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Cow genome map

           
Conread name:
           
rmed21c_p2.y1
        

               
Conread position:
               
1-185
               

               
Cow position:
               
chr6:42035038-42034863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
40, 96
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr6:26408234-26408448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 106
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr6:19446521-19446307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr6:57550462-57550213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 101
               

               
Conread position:
               
2-187
               

               
Cow position:
               
chr6:54828053-54828234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
39, 103
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr6:154739-154538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
2-214
               

               
Cow position:
               
chr6:43906414-43906622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
39, 95
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr6:14263622-14263834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 104
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr6:18440211-18440421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
37, 59
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr6:60740300-60740070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr6:24776405-24776193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
39, 53
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr6:37783693-37783454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr6:8562981-8562775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr6:29852788-29853012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 82
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr6:35993875-35993637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
39, 167
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr6:55548267-55548481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr6:64432200-64431990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 91
               

               
Conread position:
               
2-223
               

               
Cow position:
               
chr6:67215037-67214802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr6:6060307-6060526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr6:53932578-53932803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
3-219
               

               
Cow position:
               
chr6:30983781-30983576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
38, 82
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr6:44543881-44544095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
3-223
               

               
Cow position:
               
chr6:45159789-45160005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 112
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr6:15587326-15587549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
36, 101
               

               
Conread position:
               
4-146
               

               
Cow position:
               
chr6:28620365-28620227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 102
               

               
Conread position:
               
4-158
               

               
Cow position:
               
chr6:456685-456831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 54
               

               
Conread position:
               
4-220
               

               
Cow position:
               
chr6:21293233-21293438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
38, 102
               

               
Conread position:
               
4-220
               

               
Cow position:
               
chr6:25434761-25434978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
101, 38
               

               
Conread position:
               
4-220
               

               
Cow position:
               
chr6:42728911-42728701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chr6:54365067-54365273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
4-223
               

               
Cow position:
               
chr6:5095277-5095489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
4-223
               

               
Cow position:
               
chr6:19293063-19292854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
38, 102
               

               
Conread position:
               
4-229
               

               
Cow position:
               
chr6:23401730-23401946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr6:8186922-8187147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 113
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr6:60057373-60057616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
5-114
               

               
Cow position:
               
chr6:16762365-16762475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
5-138
               

               
Cow position:
               
chr6:19681982-19681850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
36, 111
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr6:9452463-9452608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
5-221
               

               
Cow position:
               
chr6:8731682-8731468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
88, 56
               

               
Conread position:
               
5-221
               

               
Cow position:
               
chr6:16380812-16380599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 102
               

               
Conread position:
               
5-221
               

               
Cow position:
               
chr6:67457003-67456773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr6:37395141-37395348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
163, 35
               

               
Conread position:
               
5-228
               

               
Cow position:
               
chr6:1704058-1703849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
5-229
               

               
Cow position:
               
chr6:6201697-6201470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
5-229
               

               
Cow position:
               
chr6:10176035-10176256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 96
               

               
Conread position:
               
5-229
               

               
Cow position:
               
chr6:40262010-40262218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
6-206
               

               
Cow position:
               
chr6:10225387-10225586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
6-218
               

               
Cow position:
               
chr6:7539836-7539631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 99
               

               
Conread position:
               
6-223
               

               
Cow position:
               
chr6:62670134-62669918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 92
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr6:35180991-35181211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
6-232
               

               
Cow position:
               
chr6:62683638-62683418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
32, 81
               

               
Conread position:
               
7-192
               

               
Cow position:
               
chr6:28559801-28559621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
132, 98
               

               
Conread position:
               
7-197
               

               
Cow position:
               
chr6:10163936-10163744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
34, 98
               

               
Conread position:
               
7-206
               

               
Cow position:
               
chr6:55061132-55060931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
34, 92
               

               
Conread position:
               
7-219
               

               
Cow position:
               
chr6:21052184-21052393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 110
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr6:15974263-15974465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
163, 31
               

               
Conread position:
               
