Cow genome map

Conread name: rmcp14c_f17.y1

Conread position: 334-477
Cow position: chrX:16481566-16481423 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 53

Conread position: 346-532
Cow position: chrX:35759921-35759739 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 121

Conread position: 348-555
Cow position: chrX:6676844-6677044 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 27, 20

Conread position: 349-544
Cow position: chrX:8780062-8780252 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 74

Conread position: 350-555
Cow position: chrX:25232017-25232222 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 36, 18

Conread position: 352-561
Cow position: chrX:41083936-41084140 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 23, 123

Conread position: 353-581
Cow position: chrX:28835743-28835513 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 123

Conread position: 354-542
Cow position: chrX:4942238-4942053 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 114

Conread position: 354-553
Cow position: chrX:24054700-24054899 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 159
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 21, 113

Conread position: 356-493
Cow position: chrX:18637516-18637658 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 356-540
Cow position: chrX:31260592-31260400 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 9, 23

Conread position: 356-540
Cow position: chrX:48428541-48428718 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 16

Conread position: 356-549
Cow position: chrX:40567645-40567839 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 18, 112

Conread position: 356-566
Cow position: chrX:4269038-4268820 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 25

Conread position: 356-568
Cow position: chrX:32747755-32747973 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 167

Conread position: 356-580
Cow position: chrX:15305272-15305051 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 47, 12

Conread position: 356-584
Cow position: chrX:27276722-27276945 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 358-477
Cow position: chrX:7107531-7107650 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 26

Conread position: 358-544
Cow position: chrX:1101585-1101780 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 358-549
Cow position: chrX:488706-488889 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 66

Conread position: 359-527
Cow position: chrX:46070143-46069973 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 118

Conread position: 359-546
Cow position: chrX:6041179-6041002 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 179, 9

Conread position: 361-553
Cow position: chrX:27415548-27415350 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 109, 14

Conread position: 362-569
Cow position: chrX:12972717-12972930 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 23

Conread position: 363-477
Cow position: chrX:32796074-32795961 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 110, 21

Conread position: 363-555
Cow position: chrX:45412206-45412003 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 363-559
Cow position: chrX:2523651-2523456 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 105

Conread position: 363-561
Cow position: chrX:31744969-31744769 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 112, 15

Conread position: 364-484
Cow position: chrX:35019288-35019406 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 364-546
Cow position: chrX:40116514-40116699 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 149
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 18, 39

Conread position: 364-548
Cow position: chrX:27170774-27170967 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 8

Conread position: 364-579
Cow position: chrX:7722022-7722239 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 80, 152

Conread position: 365-543
Cow position: chrX:40056179-40055999 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 125, 7

Conread position: 365-546
Cow position: chrX:30420917-30420736 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 150
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 365-548
Cow position: chrX:41166790-41166596 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 106, 0

Conread position: 365-571
Cow position: chrX:30042054-30041847 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 125, 19

Conread position: 366-477
Cow position: chrX:43730189-43730077 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 366-513
Cow position: chrX:2300959-2301102 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 59

Conread position: 366-521
Cow position: chrX:46146238-46146090 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 27

Conread position: 366-524
Cow position: chrX:3860596-3860440 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 26

Conread position: 366-547
Cow position: chrX:1503363-1503539 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 151
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 100, 0

Conread position: 366-547
Cow position: chrX:46700813-46700641 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 107, 0

Conread position: 366-550
Cow position: chrX:41123094-41123280 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 9, 0

Conread position: 366-555
Cow position: chrX:6563558-6563738 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 19

Conread position: 366-568
Cow position: chrX:12784-12998 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 10, 61

Conread position: 366-568
Cow position: chrX:8925733-8925932 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 88

Conread position: 366-573
Cow position: chrX:34270599-34270816 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 19

Conread position: 367-477
Cow position: chrX:24121032-24120924 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 367-529
Cow position: chrX:30840583-30840755 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 367-550
Cow position: chrX:41733162-41732988 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 367-567
Cow position: chrX:6274307-6274104 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 73, 17

Conread position: 368-553
Cow position: chrX:17525829-17525639 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 104, 150

