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Cow genome map

           
Conread name:
           
rmed21c_p2.y1
        

               
Conread position:
               
1-223
               

               
Cow position:
               
chr29:9310830-9310611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
41, 105
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr29:17436974-17436762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
2-121
               

               
Cow position:
               
chr29:36058929-36059049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
2-168
               

               
Cow position:
               
chr29:11685395-11685236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 99
               

               
Conread position:
               
2-169
               

               
Cow position:
               
chr29:2070970-2071136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
39, 119
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr29:35189835-35189628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 101
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr29:1933344-1933557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr29:4121082-4120865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
40, 103
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr29:8163601-8163818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
39, 105
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr29:16735452-16735234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr29:35458543-35458767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr29:40350854-40351089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
36, 105
               

               
Conread position:
               
3-98
               

               
Cow position:
               
chr29:16164884-16164980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
3-168
               

               
Cow position:
               
chr29:16164210-16164367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr29:1008045-1007838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr29:2262756-2262979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 206
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr29:34675782-34675996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 64
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr29:25432679-25432422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 64
               

               
Conread position:
               
4-118
               

               
Cow position:
               
chr29:35832986-35832870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
4-123
               

               
Cow position:
               
chr29:2720831-2720951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
4-166
               

               
Cow position:
               
chr29:26777234-26777079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr29:35281696-35281515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 102
               

               
Conread position:
               
4-192
               

               
Cow position:
               
chr29:30294647-30294831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr29:35070849-35071064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chr29:35677317-35677530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
35, 102
               

               
Conread position:
               
4-222
               

               
Cow position:
               
chr29:26764601-26764378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 140
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr29:28840396-28840179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
5-215
               

               
Cow position:
               
chr29:27859011-27858809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
5-217
               

               
Cow position:
               
chr29:22018963-22019171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 102
               

               
Conread position:
               
5-221
               

               
Cow position:
               
chr29:5520261-5520472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
36, 101
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr29:31489547-31489330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 92
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr29:41531074-41530861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 100
               

               
Conread position:
               
6-133
               

               
Cow position:
               
chr29:659503-659374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
6-199
               

               
Cow position:
               
chr29:2219610-2219422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 102
               

               
Conread position:
               
6-220
               

               
Cow position:
               
chr29:19949527-19949324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
36, 100
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chr29:16609972-16609759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chr29:23874684-23874471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr29:22729786-22729582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 90
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr29:45005412-45005615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr29:14375658-14375868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr29:14746999-14746793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
7-223
               

               
Cow position:
               
chr29:24026923-24026705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
8-153
               

               
Cow position:
               
chr29:2623260-2623410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
8-159
               

               
Cow position:
               
chr29:34483405-34483549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 97
               

               
Conread position:
               
8-219
               

               
Cow position:
               
chr29:30188111-30188336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
33, 214
               

               
Conread position:
               
8-223
               

               
Cow position:
               
chr29:9800879-9800661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 142
               

               
Conread position:
               
8-223
               

               
Cow position:
               
chr29:25288700-25288912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
8-229
               

               
Cow position:
               
chr29:22175910-22175685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
9-219
               

               
Cow position:
               
chr29:28949204-28948989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
32, 192
               

               
Conread position:
               
9-223
               

               
Cow position:
               
chr29:31929205-31929000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
9-223
               

               
Cow position:
               
chr29:39329364-39329592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
9-231
               

               
Cow position:
               
chr29:8798793-8799012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
160, 32
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr29:5994870-5995084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
32, 48
               

               
Conread position:
               
10-168
               

               
Cow position:
               
chr29:22705261-22705104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
10-187
               

               
Cow position:
               
chr29:31942613-31942432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
10-220
               

               
Cow position:
               
chr29:9709911-9709709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
30, 88
               

               
Conread position:
               
10-223
               

               
Cow position:
               
chr29:12680376-12680167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
10-229
               

               
Cow position:
               
chr29:11042661-11042436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
10-229
               

               
Cow position:
               
chr29:16196073-16195844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 115
               

               
Conread position:
               
11-213
               

               
Cow position:
               
chr29:11894917-11894719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
11-219
               

               
Cow position:
               
chr29:11397696-11397911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 128
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr29:22518904-22519114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 51
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr29:32799486-32799698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
30, 113
               

               
Conread position:
               
11-223
               

               
Cow position:
               
chr29:8634869-8634665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 72
               

               
Conread position:
               
11-223
               

               
Cow position:
               
chr29:27683748-27683941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
11-223
               

               
Cow position:
               
chr29:36210367-36210157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 110
               

               
Conread position:
               
11-223
               

               
Cow position:
               
chr29:39038051-39038258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
25, 96
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chr29:34744413-34744623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
11-257
               

               
Cow position:
               
chr29:19910180-19909933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 107
               

               
Conread position:
               