7-223
               

               
Cow position:
               
chr6:59301531-59301735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
163, 54
               

               
Conread position:
               
7-229
               

               
Cow position:
               
chr6:21475987-21475773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
8-186
               

               
Cow position:
               
chr6:16016296-16016123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
8-192
               

               
Cow position:
               
chr6:54840239-54840424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
33, 90
               

               
Conread position:
               
8-220
               

               
Cow position:
               
chr6:1475598-1475401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
8-220
               

               
Cow position:
               
chr6:3351289-3351084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
8-220
               

               
Cow position:
               
chr6:47520315-47520109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
8-222
               

               
Cow position:
               
chr6:33510050-33509843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 95
               

               
Conread position:
               
8-223
               

               
Cow position:
               
chr6:5330675-5330465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
8-223
               

               
Cow position:
               
chr6:12761541-12761332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
8-223
               

               
Cow position:
               
chr6:32453650-32453438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 111
               

               
Conread position:
               
8-223
               

               
Cow position:
               
chr6:52478150-52478358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
8-223
               

               
Cow position:
               
chr6:68376054-68376268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
8-232
               

               
Cow position:
               
chr6:44566687-44566468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
33, 82
               

               
Conread position:
               
8-236
               

               
Cow position:
               
chr6:16287806-16288018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
8-237
               

               
Cow position:
               
chr6:30122906-30123131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 89
               

               
Conread position:
               
9-209
               

               
Cow position:
               
chr6:14150121-14150313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
9-223
               

               
Cow position:
               
chr6:16091157-16090956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 94
               

               
Conread position:
               
9-223
               

               
Cow position:
               
chr6:16411873-16411667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 106
               

               
Conread position:
               
9-226
               

               
Cow position:
               
chr6:51529930-51530139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
10-156
               

               
Cow position:
               
chr6:35097233-35097374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
10-187
               

               
Cow position:
               
chr6:13653605-13653432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
31, 97
               

               
Conread position:
               
10-187
               

               
Cow position:
               
chr6:31928898-31928725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
10-188
               

               
Cow position:
               
chr6:35775744-35775569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr6:33302655-33302452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 95
               

               
Conread position:
               
10-220
               

               
Cow position:
               
chr6:21004939-21004732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
31, 109
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr6:8688591-8688792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
10-223
               

               
Cow position:
               
chr6:49607669-49607445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
11-168
               

               
Cow position:
               
chr6:58227653-58227491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
11-219
               

               
Cow position:
               
chr6:28561910-28562112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
11-223
               

               
Cow position:
               
chr6:17313996-17313788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
30, 106
               

               
Conread position:
               
11-228
               

               
Cow position:
               
chr6:66947562-66947775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 96
               

               
Conread position:
               
11-229
               

               
Cow position:
               
chr6:55417276-55417482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
127, 93
               

               
Conread position:
               
11-231
               

               
Cow position:
               
chr6:18776504-18776295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
12-168
               

               
Cow position:
               
chr6:56950474-56950311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
12-191
               

               
Cow position:
               
chr6:12711535-12711714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 148
               

               
Conread position:
               
12-219
               

               
Cow position:
               
chr6:5673651-5673437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 176
               

               
Conread position:
               
12-220
               

               
Cow position:
               
chr6:68594246-68594041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
12-221
               

               
Cow position:
               
chr6:19045884-19045677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
157, 90
               

               
Conread position:
               
12-221
               

               
Cow position:
               
chr6:24110541-24110337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
12-221
               

               
Cow position:
               
chr6:47305597-47305396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
158, 28
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr6:50452102-50451896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
158, 107
               

               
Conread position:
               
12-222
               

               
Cow position:
               
chr6:53841246-53841452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 84
               

               
Conread position:
               
12-223
               

               
Cow position:
               
chr6:13040710-13040493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
12-223
               

               
Cow position:
               
chr6:22876671-22876878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 103
               

               
Conread position:
               
12-223
               

               
Cow position:
               
chr6:24514277-24514493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
29, 94
               

               
Conread position:
               