Conread position: 368-571
Cow position: chrX:14135717-14135932 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 107, 25

Conread position: 370-477
Cow position: chrX:43014632-43014526 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 370-529
Cow position: chrX:41414763-41414924 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 370-534
Cow position: chrX:42282618-42282796 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 9

Conread position: 370-548
Cow position: chrX:11653808-11654000 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 370-549
Cow position: chrX:23940012-23939840 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 12, 97

Conread position: 370-553
Cow position: chrX:11938893-11938715 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 371-477
Cow position: chrX:19097177-19097073 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 371-544
Cow position: chrX:38549488-38549676 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 95, 0

Conread position: 371-550
Cow position: chrX:40035399-40035207 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 95, 173

Conread position: 371-561
Cow position: chrX:8759666-8759871 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 371-561
Cow position: chrX:16763884-16763686 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 103, 172

Conread position: 372-477
Cow position: chrX:37141128-37141023 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 49

Conread position: 372-529
Cow position: chrX:9954547-9954704 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 24

Conread position: 372-568
Cow position: chrX:19879080-19879268 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 51

Conread position: 372-583
Cow position: chrX:35288695-35288914 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 373-493
Cow position: chrX:27413554-27413675 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 92, 111

Conread position: 373-582
Cow position: chrX:32310148-32310351 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 94

Conread position: 374-464
Cow position: chrX:917324-917234 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 374-466
Cow position: chrX:6850254-6850346 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 374-469
Cow position: chrX:36514849-36514753 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 84
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 374-470
Cow position: chrX:31294528-31294432 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 374-471
Cow position: chrX:34502964-34503061 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 374-473
Cow position: chrX:42855502-42855601 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 86
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 374-474
Cow position: chrX:10076015-10076115 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 374-475
Cow position: chrX:29733548-29733447 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 374-476
Cow position: chrX:22914996-22914896 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 374-477
Cow position: chrX:11085019-11084916 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 94, 46

Conread position: 374-477
Cow position: chrX:37062541-37062437 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 374-477
Cow position: chrX:39220123-39220226 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 374-477
Cow position: chrX:42381068-42380965 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 374-480
Cow position: chrX:31829417-31829311 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 374-504
Cow position: chrX:28878130-28877998 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 374-518
Cow position: chrX:13853666-13853807 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 374-529
Cow position: chrX:41192748-41192903 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 101, 117

Conread position: 374-529
Cow position: chrX:41810124-41809961 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 374-529
Cow position: chrX:43779803-43779651 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 106, 62

Conread position: 374-535
Cow position: chrX:36722761-36722593 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 374-540
Cow position: chrX:35382992-35382817 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 92, 37

Conread position: 374-544
Cow position: chrX:17966385-17966553 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 138, 92

Conread position: 374-544
Cow position: chrX:45502190-45502364 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 109, 145

Conread position: 374-545
Cow position: chrX:16762815-16762998 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 374-545
Cow position: chrX:29601784-29601598 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 374-546
Cow position: chrX:32910148-32910328 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 51

Conread position: 374-547
Cow position: chrX:907990-908173 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 147
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 68, 32

Conread position: 374-547
Cow position: chrX:11326053-11325877 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 90, 63

Conread position: 374-547
Cow position: chrX:48822298-48822110 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 374-548
Cow position: chrX:16556173-16555990 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 105, 58

Conread position: 374-548
Cow position: chrX:21986247-21986068 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 100, 0

Conread position: 374-548
Cow position: chrX:29121091-29121254 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 374-549
Cow position: chrX:3806726-3806912 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 92, 0

Conread position: 374-549
Cow position: chrX:15007105-15006925 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 374-550
Cow position: chrX:31442785-31442604 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 146
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 92, 0

Conread position: 374-550
Cow position: chrX:37574884-37575051 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 374-550
Cow position: chrX:37752062-37751875 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 374-552
Cow position: chrX:9201592-9201780 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 374-553
Cow position: chrX:7646295-7646474 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 97

Conread position: 374-553
Cow position: chrX:22624520-22624698 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 102, 0

Conread position: 374-553
Cow position: chrX:46084019-46084190 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 79, 19