12-123
               

               
Cow position:
               
chr29:29176147-29176260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
12-207
               

               
Cow position:
               
chr29:43080392-43080591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
12-219
               

               
Cow position:
               
chr29:35292302-35292107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 94
               

               
Conread position:
               
12-221
               

               
Cow position:
               
chr29:28420973-28420769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
29, 95
               

               
Conread position:
               
12-223
               

               
Cow position:
               
chr29:4440989-4441194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
12-223
               

               
Cow position:
               
chr29:4520546-4520351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
158, 25
               

               
Conread position:
               
13-187
               

               
Cow position:
               
chr29:36546567-36546735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
13-221
               

               
Cow position:
               
chr29:16200261-16200465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
13-223
               

               
Cow position:
               
chr29:44684314-44684110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 95
               

               
Conread position:
               
13-229
               

               
Cow position:
               
chr29:34359609-34359816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 93
               

               
Conread position:
               
13-234
               

               
Cow position:
               
chr29:14577072-14576858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 93
               

               
Conread position:
               
13-251
               

               
Cow position:
               
chr29:26211268-26211037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
29, 94
               

               
Conread position:
               
14-197
               

               
Cow position:
               
chr29:16438558-16438742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
14-216
               

               
Cow position:
               
chr29:4070834-4070642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
14-223
               

               
Cow position:
               
chr29:19742687-19742465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
14-229
               

               
Cow position:
               
chr29:3711590-3711383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
15-212
               

               
Cow position:
               
chr29:25097059-25096851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr29:13028663-13028446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
26, 207
               

               
Conread position:
               
15-236
               

               
Cow position:
               
chr29:18579606-18579837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
26, 204
               

               
Conread position:
               
16-167
               

               
Cow position:
               
chr29:4741177-4741321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
16-196
               

               
Cow position:
               
chr29:20770556-20770382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
16-223
               

               
Cow position:
               
chr29:23220278-23220488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
18-221
               

               
Cow position:
               
chr29:38754728-38754926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 88
               

               
Conread position:
               
19-193
               

               
Cow position:
               
chr29:18605459-18605619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chr29:34600643-34600848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
22, 156
               

               
Conread position:
               
19-222
               

               
Cow position:
               
chr29:26017291-26017490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 87
               

               
Conread position:
               
19-223
               

               
Cow position:
               
chr29:684968-685162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
20, 95
               

               
Conread position:
               
20-220
               

               
Cow position:
               
chr29:16290931-16290740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
21-220
               

               
Cow position:
               
chr29:23155442-23155240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
21-222
               

               
Cow position:
               
chr29:27042477-27042288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 41
               

               
Conread position:
               
21-223
               

               
Cow position:
               
chr29:21666293-21666098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
22-168
               

               
Cow position:
               
chr29:19250549-19250401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
22-187
               

               
Cow position:
               
chr29:30366849-30367019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 51
               

               
Conread position:
               
22-218
               

               
Cow position:
               
chr29:37618514-37618321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
22-221
               

               
Cow position:
               
chr29:25475137-25474936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
150, 21
               

               
Conread position:
               
22-223
               

               
Cow position:
               
chr29:501406-501208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
26, 53
               

               
Conread position:
               
22-223
               

               
Cow position:
               
chr29:8926244-8926450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
23-219
               

               
Cow position:
               
chr29:22576973-22577164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
16, 77
               

               
Conread position:
               
23-220
               

               
Cow position:
               
chr29:2744064-2744253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
23-223
               

               
Cow position:
               
chr29:25737215-25737403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
146, 34
               

               
Conread position:
               
23-229
               

               
Cow position:
               
chr29:11434317-11434123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 47
               

               
Conread position:
               
24-182
               

               
Cow position:
               
chr29:38010646-38010491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
24-199
               

               
Cow position:
               
chr29:37990783-37990964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
24-199
               

               
Cow position:
               
chr29:43311338-43311513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
24-209
               

               
Cow position:
               
chr29:7040664-7040848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
24-218
               

               
Cow position:
               
chr29:19061558-19061758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 29
               

               
Conread position:
               
25-223
               

               
Cow position:
               
chr29:19762466-19762282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 44
               

               
Conread position:
               
25-223
               

               
Cow position:
               
chr29:38581195-38580991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 169
               

               
Conread position:
               
25-223
               

               
Cow position:
               
chr29:43088509-43088322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 68
               

               
Conread position:
               
26-174
               

               
Cow position:
               
chr29:5147837-5147692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chr29:17297340-17297149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
15, 89
               

               
Conread position:
               
26-223
               

               
Cow position:
               
chr29:18878281-18878470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
143, 34
               

               
Conread position:
               
27-140
               

               
Cow position:
               
chr29:28727025-28726911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
27-223
               

