Cow genome map

Conread name: rmed12c_c19.y1

Conread position: 1-278
Cow position: chr28:22645855-22645586 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 132

Conread position: 110-446
Cow position: chr28:4186286-4185955 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 121, 160

Conread position: 169-449
Cow position: chr28:11007058-11006772 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 185
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 91

Conread position: 212-447
Cow position: chr28:19127891-19128121 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 100

Conread position: 221-447
Cow position: chr28:19038750-19038971 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 87

Conread position: 229-436
Cow position: chr28:23676578-23676372 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 64

Conread position: 229-446
Cow position: chr28:3494619-3494404 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 128, 21

Conread position: 229-446
Cow position: chr28:9109465-9109265 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 185, 25

Conread position: 253-447
Cow position: chr28:7964445-7964630 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 160, 20

Conread position: 254-444
Cow position: chr28:21118919-21118728 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 159, 57

Conread position: 254-450
Cow position: chr28:2524180-2523988 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 15, 57

Conread position: 257-449
Cow position: chr28:9426122-9426304 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 153, 36

Conread position: 257-449
Cow position: chr28:24698932-24698736 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 60

Conread position: 257-450
Cow position: chr28:3725977-3726164 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 156, 50

Conread position: 259-456
Cow position: chr28:659057-659255 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 25, 49

Conread position: 261-446
Cow position: chr28:9705887-9705699 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 48

Conread position: 262-446
Cow position: chr28:9639880-9639699 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 33, 49

Conread position: 262-446
Cow position: chr28:10606408-10606585 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 151, 10

Conread position: 262-449
Cow position: chr28:19395090-19394917 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 46

Conread position: 262-450
Cow position: chr28:5818065-5817887 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 27, 46

Conread position: 262-451
Cow position: chr28:11239083-11239276 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 48

Conread position: 264-444
Cow position: chr28:27445351-27445522 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 132, 43

Conread position: 265-439
Cow position: chr28:26943924-26944098 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 143, 46

Conread position: 265-443
Cow position: chr28:16159649-16159819 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 148, 6

Conread position: 265-444
Cow position: chr28:30293365-30293538 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 9

Conread position: 265-445
Cow position: chr28:22332757-22332578 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 144, 43

Conread position: 265-447
Cow position: chr28:17620135-17620313 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 46

Conread position: 265-449
Cow position: chr28:20174059-20173885 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 126, 22

Conread position: 265-450
Cow position: chr28:34464146-34463960 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 47

Conread position: 266-429
Cow position: chr28:5294780-5294936 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 148, 41

Conread position: 266-446
Cow position: chr28:4307664-4307848 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 266-449
Cow position: chr28:11197443-11197629 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 6

Conread position: 267-439
Cow position: chr28:20046764-20046607 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 41

Conread position: 267-444
Cow position: chr28:777897-777726 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 141, 36

Conread position: 267-447
Cow position: chr28:2077721-2077548 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 146, 22

Conread position: 267-447
Cow position: chr28:6358189-6358366 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 113, 40

Conread position: 267-449
Cow position: chr28:11866446-11866619 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 41

Conread position: 267-450
Cow position: chr28:26826453-26826264 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 268-444
Cow position: chr28:34843352-34843524 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 146, 37

Conread position: 268-447
Cow position: chr28:15272044-15272225 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 145, 0

Conread position: 269-446
Cow position: chr28:5577749-5577578 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 100, 18

Conread position: 269-446
Cow position: chr28:24082489-24082319 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 145, 38

Conread position: 269-447
Cow position: chr28:13195526-13195703 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 147, 45

Conread position: 271-427
Cow position: chr28:8164995-8165148 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 18, 40

Conread position: 271-445
Cow position: chr28:5232157-5231988 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 142, 40

Conread position: 271-456
Cow position: chr28:13370917-13371107 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 135, 44

Conread position: 272-447
Cow position: chr28:7644962-7644788 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 37

Conread position: 272-447
Cow position: chr28:13356140-13356324 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 272-449
Cow position: chr28:3311004-3311179 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 147
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 20, 36

Conread position: 273-437
Cow position: chr28:10480586-10480749 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 10, 36

Conread position: 274-427
Cow position: chr28:5428541-5428686 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 39

Conread position: 274-447
Cow position: chr28:8347948-8347779 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 135, 33

Conread position: 274-447
Cow position: chr28:8359121-8358945 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 274-447
Cow position: chr28:10615736-10615898 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 139, 33

Conread position: 275-446
Cow position: chr28:3678571-3678411 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 138, 18

Conread position: 275-446
Cow position: chr28:17740038-17739871 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 139, 35

Conread position: 275-446
Cow position: chr28:26960699-26960860 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 20, 33

Conread position: 275-447
Cow position: chr28:3143672-3143830 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 139, 32

Conread position: 275-447
Cow position: chr28:4643557-4643722 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 138, 35

Conread position: 275-447
Cow position: chr28:5674086-5673923 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 14, 33

Conread position: 275-447
Cow position: chr28:16200527-16200695 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 146
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 138, 32

Conread position: 275-447
Cow position: chr28:28903345-28903512 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 33