12-229
               

               
Cow position:
               
chr6:28088790-28089002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
12-229
               

               
Cow position:
               
chr6:50771104-50771315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
12-241
               

               
Cow position:
               
chr6:16137510-16137734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
13-145
               

               
Cow position:
               
chr6:63762324-63762460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
13-165
               

               
Cow position:
               
chr6:31713733-31713580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
13-182
               

               
Cow position:
               
chr6:53138682-53138843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
13-211
               

               
Cow position:
               
chr6:50577771-50577585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
13-217
               

               
Cow position:
               
chr6:19264245-19264440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
13-218
               

               
Cow position:
               
chr6:59602959-59603150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
28, 81
               

               
Conread position:
               
13-219
               

               
Cow position:
               
chr6:49686076-49685875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
13-221
               

               
Cow position:
               
chr6:48449071-48448879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 48
               

               
Conread position:
               
13-223
               

               
Cow position:
               
chr6:21456421-21456630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
13-223
               

               
Cow position:
               
chr6:47246038-47245833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
13-223
               

               
Cow position:
               
chr6:60273755-60273958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
13-229
               

               
Cow position:
               
chr6:6965139-6965351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
13-245
               

               
Cow position:
               
chr6:7130605-7130848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
28, 221
               

               
Conread position:
               
14-215
               

               
Cow position:
               
chr6:19936313-19936509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 101
               

               
Conread position:
               
14-220
               

               
Cow position:
               
chr6:58697374-58697576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 88
               

               
Conread position:
               
14-221
               

               
Cow position:
               
chr6:4469021-4468823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
14-221
               

               
Cow position:
               
chr6:17548713-17548919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
14-223
               

               
Cow position:
               
chr6:14913979-14914183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
14-223
               

               
Cow position:
               
chr6:21183968-21184170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
14-226
               

               
Cow position:
               
chr6:16102936-16103146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
26, 93
               

               
Conread position:
               
14-227
               

               
Cow position:
               
chr6:6097994-6098218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
14-227
               

               
Cow position:
               
chr6:32336294-32336080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
27, 103
               

               
Conread position:
               
14-229
               

               
Cow position:
               
chr6:48469261-48469046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
154, 43
               

               
Conread position:
               
15-156
               

               
Cow position:
               
chr6:2617939-2618081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
15-215
               

               
Cow position:
               
chr6:34423206-34423398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
15-218
               

               
Cow position:
               
chr6:1173693-1173899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
26, 109
               

               
Conread position:
               
15-218
               

               
Cow position:
               
chr6:53546283-53546093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
15-220
               

               
Cow position:
               
chr6:2078562-2078759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
15-223
               

               
Cow position:
               
chr6:2547515-2547308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
15-223
               

               
Cow position:
               
chr6:60850953-60850753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
15-223
               

               
Cow position:
               
chr6:63066090-63065879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
155, 115
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr6:17997063-17997275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
15-235
               

               
Cow position:
               
chr6:15300586-15300789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 76
               

               
Conread position:
               
16-133
               

               
Cow position:
               
chr6:59759422-59759304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
16-165
               

               
Cow position:
               
chr6:30688258-30688398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
16-168
               

               
Cow position:
               
chr6:56664150-56663997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
16-215
               

               
Cow position:
               
chr6:693892-694090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
25, 128
               

               
Conread position:
               
16-220
               

               
Cow position:
               
chr6:48436083-48435890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 53
               

               
Conread position:
               
16-221
               

               
Cow position:
               
chr6:12965107-12964907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
16-223
               

               
Cow position:
               
chr6:15446942-15447145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
153, 22
               

               
Conread position:
               
16-223
               

               
Cow position:
               
chr6:22849999-22850202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
16-223
               

               
Cow position:
               
chr6:29775871-29775675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
24, 90
               

               
Conread position:
               
16-223
               

               
Cow position:
               
chr6:67574643-67574441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
16-228
               

               
Cow position:
               
chr6:62437670-62437463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
16-229
               

               
Cow position:
               
chr6:53711656-53711448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
16-292
               

