Non-Coding RNA Search

Cow genome map


           Conread name:
           rmed21c_p2.y1
        

               Conread position:
               1-184
               

               Cow position:
               chr9:39142563-39142387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               168, 48
               

               Conread position:
               1-215
               

               Cow position:
               chr9:29824818-29825037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               126, 199
               

               Conread position:
               1-229
               

               Cow position:
               chr9:34484391-34484618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               40, 96
               

               Conread position:
               1-229
               

               Cow position:
               chr9:35028365-35028141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               169, 115
               

               Conread position:
               1-265
               

               Cow position:
               chr9:24079106-24079360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               40, 99
               

               Conread position:
               2-111
               

               Cow position:
               chr9:53433102-53433212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               2-123
               

               Cow position:
               chr9:39681103-39681225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               2-134
               

               Cow position:
               chr9:53413477-53413344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               2-135
               

               Cow position:
               chr9:16137576-16137443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               39, 115
               

               Conread position:
               2-159
               

               Cow position:
               chr9:35540298-35540458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               2-174
               

               Cow position:
               chr9:1937905-1938088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               2-199
               

               Cow position:
               chr9:10144680-10144483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               34, 41
               

               Conread position:
               2-217
               

               Cow position:
               chr9:9091305-9091095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               166, 110
               

               Conread position:
               2-221
               

               Cow position:
               chr9:39148884-39149093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 99
               

               Conread position:
               2-221
               

               Cow position:
               chr9:61307078-61306861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 145
               

               Conread position:
               2-222
               

               Cow position:
               chr9:49709642-49709860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               39, 93
               

               Conread position:
               2-223
               

               Cow position:
               chr9:20416707-20416494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               167, 47
               

               Conread position:
               2-223
               

               Cow position:
               chr9:25375931-25375720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               37, 65
               

               Conread position:
               2-223
               

               Cow position:
               chr9:26279371-26279153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               39, 106
               

               Conread position:
               2-223
               

               Cow position:
               chr9:36457798-36458015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               39, 110
               

               Conread position:
               2-223
               

               Cow position:
               chr9:41728062-41728274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               39, 104
               

               Conread position:
               2-229
               

               Cow position:
               chr9:52755050-52754830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 95
               

               Conread position:
               2-231
               

               Cow position:
               chr9:32662234-32662007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               36, 112
               

               Conread position:
               2-254
               

               Cow position:
               chr9:35933012-35932773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               39, 89
               

               Conread position:
               3-156
               

               Cow position:
               chr9:6237687-6237537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 110
               

               Conread position:
               3-213
               

               Cow position:
               chr9:8573187-8573399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               3-220
               

               Cow position:
               chr9:55495186-55494973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               51, 112
               

               Conread position:
               3-221
               

               Cow position:
               chr9:41416133-41416347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 94
               

               Conread position:
               3-221
               

               Cow position:
               chr9:44584404-44584607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               38, 104
               

               Conread position:
               3-222
               

               Cow position:
               chr9:6954449-6954234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               167, 115
               

               Conread position:
               3-223
               

               Cow position:
               chr9:8562606-8562836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               38, 210
               

               Conread position:
               3-223
               

               Cow position:
               chr9:30402625-30402409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               148, 102
               

               Conread position:
               3-223
               

               Cow position:
               chr9:44396462-44396678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 103
               

               Conread position:
               3-228
               

               Cow position:
               chr9:12355588-12355808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 48
               

               Conread position:
               3-262
               

               Cow position:
               chr9:13993566-13993817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               39, 107
               

               Conread position:
               4-157
               

               Cow position:
               chr9:24784321-24784160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 141
               

               Conread position:
               4-191
               

               Cow position:
               chr9:3946342-3946155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 150
               

               Conread position:
               4-217
               

               Cow position:
               chr9:45141792-45141590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               37, 95
               

               Conread position:
               4-221
               

               Cow position:
               chr9:12337704-12337916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               37, 90
               

               Conread position:
               4-222
               

               Cow position:
               chr9:8016675-8016887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 93
               

               Conread position:
               4-223
               

               Cow position:
               chr9:1884337-1884114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               4-236
               

               Cow position:
               chr9:31215883-31216104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 101
               

               Conread position:
               4-250
               

               Cow position:
               chr9:4263284-4263048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               165, 95
               

               Conread position:
               4-253
               

               Cow position:
               chr9:26715057-26715300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               37, 94
               

               Conread position:
               5-155
               

               Cow position:
               chr9:42986508-42986341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               5-171
               

               Cow position:
               chr9:36849434-36849598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 101
               

               Conread position:
               5-187
               

               Cow position:
               chr9:35534196-35534019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               5-190
               