Conread position: 374-554
Cow position: chrX:2551135-2551314 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 148
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 25, 168

Conread position: 374-554
Cow position: chrX:6544301-6544485 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 100, 18

Conread position: 374-554
Cow position: chrX:32431668-32431838 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 374-555
Cow position: chrX:10959351-10959176 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 98, 0

Conread position: 374-555
Cow position: chrX:41871111-41871297 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 100, 122

Conread position: 374-555
Cow position: chrX:42331328-42331513 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 92, 143

Conread position: 374-556
Cow position: chrX:7277955-7278149 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 374-556
Cow position: chrX:11656125-11656320 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 102, 0

Conread position: 374-557
Cow position: chrX:38722166-38722340 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 164, 99

Conread position: 374-558
Cow position: chrX:17662551-17662378 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 374-558
Cow position: chrX:20584372-20584555 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 103, 0

Conread position: 374-559
Cow position: chrX:11454230-11454418 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 103, 57

Conread position: 374-562
Cow position: chrX:16984685-16984882 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 105, 74

Conread position: 374-563
Cow position: chrX:12437226-12437033 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 105, 30

Conread position: 374-563
Cow position: chrX:27145648-27145844 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 186

Conread position: 374-563
Cow position: chrX:33539214-33539399 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 134, 0

Conread position: 374-563
Cow position: chrX:46068715-46068514 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 96, 164

Conread position: 374-564
Cow position: chrX:1719159-1719353 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 102, 148

Conread position: 374-565
Cow position: chrX:32866919-32867120 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 374-565
Cow position: chrX:34565330-34565534 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 92, 38

Conread position: 374-566
Cow position: chrX:27270419-27270618 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 142

Conread position: 374-566
Cow position: chrX:42893970-42894172 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 92, 177

Conread position: 374-566
Cow position: chrX:46909859-46910060 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 166
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 103, 149

Conread position: 374-568
Cow position: chrX:19717565-19717762 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 12

Conread position: 374-569
Cow position: chrX:26205404-26205204 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 61, 66

Conread position: 374-571
Cow position: chrX:161456-161656 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 84, 144

Conread position: 374-571
Cow position: chrX:33000949-33001155 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 80, 0

Conread position: 374-574
Cow position: chrX:17956735-17956948 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 99, 33

Conread position: 374-575
Cow position: chrX:20887597-20887388 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 87, 148

Conread position: 374-576
Cow position: chrX:35885683-35885471 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 101, 0

Conread position: 374-578
Cow position: chrX:2314575-2314354 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 81, 76

Conread position: 374-580
Cow position: chrX:20339848-20339629 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 164
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 92, 51

Conread position: 374-581
Cow position: chrX:39352830-39353038 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 99, 27

Conread position: 374-583
Cow position: chrX:12304605-12304812 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 79, 72

Conread position: 374-583
Cow position: chrX:35278373-35278579 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 166, 88

Conread position: 374-584
Cow position: chrX:15545926-15546151 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 81, 76

Conread position: 374-584
Cow position: chrX:42875256-42875479 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 105, 0

Conread position: 375-477
Cow position: chrX:23266460-23266563 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 375-477
Cow position: chrX:27667470-27667572 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 375-477
Cow position: chrX:37910490-37910591 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 375-478
Cow position: chrX:23498632-23498532 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 375-523
Cow position: chrX:41068770-41068928 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 375-540
Cow position: chrX:27075006-27074826 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 375-555
Cow position: chrX:31729487-31729679 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 375-560
Cow position: chrX:5026301-5026496 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 375-562
Cow position: chrX:1499710-1499901 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 65, 0

Conread position: 375-571
Cow position: chrX:46072772-46072573 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 162
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 375-579
Cow position: chrX:27511473-27511679 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 155

Conread position: 376-545
Cow position: chrX:42432463-42432283 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 33

Conread position: 376-572
Cow position: chrX:25602376-25602566 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 48

Conread position: 377-582
Cow position: chrX:32821075-32821279 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 111, 98