               
Cow position:
               
chr6:68246578-68246856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 99
               

               
Conread position:
               
17-168
               

               
Cow position:
               
chr6:29291826-29291666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
17-185
               

               
Cow position:
               
chr6:38020929-38020764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
17-199
               

               
Cow position:
               
chr6:50882855-50882658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
24, 44
               

               
Conread position:
               
17-224
               

               
Cow position:
               
chr6:36570718-36570512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
17-242
               

               
Cow position:
               
chr6:14383928-14383710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 89
               

               
Conread position:
               
17-254
               

               
Cow position:
               
chr6:59297297-59297074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
24, 78
               

               
Conread position:
               
18-219
               

               
Cow position:
               
chr6:23353807-23353607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
23, 88
               

               
Conread position:
               
18-223
               

               
Cow position:
               
chr6:9736394-9736603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
23, 138
               

               
Conread position:
               
18-223
               

               
Cow position:
               
chr6:15937601-15937802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
23, 100
               

               
Conread position:
               
18-223
               

               
Cow position:
               
chr6:21869377-21869596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
18-223
               

               
Cow position:
               
chr6:22215211-22215417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
23, 107
               

               
Conread position:
               
19-187
               

               
Cow position:
               
chr6:67044470-67044647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 76
               

               
Conread position:
               
19-217
               

               
Cow position:
               
chr6:17404813-17404619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
19-219
               

               
Cow position:
               
chr6:35171864-35171662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
19-223
               

               
Cow position:
               
chr6:8600255-8600053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
19-223
               

               
Cow position:
               
chr6:67451122-67451318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
19-229
               

               
Cow position:
               
chr6:38441430-38441219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 78
               

               
Conread position:
               
19-235
               

               
Cow position:
               
chr6:12338240-12338033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
20-211
               

               
Cow position:
               
chr6:25614841-25615030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 86
               

               
Conread position:
               
20-218
               

               
Cow position:
               
chr6:47356075-47355881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
20-220
               

               
Cow position:
               
chr6:24339538-24339338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
20-223
               

               
Cow position:
               
chr6:55282043-55282241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
21-152
               

               
Cow position:
               
chr6:43540014-43540147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 125
               

               
Conread position:
               
21-213
               

               
Cow position:
               
chr6:34499007-34498801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
21-220
               

               
Cow position:
               
chr6:21535288-21535095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 88
               

               
Conread position:
               
21-220
               

               
Cow position:
               
chr6:34569664-34569463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
21-220
               

               
Cow position:
               
chr6:53460323-53460511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
21-221
               

               
Cow position:
               
chr6:18447267-18447461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
21-221
               

               
Cow position:
               
chr6:43345192-43345387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
21-223
               

               
Cow position:
               
chr6:35702079-35702292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
21-223
               

               
Cow position:
               
chr6:58725615-58725423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
21-231
               

               
Cow position:
               
chr6:6194854-6195058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 67
               

               
Conread position:
               
22-126
               

               
Cow position:
               
chr6:416427-416322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
22-168
               

               
Cow position:
               
chr6:23381419-23381558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
22-215
               

               
Cow position:
               
chr6:35743227-35743039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
22-221
               

               
Cow position:
               
chr6:18903790-18903997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
22-221
               

               
Cow position:
               
chr6:24536279-24536477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
22-221
               

               
Cow position:
               
chr6:66259984-66259784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
22-236
               

               
Cow position:
               
chr6:57168821-57168592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 200
               

               
Conread position:
               
22-247
               

               
Cow position:
               
chr6:62724805-62724583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
23-123
               

               
Cow position:
               
chr6:38419147-38419044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
23-193
               

               
Cow position:
               
chr6:40761494-40761328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
23-219
               

               
Cow position:
               
chr6:143132-143318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
23-220
               

               
Cow position:
               
chr6:15305817-15305627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 78
               

               
Conread position:
               
23-231
               

               
Cow position:
               
chr6:53765647-53765846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
23-235
               

               
Cow position:
               
chr6:37827701-37827906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
24-156
               