               Cow position:
               chr9:30194816-30194994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 100
               

               Conread position:
               5-218
               

               Cow position:
               chr9:48901030-48900825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               36, 62
               

               Conread position:
               5-220
               

               Cow position:
               chr9:6192652-6192446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 102
               

               Conread position:
               5-221
               

               Cow position:
               chr9:50310958-50310752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               36, 100
               

               Conread position:
               5-223
               

               Cow position:
               chr9:5110661-5110874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 92
               

               Conread position:
               5-223
               

               Cow position:
               chr9:23971088-23970880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               36, 89
               

               Conread position:
               5-223
               

               Cow position:
               chr9:34697497-34697286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               36, 92
               

               Conread position:
               5-231
               

               Cow position:
               chr9:5155907-5156125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               36, 59
               

               Conread position:
               5-236
               

               Cow position:
               chr9:8976631-8976384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 207
               

               Conread position:
               6-123
               

               Cow position:
               chr9:2927554-2927671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               35, 78
               

               Conread position:
               6-218
               

               Cow position:
               chr9:18342520-18342744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               6-220
               

               Cow position:
               chr9:4268197-4267969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               180
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               6-220
               

               Cow position:
               chr9:38792821-38793029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               35, 92
               

               Conread position:
               6-221
               

               Cow position:
               chr9:38624818-38624610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               35, 47
               

               Conread position:
               6-222
               

               Cow position:
               chr9:20828710-20828920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               35, 53
               

               Conread position:
               6-223
               

               Cow position:
               chr9:28392241-28392009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               35, 55
               

               Conread position:
               6-223
               

               Cow position:
               chr9:33114145-33114361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               34, 89
               

               Conread position:
               6-223
               

               Cow position:
               chr9:34410587-34410380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 100
               

               Conread position:
               6-226
               

               Cow position:
               chr9:6929989-6929772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               6-229
               

               Cow position:
               chr9:9724072-9723856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               164, 108
               

               Conread position:
               7-123
               

               Cow position:
               chr9:49225182-49225299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               7-168
               

               Cow position:
               chr9:3915341-3915508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               7-168
               

               Cow position:
               chr9:18815875-18816034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               34, 54
               

               Conread position:
               7-199
               

               Cow position:
               chr9:6169692-6169494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               7-213
               

               Cow position:
               chr9:55013534-55013326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 99
               

               Conread position:
               7-223
               

               Cow position:
               chr9:26477019-26477232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               31, 99
               

               Conread position:
               7-223
               

               Cow position:
               chr9:34286605-34286815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 99
               

               Conread position:
               7-223
               

               Cow position:
               chr9:35295502-35295706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 85
               

               Conread position:
               7-223
               

               Cow position:
               chr9:42061900-42062115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               37, 113
               

               Conread position:
               7-229
               

               Cow position:
               chr9:43679930-43680143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               162, 30
               

               Conread position:
               7-232
               

               Cow position:
               chr9:5772873-5772652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               32, 108
               

               Conread position:
               8-189
               

               Cow position:
               chr9:31625939-31626116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 98
               

               Conread position:
               8-220
               

               Cow position:
               chr9:8629104-8628905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 98
               

               Conread position:
               8-221
               

               Cow position:
               chr9:28156508-28156707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 98
               

               Conread position:
               8-221
               

               Cow position:
               chr9:41644945-41644736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               33, 98
               

               Conread position:
               8-223
               

               Cow position:
               chr9:1370743-1370944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               32, 50
               

               Conread position:
               8-223
               

               Cow position:
               chr9:23541592-23541380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               33, 155
               

               Conread position:
               8-225
               

               Cow position:
               chr9:23403599-23403836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               9-140
               

               Cow position:
               chr9:18716267-18716400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               9-168
               

               Cow position:
               chr9:16770799-16770959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               9-183
               

               Cow position:
               chr9:49830125-49830294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 69
               

               Conread position:
               9-199
               

               Cow position:
               chr9:28772950-28773131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               32, 61
               

               Conread position:
               9-202
               

               Cow position:
               chr9:2037245-2037436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               32, 97
               

               Conread position:
               9-213
               

               Cow position:
               chr9:61019556-61019356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               32, 106
               

               Conread position:
               9-219
               

               Cow position:
               chr9:31344801-31344595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               30, 106
               

               Conread position:
               9-223
               

               Cow position:
               chr9:4341347-4341143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               32, 84
               

               Conread position:
               9-223
               

               Cow position:
               chr9:33584875-33584669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               32, 97
               

               Conread position:
               9-223
               

               Cow position:
               chr9:38941628-38941416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               32, 84
               