Conread position: 378-470
Cow position: chrX:20743652-20743744 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 378-476
Cow position: chrX:30831285-30831187 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 378-477
Cow position: chrX:11181148-11181049 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 378-477
Cow position: chrX:27393978-27393879 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 87
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 378-484
Cow position: chrX:17888375-17888269 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 378-511
Cow position: chrX:23188736-23188593 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 378-528
Cow position: chrX:1615995-1615845 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 130
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 96, 61

Conread position: 378-534
Cow position: chrX:20151904-20152067 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 378-538
Cow position: chrX:16291971-16291815 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 133, 45

Conread position: 378-539
Cow position: chrX:15329691-15329846 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 378-543
Cow position: chrX:11762953-11762783 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 141
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 96, 0

Conread position: 378-543
Cow position: chrX:17964474-17964317 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 69, 73

Conread position: 378-543
Cow position: chrX:25338236-25338392 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 45

Conread position: 378-546
Cow position: chrX:30543236-30543077 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 378-547
Cow position: chrX:43426343-43426502 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 88, 0

Conread position: 378-548
Cow position: chrX:11614742-11614908 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 378-548
Cow position: chrX:39339057-39338895 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 160, 88

Conread position: 378-548
Cow position: chrX:45429974-45429798 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 88, 162

Conread position: 378-549
Cow position: chrX:4467015-4467187 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 163, 96

Conread position: 378-549
Cow position: chrX:14973698-14973523 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 146
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 88, 0

Conread position: 378-549
Cow position: chrX:23497643-23497463 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 145
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 84, 0

Conread position: 378-549
Cow position: chrX:32732744-32732914 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 15, 101

Conread position: 378-549
Cow position: chrX:35413658-35413828 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 78, 133

Conread position: 378-549
Cow position: chrX:39415322-39415156 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 88, 0

Conread position: 378-550
Cow position: chrX:23108089-23108262 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 101, 0

Conread position: 378-550
Cow position: chrX:34792263-34792088 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 37

Conread position: 378-550
Cow position: chrX:42461570-42461391 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 56

Conread position: 378-552
Cow position: chrX:4825784-4825611 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 93, 30

Conread position: 378-554
Cow position: chrX:42539607-42539786 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 58

Conread position: 378-558
Cow position: chrX:37140517-37140693 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 147
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 166, 61

Conread position: 378-561
Cow position: chrX:42011329-42011506 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 88, 0

Conread position: 378-565
Cow position: chrX:41238306-41238112 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 88, 14

Conread position: 378-566
Cow position: chrX:6203589-6203772 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 378-574
Cow position: chrX:41674152-41674358 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 151

Conread position: 378-575
Cow position: chrX:39126374-39126560 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 378-576
Cow position: chrX:29874322-29874132 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 378-577
Cow position: chrX:27306502-27306699 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 164, 0

Conread position: 378-581
Cow position: chrX:40336959-40337177 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 90, 15

Conread position: 378-582
Cow position: chrX:25713844-25714041 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 158
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 378-584
Cow position: chrX:38964156-38964369 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 93, 0

Conread position: 379-474
Cow position: chrX:25282989-25282894 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 379-540
Cow position: chrX:39832465-39832617 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 379-543
Cow position: chrX:126816-126986 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 379-549
Cow position: chrX:2936006-2936187 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 379-549
Cow position: chrX:25925593-25925422 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 97, 139

Conread position: 379-555
Cow position: chrX:42927775-42927590 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 95, 131

Conread position: 379-559
Cow position: chrX:20340594-20340411 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 162, 0

Conread position: 379-562
Cow position: chrX:23088904-23089081 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 111, 13

Conread position: 379-567
Cow position: chrX:34837015-34836819 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 145

Conread position: 379-577
Cow position: chrX:6907360-6907161 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 78

Conread position: 379-583
Cow position: chrX:46587871-46588089 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 87, 122

Conread position: 380-474
Cow position: chrX:24547451-24547357 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 380-531
Cow position: chrX:37119643-37119791 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 128
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 76, 0

Conread position: 380-576
Cow position: chrX:18196066-18196265 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 144, 52

Conread position: 381-561
Cow position: chrX:28923080-28923258 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 131

