475
Cow position: chr12:29969558-29969659 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 374-476
Cow position: chr12:6410756-6410653 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 374-476
Cow position: chr12:18765994-18765892 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 374-476
Cow position: chr12:27572261-27572159 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 83
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 374-477
Cow position: chr12:23913032-23912929 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 374-484
Cow position: chr12:8943245-8943135 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 374-492
Cow position: chr12:7110176-7110292 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 374-504
Cow position: chr12:20355194-20355324 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 374-513
Cow position: chr12:36994137-36993998 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 374-521
Cow position: chr12:4866796-4866953 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 374-527
Cow position: chr12:22515753-22515593 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 374-527
Cow position: chr12:41221030-41220868 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 103, 75

Conread position: 374-529
Cow position: chr12:27365907-27366054 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 374-529
Cow position: chr12:30194680-30194840 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 90, 148

Conread position: 374-529
Cow position: chr12:31517192-31517036 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 129
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 92, 0

Conread position: 374-533
Cow position: chr12:44542245-44542414 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 374-537
Cow position: chr12:24116384-24116218 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 67, 75

Conread position: 374-542
Cow position: chr12:18577818-18577987 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 374-543
Cow position: chr12:4954806-4954982 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 98, 61

Conread position: 374-543
Cow position: chr12:24166965-24166789 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 97, 169

Conread position: 374-543
Cow position: chr12:45092425-45092601 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 374-544
Cow position: chr12:17881840-17882017 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 0

Conread position: 374-545
Cow position: chr12:11056854-11057029 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 147

Conread position: 374-545
Cow position: chr12:24397184-24397002 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 92, 42

Conread position: 374-546
Cow position: chr12:4768905-4769083 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 147
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 97, 27

Conread position: 374-546
Cow position: chr12:6469081-6468910 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 160, 0

Conread position: 374-547
Cow position: chr12:6666553-6666726 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 145
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 100, 18

Conread position: 374-547
Cow position: chr12:22859446-22859615 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 92, 18

Conread position: 374-547
Cow position: chr12:25805153-25804980 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 90, 129

Conread position: 374-548
Cow position: chr12:31429592-31429426 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 104, 0

Conread position: 374-548
Cow position: chr12:37008724-37008544 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 147
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 104, 19

Conread position: 374-549
Cow position: chr12:30210462-30210637 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 143
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 374-550
Cow position: chr12:11587753-11587937 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 101, 149

Conread position: 374-552
Cow position: chr12:23939202-23939390 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 374-553
Cow position: chr12:3586097-3586285 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 118, 156

Conread position: 374-553
Cow position: chr12:34466025-34465847 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 150
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 374-554
Cow position: chr12:17273544-17273743 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 374-555
Cow position: chr12:4162384-4162200 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 116

Conread position: 374-555
Cow position: chr12:48415537-48415346 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 140

Conread position: 374-557
Cow position: chr12:9914768-9914956 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 103, 0

Conread position: 374-560
Cow position: chr12:37514302-37514103 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 374-562
Cow position: chr12:40881931-40881743 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 102, 40

Conread position: 374-563
Cow position: chr12:5554355-5554154 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 374-570
Cow position: chr12:6754175-6754382 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 101, 0

Conread position: 374-570
Cow position: chr12:42181150-42180940 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 92, 0

Conread position: 374-575
Cow position: chr12:13911602-13911382 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 374-576
Cow position: chr12:1889599-1889385 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 92, 137

Conread position: 374-581
Cow position: chr12:31198746-31198946 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 161, 92

Conread position: 374-583
Cow position: chr12:38774264-38774041 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 99, 0

Conread position: 374-584
Cow position: chr12:21922429-21922643 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 375-471
Cow position: chr12:27430486-27430582 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 375-475
Cow position: chr12:16147468-16147569 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 375-541
Cow position: chr12:26575876-26576051 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 375-547
Cow position: chr12:19715056-19714896 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 375-550
Cow position: chr12:1030960-1031132 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 375-553
Cow position: chr12:30413967-30413787 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 375-567
Cow position: chr12:35663943-35664144 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 375-575
Cow position: chr12:6958199-6958412 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 86, 0

Conread position: 376-468
Cow position: chr12:12300900-12300992 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 377-543
Cow position: chr12:24681801-24681961 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 377-555
Cow position: chr12:40931630-40931461 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 378-477
Cow position: chr12:44517755-44517656 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 378-477
Cow position: chr12:45014662-45014765 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 378-492
Cow position: chr12:39663217-39663100 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 378-530
Cow position: chr12:29779931-29779779 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 101, 148

Conread position: 378-537
Cow position: chr12:16543598-16543442 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 101

Conread position: 378-543
Cow position: chr12:17879318-17879144 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 42

Conread position: 378-544
Cow position: chr12:24023819-24023649 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 100, 0

Conread position: 378-545
Cow position: chr12:6687876-6688048 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 75, 0

Conread position: 378-546
Cow position: chr12:41159573-41159745 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 116, 18