Conread position: 275-449
Cow position: chr28:5200046-5199870 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 40

Conread position: 275-449
Cow position: chr28:9677876-9677715 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 138, 32

Conread position: 275-449
Cow position: chr28:10959012-10958848 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 139, 32

Conread position: 275-449
Cow position: chr28:18761795-18761957 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 275-450
Cow position: chr28:13048062-13048239 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 32, 37

Conread position: 275-456
Cow position: chr28:1654872-1655054 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 139, 39

Conread position: 275-460
Cow position: chr28:19015913-19015741 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 276-442
Cow position: chr28:11743616-11743770 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 276-445
Cow position: chr28:6283278-6283441 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 134, 31

Conread position: 276-445
Cow position: chr28:9100141-9099984 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 32

Conread position: 276-445
Cow position: chr28:11398582-11398747 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 137, 31

Conread position: 276-445
Cow position: chr28:11828742-11828912 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 138, 41

Conread position: 276-446
Cow position: chr28:8787751-8787589 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 138, 31

Conread position: 276-447
Cow position: chr28:117545-117715 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 13, 32

Conread position: 276-447
Cow position: chr28:118827-118657 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 32

Conread position: 276-447
Cow position: chr28:5144302-5144473 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 89, 31

Conread position: 276-447
Cow position: chr28:5552490-5552667 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 38

Conread position: 276-447
Cow position: chr28:11307305-11307470 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 34

Conread position: 276-447
Cow position: chr28:21008454-21008617 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 138, 38

Conread position: 276-449
Cow position: chr28:4870584-4870759 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 95, 31

Conread position: 276-450
Cow position: chr28:23650013-23650187 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 138, 34

Conread position: 277-403
Cow position: chr28:27941570-27941689 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 277-438
Cow position: chr28:22278412-22278575 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 14, 32

Conread position: 277-444
Cow position: chr28:3759208-3759041 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 30

Conread position: 277-444
Cow position: chr28:22133120-22132961 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 12, 31

Conread position: 277-446
Cow position: chr28:4163368-4163534 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 12, 34

Conread position: 277-446
Cow position: chr28:5436875-5437036 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 277-446
Cow position: chr28:6301296-6301130 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 142
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 13, 31

Conread position: 277-447
Cow position: chr28:2892468-2892300 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 34

Conread position: 277-447
Cow position: chr28:5609707-5609869 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 133, 30

Conread position: 277-447
Cow position: chr28:5630311-5630146 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 140
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 12, 31

Conread position: 277-447
Cow position: chr28:7697767-7697934 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 12, 31

Conread position: 277-447
Cow position: chr28:14242908-14242741 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 29

Conread position: 277-447
Cow position: chr28:17737938-17738105 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 12, 31

Conread position: 277-447
Cow position: chr28:32014997-32014832 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 142
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 31

Conread position: 277-448
Cow position: chr28:10495088-10495254 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 12, 31

Conread position: 277-449
Cow position: chr28:5273212-5273384 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 16

Conread position: 277-449
Cow position: chr28:8827376-8827206 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 31

Conread position: 278-420
Cow position: chr28:6124049-6124186 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 30

Conread position: 278-440
Cow position: chr28:22182922-22183086 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 33

Conread position: 278-446
Cow position: chr28:4013293-4013133 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 135, 29

Conread position: 278-447
Cow position: chr28:10053122-10053277 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 136, 29

Conread position: 278-447
Cow position: chr28:15362789-15362627 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 30

Conread position: 278-448
Cow position: chr28:6563683-6563850 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 146
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 11, 30

Conread position: 278-464
Cow position: chr28:34877762-34877950 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 29

Conread position: 279-442
Cow position: chr28:10896450-10896294 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 28

Conread position: 279-446
Cow position: chr28:29500615-29500449 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 88, 14

Conread position: 279-449
Cow position: chr28:8259841-8259674 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 101, 28

Conread position: 279-449
Cow position: chr28:19221927-19222105 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 279-454
Cow position: chr28:8112051-8112232 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 35, 176

Conread position: 280-444
Cow position: chr28:3011058-3011220 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 31

Conread position: 280-447
Cow position: chr28:19217020-19216869 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 132, 27

Conread position: 280-450
Cow position: chr28:24064684-24064853 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 27

Conread position: 281-439
Cow position: chr28:13174347-13174500 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 133, 26

Conread position: 281-447
Cow position: chr28:17680832-17680670 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 138
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 129, 26

Conread position: 281-456
Cow position: chr28:13527405-13527234 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 99, 26

Conread position: 281-460
Cow position: chr28:11346282-11346451 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 133, 26

Conread position: 282-428
Cow position: chr28:23460349-23460209 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 10

Conread position: 282-434
Cow position: chr28:11814873-11815015 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 131, 25

Conread position: 282-443
Cow position: chr28:3484792-3484632 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 100, 24

Conread position: 282-446
Cow position: chr28:3423983-3423826 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 131, 25

Conread position: 282-449
Cow position: chr28:4231016-4230857 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 132, 28

Conread position: 282-449
Cow position: chr28:11411333-11411488 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 132, 25