               
Cow position:
               
chr6:38615372-38615250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 38
               

               
Conread position:
               
24-166
               

               
Cow position:
               
chr6:23247630-23247775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
24-211
               

               
Cow position:
               
chr6:39358098-39358276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
24-215
               

               
Cow position:
               
chr6:53811831-53811643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
24-220
               

               
Cow position:
               
chr6:32006211-32006399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
24-223
               

               
Cow position:
               
chr6:18117807-18117996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
144, 81
               

               
Conread position:
               
24-228
               

               
Cow position:
               
chr6:10399663-10399860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
25-156
               

               
Cow position:
               
chr6:1929918-1929784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
25-168
               

               
Cow position:
               
chr6:57404892-57405031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
25-223
               

               
Cow position:
               
chr6:29485327-29485135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
25-223
               

               
Cow position:
               
chr6:44078759-44078571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
25-223
               

               
Cow position:
               
chr6:63168519-63168711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
26-123
               

               
Cow position:
               
chr6:35964239-35964337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
26-218
               

               
Cow position:
               
chr6:11247010-11246822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
143, 70
               

               
Conread position:
               
26-219
               

               
Cow position:
               
chr6:36939117-36938924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
15, 79
               

               
Conread position:
               
26-220
               

               
Cow position:
               
chr6:59719054-59718853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
15, 187
               

               
Conread position:
               
26-220
               

               
Cow position:
               
chr6:66979114-66978925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
26-223
               

               
Cow position:
               
chr6:8094043-8094236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
26-224
               

               
Cow position:
               
chr6:48097360-48097549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
26-228
               

               
Cow position:
               
chr6:56850260-56850068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
15, 80
               

               
Conread position:
               
27-178
               

               
Cow position:
               
chr6:40903483-40903331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
27-185
               

               
Cow position:
               
chr6:13326911-13327084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
27-222
               

               
Cow position:
               
chr6:57467841-57467650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
14, 67
               

               
Conread position:
               
27-223
               

               
Cow position:
               
chr6:4691725-4691922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
27-223
               

               
Cow position:
               
chr6:15243081-15242889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
27-223
               

               
Cow position:
               
chr6:60265926-60266130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
27-228
               

               
Cow position:
               
chr6:3937029-3936829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
28-223
               

               
Cow position:
               
chr6:16700495-16700314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
28-223
               

               
Cow position:
               
chr6:19563239-19563431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
141, 88
               

               
Conread position:
               
28-228
               

               
Cow position:
               
chr6:57545988-57546176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
28-248
               

               
Cow position:
               
chr6:25772978-25773188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
29-221
               

               
Cow position:
               
chr6:10039966-10039778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
29-223
               

               
Cow position:
               
chr6:12669338-12669152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 74
               

               
Conread position:
               
29-223
               

               
Cow position:
               
chr6:36225350-36225161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 88
               

               
Conread position:
               
29-223
               

               
Cow position:
               
chr6:41014734-41014926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
30-180
               

               
Cow position:
               
chr6:35628307-35628141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
30-187
               

               
Cow position:
               
chr6:55945717-55945875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 84
               

               
Conread position:
               
30-222
               

               
Cow position:
               
chr6:35984895-35985083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 67
               

               
Conread position:
               
30-223
               

               
Cow position:
               
chr6:10105745-10105926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
139, 30
               

               
Conread position:
               
30-223
               

               
Cow position:
               
chr6:13742226-13742041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
30-223
               

               
Cow position:
               
chr6:15058613-15058429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
140, 65
               

               
Conread position:
               
30-223
               

               
Cow position:
               
chr6:26054661-26054852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
30-223
               

               
Cow position:
               
chr6:50504695-50504509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
30-223
               

               
Cow position:
               
chr6:60186412-60186610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
31-219
               

               
Cow position:
               
chr6:57300008-57299815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
31-220
               

               
Cow position:
               
chr6:5609204-5609391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
31-229
               

               
Cow position:
               
chr6:38610212-38610014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
8, 101
               

               
Conread position:
               