Conread position: 378-546
Cow position: chr12:42477993-42478155 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 378-550
Cow position: chr12:9229517-9229348 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 150
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 378-550
Cow position: chr12:24559341-24559508 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 378-555
Cow position: chr12:42285953-42286137 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 378-555
Cow position: chr12:42951705-42951518 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 378-556
Cow position: chr12:11081116-11080944 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 378-561
Cow position: chr12:25561353-25561544 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 97, 26

Conread position: 378-563
Cow position: chr12:17702046-17701854 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 65, 0

Conread position: 378-563
Cow position: chr12:39781356-39781178 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 378-565
Cow position: chr12:27803067-27802876 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 88, 162

Conread position: 378-565
Cow position: chr12:45126863-45126675 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 162, 77

Conread position: 378-566
Cow position: chr12:45782209-45782408 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 378-573
Cow position: chr12:10763240-10763437 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 88, 0

Conread position: 378-580
Cow position: chr12:43854877-43855088 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 101, 13

Conread position: 379-546
Cow position: chr12:25606689-25606852 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 31, 95

Conread position: 379-548
Cow position: chr12:14986733-14986913 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 97, 81

Conread position: 379-550
Cow position: chr12:30042709-30042897 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 379-554
Cow position: chr12:24639619-24639800 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 95, 38

Conread position: 379-555
Cow position: chr12:35469463-35469277 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 93, 71

Conread position: 379-563
Cow position: chr12:4719931-4720126 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 379-571
Cow position: chr12:17929089-17928891 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 380-538
Cow position: chr12:1701820-1701658 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 92, 0

Conread position: 380-540
Cow position: chr12:3623679-3623849 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 380-544
Cow position: chr12:38804605-38804440 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 136
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 86, 0

Conread position: 380-572
Cow position: chr12:47804142-47804325 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 381-548
Cow position: chr12:35771035-35770858 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 141

Conread position: 381-568
Cow position: chr12:24595970-24596153 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 159, 94

Conread position: 381-572
Cow position: chr12:11836220-11836421 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 91, 129

Conread position: 382-533
Cow position: chr12:4122582-4122435 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 385-544
Cow position: chr12:11789770-11789616 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 385-550
Cow position: chr12:8859165-8859340 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 23, 125

Conread position: 385-555
Cow position: chr12:30170660-30170825 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 113, 7

Conread position: 386-539
Cow position: chr12:33948895-33949057 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 86, 139

Conread position: 386-543
Cow position: chr12:29731305-29731472 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 386-543
Cow position: chr12:39465570-39465726 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 80, 0

Conread position: 386-546
Cow position: chr12:17031606-17031773 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 77, 34

Conread position: 386-569
Cow position: chr12:18123660-18123853 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 386-575
Cow position: chr12:19007941-19007745 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 67

Conread position: 387-545
Cow position: chr12:33873387-33873238 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 387-546
Cow position: chr12:11520165-11520318 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 387-549
Cow position: chr12:41084048-41084212 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 130

Conread position: 387-561
Cow position: chr12:23916834-23917019 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 387-562
Cow position: chr12:3816473-3816649 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 42, 91

Conread position: 387-580
Cow position: chr12:11272834-11272632 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 158

Conread position: 389-543
Cow position: chr12:43644173-43644015 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 101, 75

Conread position: 389-543
Cow position: chr12:43645504-43645346 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 101, 75

Conread position: 389-573
Cow position: chr12:26945841-26945655 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 111, 154

Conread position: 390-551
Cow position: chr12:15066815-15066973 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 35

Conread position: 391-564
Cow position: chr12:41684503-41684686 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 393-540
Cow position: chr12:6465515-6465366 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 66, 57

Conread position: 393-552
Cow position: chr12:20776926-20776760 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 72, 34

Conread position: 393-555
Cow position: chr12:44908013-44908169 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 394-547
Cow position: chr12:44822292-44822447 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 80, 23

Conread position: 394-549
Cow position: chr12:7996410-7996559 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 395-583
Cow position: chr12:38032140-38031941 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 402-550
Cow position: chr12:1952795-1952637 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 403-545
Cow position: chr12:43869191-43869055 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 406-551
Cow position: chr12:45023765-45023612 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 132

Conread position: 408-548
Cow position: chr12:44892220-44892375 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 62, 39

Conread position: 415-579
Cow position: chr12:27332135-27331974 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 98

Conread position: 420-549
Cow position: chr12:29321246-29321117 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 429-557
Cow position: chr12:35799265-35799389 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 89, 44

Conread position: 429-558
Cow position: chr12:8275210-8275333 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 429-583
Cow position: chr12:29131631-29131790 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 31, 11

Conread position: 431-555
Cow position: chr12:7557814-7557694 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 431-582
Cow position: chr12:38592757-38592903 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 455-580
Cow position: chr12:38587212-38587088 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 473-570
Cow position: chr12:3872016-3872114 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 82
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 473-583
Cow position: chr12:44877836-44877946 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.