               
Cow position:
               
chr29:11562827-11562624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 43
               

               
Conread position:
               
27-223
               

               
Cow position:
               
chr29:18449937-18450127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 88
               

               
Conread position:
               
27-223
               

               
Cow position:
               
chr29:19125531-19125333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 66
               

               
Conread position:
               
27-223
               

               
Cow position:
               
chr29:19363909-19363722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 79
               

               
Conread position:
               
27-223
               

               
Cow position:
               
chr29:20167624-20167435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 40
               

               
Conread position:
               
27-223
               

               
Cow position:
               
chr29:40298795-40299009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
28-223
               

               
Cow position:
               
chr29:26540340-26540529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
28-224
               

               
Cow position:
               
chr29:36781110-36781294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
29-197
               

               
Cow position:
               
chr29:17301970-17301799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
14, 169
               

               
Conread position:
               
29-210
               

               
Cow position:
               
chr29:2730082-2730267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
29-210
               

               
Cow position:
               
chr29:31200474-31200282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
29-219
               

               
Cow position:
               
chr29:20177491-20177687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
29-223
               

               
Cow position:
               
chr29:1325645-1325454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
29-223
               

               
Cow position:
               
chr29:19756636-19756443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
29-223
               

               
Cow position:
               
chr29:24187864-24188054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
29-223
               

               
Cow position:
               
chr29:44378208-44378403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 167
               

               
Conread position:
               
29-226
               

               
Cow position:
               
chr29:21645516-21645321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
12, 84
               

               
Conread position:
               
29-228
               

               
Cow position:
               
chr29:26631248-26631048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
29-234
               

               
Cow position:
               
chr29:42771852-42771642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
12, 186
               

               
Conread position:
               
30-156
               

               
Cow position:
               
chr29:9924375-9924499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
30-220
               

               
Cow position:
               
chr29:40994681-40994876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 164
               

               
Conread position:
               
30-223
               

               
Cow position:
               
chr29:5408944-5409130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
30-223
               

               
Cow position:
               
chr29:15798149-15797963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
30-223
               

               
Cow position:
               
chr29:19187224-19187037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 69
               

               
Conread position:
               
30-223
               

               
Cow position:
               
chr29:36357326-36357140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 76
               

               
Conread position:
               
30-223
               

               
Cow position:
               
chr29:40097179-40096979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 172
               

               
Conread position:
               
30-256
               

               
Cow position:
               
chr29:629735-629515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
31-220
               

               
Cow position:
               
chr29:35737120-35737313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
31-221
               

               
Cow position:
               
chr29:17222613-17222426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 51
               

               
Conread position:
               
31-223
               

               
Cow position:
               
chr29:12783758-12783949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
32-219
               

               
Cow position:
               
chr29:30441134-30440951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
126, 85
               

               
Conread position:
               
32-229
               

               
Cow position:
               
chr29:6844414-6844629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
33-221
               

               
Cow position:
               
chr29:23819189-23819377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 64
               

               
Conread position:
               
33-249
               

               
Cow position:
               
chr29:7954769-7954982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
34-208
               

               
Cow position:
               
chr29:30743516-30743690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
34-223
               

               
Cow position:
               
chr29:5893040-5892856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
34-223
               

               
Cow position:
               
chr29:24952881-24952699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
34-223
               

               
Cow position:
               
chr29:29324227-29324409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
35-223
               

               
Cow position:
               
chr29:15796676-15796497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
134, 25
               

               
Conread position:
               
35-229
               

               
Cow position:
               
chr29:22936478-22936274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
6, 13
               

               
Conread position:
               
37-229
               

               
Cow position:
               
chr29:15947359-15947171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
132, 59
               

               
Conread position:
               
40-223
               

               
Cow position:
               
chr29:30681516-30681699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
129, 65
               

               
Conread position:
               
40-224
               

               
Cow position:
               
chr29:22335038-22335219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 43
               

               
Conread position:
               
40-228
               

               
Cow position:
               
chr29:34760214-34760410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
82, 187
               

               
Conread position:
               
41-187
               

               
Cow position:
               
chr29:7143485-7143342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
43-241
               

               
Cow position:
               
chr29:24365713-24365903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
44-222
               

               
Cow position:
               
chr29:33393871-33393690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
58-221
               

               
Cow position:
               
chr29:86835-86998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
111, 59
               

               
Conread position:
               
59-223
               

               
Cow position:
               
chr29:24051210-24051370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
111, 54
               

               
Conread position:
               
83-229
               

               
Cow position:
               
chr29:40615343-40615489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
86, 121
               

               
Conread position:
               
95-222
               

               
Cow position:
               
chr29:703074-703201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
95-241
               

               
Cow position:
               
chr29:17022292-17022144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 141
               
Show alignments to all cow chromosomes.