31-229
               

               
Cow position:
               
chr6:57079664-57079469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
7, 66
               

               
Conread position:
               
32-199
               

               
Cow position:
               
chr6:49646060-49645885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
32-228
               

               
Cow position:
               
chr6:67951194-67951000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
33-223
               

               
Cow position:
               
chr6:19996851-19996667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
6, 73
               

               
Conread position:
               
34-155
               

               
Cow position:
               
chr6:23235420-23235295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
34-211
               

               
Cow position:
               
chr6:21350796-21350968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
7, 67
               

               
Conread position:
               
34-223
               

               
Cow position:
               
chr6:24781316-24781502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 73
               

               
Conread position:
               
34-247
               

               
Cow position:
               
chr6:18144436-18144225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
35-185
               

               
Cow position:
               
chr6:31228976-31228823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
35-222
               

               
Cow position:
               
chr6:37692983-37692804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
6, 22
               

               
Conread position:
               
35-223
               

               
Cow position:
               
chr6:5302168-5302366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
6, 182
               

               
Conread position:
               
35-223
               

               
Cow position:
               
chr6:48678856-48678660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
59, 146
               

               
Conread position:
               
36-221
               

               
Cow position:
               
chr6:65534936-65535116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
134, 68
               

               
Conread position:
               
36-232
               

               
Cow position:
               
chr6:41733867-41733676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
133, 80
               

               
Conread position:
               
38-223
               

               
Cow position:
               
chr6:17794525-17794711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
38-223
               

               
Cow position:
               
chr6:38853426-38853606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
131, 67
               

               
Conread position:
               
40-221
               

               
Cow position:
               
chr6:38207258-38207435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
130, 29
               

               
Conread position:
               
41-212
               

               
Cow position:
               
chr6:66131546-66131370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 100
               

               
Conread position:
               
41-218
               

               
Cow position:
               
chr6:61644629-61644801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
129, 63
               

               
Conread position:
               
41-223
               

               
Cow position:
               
chr6:34380589-34380762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
126, 52
               

               
Conread position:
               
41-223
               

               
Cow position:
               
chr6:42136884-42137064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 105
               

               
Conread position:
               
41-223
               

               
Cow position:
               
chr6:60517065-60516879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 158
               

               
Conread position:
               
41-229
               

               
Cow position:
               
chr6:48379384-48379568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
128, 55
               

               
Conread position:
               
42-217
               

               
Cow position:
               
chr6:5113821-5113990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
127, 63
               

               
Conread position:
               
42-217
               

               
Cow position:
               
chr6:68816396-68816226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
43-220
               

               
Cow position:
               
chr6:12091761-12091937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
93, 49
               

               
Conread position:
               
44-168
               

               
Cow position:
               
chr6:5985618-5985741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
45-229
               

               
Cow position:
               
chr6:19696032-19695853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
125, 60
               

               
Conread position:
               
46-223
               

               
Cow position:
               
chr6:1870975-1871145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
122, 58
               

               
Conread position:
               
49-220
               

               
Cow position:
               
chr6:35842879-35842714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
120, 56
               

               
Conread position:
               
69-236
               

               
Cow position:
               
chr6:31078669-31078827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
88-221
               

               
Cow position:
               
chr6:47799484-47799348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
88-223
               

               
Cow position:
               
chr6:47339163-47339303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
94-223
               

               
Cow position:
               
chr6:54990817-54990948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
95-223
               

               
Cow position:
               
chr6:60451612-60451480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
95-228
               

               
Cow position:
               
chr6:7568307-7568171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
95-229
               

               
Cow position:
               
chr6:107240-107379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
96-223
               

               
Cow position:
               
chr6:1002080-1002210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
108-223
               

               
Cow position:
               
chr6:54867688-54867570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
110-236
               

               
Cow position:
               
chr6:19519542-19519414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
113-223
               

               
Cow position:
               
chr6:47575072-47574959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
132-254
               

               
Cow position:
               
chr6:59092144-59092020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
37, 94
               
Show alignments to all cow chromosomes.