Conread position: 381-567
Cow position: chrX:41010949-41011141 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 87, 140

Conread position: 382-477
Cow position: chrX:40543469-40543376 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 382-572
Cow position: chrX:42482722-42482532 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 80, 50

Conread position: 383-562
Cow position: chrX:4152978-4152797 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 92, 0

Conread position: 384-562
Cow position: chrX:41199278-41199471 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 384-566
Cow position: chrX:26720630-26720441 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 140

Conread position: 385-555
Cow position: chrX:10305296-10305130 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 93, 121

Conread position: 385-555
Cow position: chrX:15100038-15100220 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 124

Conread position: 385-563
Cow position: chrX:39489136-39488963 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 126, 51

Conread position: 386-545
Cow position: chrX:38560615-38560780 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 386-554
Cow position: chrX:13177420-13177246 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 93, 137

Conread position: 386-566
Cow position: chrX:4289500-4289687 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 386-583
Cow position: chrX:6599726-6599528 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 100, 124

Conread position: 386-584
Cow position: chrX:31436530-31436737 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 89, 162

Conread position: 387-470
Cow position: chrX:40355088-40355171 (view UCSC Genome Browser custom track)
Alignm length: 84
Alignm identity: 74
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 387-540
Cow position: chrX:20881886-20881736 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 387-544
Cow position: chrX:18964772-18964605 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 387-547
Cow position: chrX:37186219-37186371 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 387-548
Cow position: chrX:17952918-17952763 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 387-554
Cow position: chrX:30483952-30483791 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 387-554
Cow position: chrX:36009855-36009697 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 387-556
Cow position: chrX:18812166-18812336 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 89, 155

Conread position: 388-557
Cow position: chrX:20752280-20752444 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 90, 40

Conread position: 389-488
Cow position: chrX:26626832-26626733 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 389-540
Cow position: chrX:1727912-1727766 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 389-540
Cow position: chrX:40263740-40263893 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 112, 73

Conread position: 391-549
Cow position: chrX:31273264-31273416 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 393-498
Cow position: chrX:1102080-1102185 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 393-555
Cow position: chrX:5487876-5487708 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 393-557
Cow position: chrX:39642559-39642384 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 85, 36

Conread position: 393-564
Cow position: chrX:11529406-11529588 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 396-561
Cow position: chrX:25441478-25441314 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 114

Conread position: 396-566
Cow position: chrX:44145774-44145605 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 144, 77

Conread position: 401-574
Cow position: chrX:24277390-24277561 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 0

Conread position: 403-537
Cow position: chrX:25420404-25420546 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 403-561
Cow position: chrX:40556386-40556215 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 404-553
Cow position: chrX:29675573-29675718 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 19

Conread position: 405-562
Cow position: chrX:35029851-35029689 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 61, 132

Conread position: 405-576
Cow position: chrX:1571514-1571334 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 69, 0

Conread position: 406-582
Cow position: chrX:14900426-14900243 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 410-543
Cow position: chrX:34367064-34367198 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 75

Conread position: 411-564
Cow position: chrX:4390460-4390317 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 411-581
Cow position: chrX:42311745-42311919 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 109

Conread position: 413-552
Cow position: chrX:20710255-20710395 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 117
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 416-577
Cow position: chrX:5638072-5637919 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 422-563
Cow position: chrX:26956460-26956311 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 425-547
Cow position: chrX:22284785-22284915 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 430-562
Cow position: chrX:13892917-13893052 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 42, 116

Conread position: 438-554
Cow position: chrX:29134900-29135014 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 456-582
Cow position: chrX:41906750-41906623 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 461-577
Cow position: chrX:40480702-40480587 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 79, 0

Conread position: 474-548
Cow position: chrX:42164571-42164645 (view UCSC Genome Browser custom track)
Alignm length: 75
Alignm identity: 69
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 474-568
Cow position: chrX:38080307-38080400 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 474-569
Cow position: chrX:25238766-25238862 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 474-582
Cow position: chrX:25282855-25282746 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 92
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 476-554
Cow position: chrX:33151764-33151686 (view UCSC Genome Browser custom track)
Alignm length: 79
Alignm identity: 72
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.