Conread position: 282-456
Cow position: chr28:22085340-22085502 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 130, 10

Conread position: 283-408
Cow position: chr28:16964758-16964878 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 25

Conread position: 283-442
Cow position: chr28:14657921-14657766 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 131, 24

Conread position: 283-446
Cow position: chr28:4937034-4937193 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 126, 27

Conread position: 283-447
Cow position: chr28:4282284-4282443 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 130, 24

Conread position: 283-447
Cow position: chr28:21744917-21744763 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 123, 24

Conread position: 283-447
Cow position: chr28:32284035-32284192 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 24

Conread position: 283-449
Cow position: chr28:34830359-34830200 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 131, 24

Conread position: 283-456
Cow position: chr28:34230436-34230268 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 131, 22

Conread position: 284-443
Cow position: chr28:30921853-30922008 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 130, 26

Conread position: 284-446
Cow position: chr28:7557523-7557685 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 96, 20

Conread position: 284-446
Cow position: chr28:10252711-10252868 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 126, 23

Conread position: 284-456
Cow position: chr28:19262380-19262547 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 130, 23

Conread position: 285-443
Cow position: chr28:21263357-21263209 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 128, 22

Conread position: 285-460
Cow position: chr28:16856903-16857071 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 129, 22

Conread position: 287-447
Cow position: chr28:20968375-20968532 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 20

Conread position: 288-439
Cow position: chr28:751428-751283 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 19

Conread position: 288-440
Cow position: chr28:7523215-7523361 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 123, 22

Conread position: 288-444
Cow position: chr28:8716180-8716337 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 80, 19

Conread position: 288-460
Cow position: chr28:19994746-19994914 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 108, 19

Conread position: 289-441
Cow position: chr28:24767612-24767458 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 22

Conread position: 289-449
Cow position: chr28:4074176-4074015 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 18

Conread position: 295-447
Cow position: chr28:11309891-11310052 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 311-447
Cow position: chr28:19118155-19118017 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 78, 70

Conread position: 311-449
Cow position: chr28:6322002-6321863 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 311-449
Cow position: chr28:7413846-7413705 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 312-447
Cow position: chr28:12974066-12973929 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 0

Conread position: 312-449
Cow position: chr28:31223375-31223515 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 102, 75

Conread position: 313-423
Cow position: chr28:8141839-8141727 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 24

Conread position: 313-440
Cow position: chr28:2821442-2821313 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 313-447
Cow position: chr28:4138486-4138623 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 313-447
Cow position: chr28:5188249-5188381 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 100, 53

Conread position: 313-447
Cow position: chr28:5236055-5235929 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 313-447
Cow position: chr28:8655985-8656118 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 114
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 101, 32

Conread position: 313-447
Cow position: chr28:11562062-11562198 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 313-447
Cow position: chr28:11827869-11827733 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 97, 0

Conread position: 313-447
Cow position: chr28:18608184-18608320 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 313-447
Cow position: chr28:26269580-26269434 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 313-447
Cow position: chr28:26982555-26982690 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 42

Conread position: 313-449
Cow position: chr28:5236414-5236558 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 313-449
Cow position: chr28:12951597-12951463 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 101, 45

Conread position: 313-449
Cow position: chr28:13160362-13160500 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 313-449
Cow position: chr28:27721877-27721744 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 313-456
Cow position: chr28:30385336-30385192 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 101, 135

Conread position: 313-460
Cow position: chr28:18369832-18369982 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 314-447
Cow position: chr28:16252228-16252357 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 99, 52

Conread position: 314-449
Cow position: chr28:12672281-12672419 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 314-450
Cow position: chr28:2825602-2825464 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 315-447
Cow position: chr28:26743810-26743674 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 315-448
Cow position: chr28:16569983-16569852 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 47

Conread position: 316-448
Cow position: chr28:16419704-16419572 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 64

Conread position: 316-456
Cow position: chr28:3200640-3200499 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 134

Conread position: 317-447
Cow position: chr28:4022853-4022721 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 96, 0

Conread position: 321-447
Cow position: chr28:11559460-11559584 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 21

Conread position: 321-447
Cow position: chr28:20281926-20281806 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 36

Conread position: 321-447
Cow position: chr28:21363916-21363788 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 321-447
Cow position: chr28:28765727-28765855 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 111
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 92, 0

Conread position: 322-444
Cow position: chr28:7350825-7350705 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 54

Conread position: 322-447
Cow position: chr28:16386349-16386470 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 92, 5

Conread position: 322-447
Cow position: chr28:20397196-20397322 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 88, 57

Conread position: 322-447
Cow position: chr28:22307181-22307057 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 323-447
Cow position: chr28:2819943-2819823 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 90, 44

Conread position: 323-447
Cow position: chr28:4881072-4881192 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 44

Conread position: 325-447
Cow position: chr28:3729847-3729971 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 327-445
Cow position: chr28:13448291-13448173 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 87, 54

Conread position: 334-447
Cow position: chr28:8167193-8167306 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 45

Conread position: 338-449
Cow position: chr28:2090689-2090577 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 76, 53

Show alignments to all cow chromosomes.