               Conread position:
               9-229
               

               Cow position:
               chr9:9753593-9753368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               9-229
               

               Cow position:
               chr9:13670445-13670657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               32, 96
               

               Conread position:
               9-231
               

               Cow position:
               chr9:9573129-9573347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               32, 106
               

               Conread position:
               10-122
               

               Cow position:
               chr9:41701254-41701364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               31, 85
               

               Conread position:
               10-155
               

               Cow position:
               chr9:38799912-38799771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 97
               

               Conread position:
               10-216
               

               Cow position:
               chr9:31694227-31694023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               159, 86
               

               Conread position:
               10-216
               

               Cow position:
               chr9:34423428-34423631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               31, 105
               

               Conread position:
               10-220
               

               Cow position:
               chr9:28747708-28747507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               31, 87
               

               Conread position:
               10-223
               

               Cow position:
               chr9:6839800-6840009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               37, 109
               

               Conread position:
               10-223
               

               Cow position:
               chr9:58979214-58979413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               26, 92
               

               Conread position:
               10-230
               

               Cow position:
               chr9:50977446-50977229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               32, 97
               

               Conread position:
               11-123
               

               Cow position:
               chr9:28378724-28378837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               11-166
               

               Cow position:
               chr9:44526920-44527074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               30, 94
               

               Conread position:
               11-207
               

               Cow position:
               chr9:23840594-23840394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               158
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               11-223
               

               Cow position:
               chr9:61738731-61738938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               30, 95
               

               Conread position:
               11-255
               

               Cow position:
               chr9:53632115-53631880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               30, 96
               

               Conread position:
               12-220
               

               Cow position:
               chr9:42586736-42586543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               29, 94
               

               Conread position:
               12-221
               

               Cow position:
               chr9:8613401-8613197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               31, 55
               

               Conread position:
               12-221
               

               Cow position:
               chr9:8901416-8901213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               157, 93
               

               Conread position:
               12-223
               

               Cow position:
               chr9:6397974-6397767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 83
               

               Conread position:
               12-223
               

               Cow position:
               chr9:9596138-9595934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               12-223
               

               Cow position:
               chr9:23956165-23955964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               12-223
               

               Cow position:
               chr9:40215059-40215259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               29, 86
               

               Conread position:
               13-170
               

               Cow position:
               chr9:38650101-38649943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               13-180
               

               Cow position:
               chr9:43784888-43784723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               28, 87
               

               Conread position:
               13-190
               

               Cow position:
               chr9:18008936-18008768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 42
               

               Conread position:
               13-218
               

               Cow position:
               chr9:32858831-32858624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               28, 140
               

               Conread position:
               13-220
               

               Cow position:
               chr9:5104597-5104390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               28, 93
               

               Conread position:
               13-223
               

               Cow position:
               chr9:8645077-8645283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               13-223
               

               Cow position:
               chr9:13744121-13743914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               26, 93
               

               Conread position:
               13-228
               

               Cow position:
               chr9:54677070-54677285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               28, 91
               

               Conread position:
               13-231
               

               Cow position:
               chr9:31090235-31090454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 44
               

               Conread position:
               13-258
               

               Cow position:
               chr9:57117172-57116917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               14-135
               

               Cow position:
               chr9:59386997-59386876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               27, 48
               

               Conread position:
               14-207
               

               Cow position:
               chr9:34760552-34760364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               27, 93
               

               Conread position:
               14-217
               

               Cow position:
               chr9:28315238-28315439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               27, 96
               

               Conread position:
               14-220
               

               Cow position:
               chr9:19067583-19067795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               27, 152
               

               Conread position:
               14-223
               

               Cow position:
               chr9:53602027-53602235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               26, 85
               

               Conread position:
               14-237
               

               Cow position:
               chr9:52510929-52511149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               27, 103
               

               Conread position:
               15-155
               

               Cow position:
               chr9:1894202-1894067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 92
               

               Conread position:
               15-216
               

               Cow position:
               chr9:41717881-41717683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               26, 52
               

               Conread position:
               15-219
               

               Cow position:
               chr9:22447479-22447282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               166
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               26, 42
               

               Conread position:
               15-221
               

               Cow position:
               chr9:51566683-51566481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 82
               

               Conread position:
               15-223
               

               Cow position:
               chr9:3847210-3847418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               26, 68
               

               Conread position:
               15-223
               

               Cow position:
               chr9:26102550-26102739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               15-223
               

               Cow position:
               chr9:32670131-32669931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               26, 42
               

               Conread position:
               15-223
               

               Cow position:
               chr9:39011652-39011453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               26, 46
               

               Conread position:
               15-223
               

               Cow position:
               chr9:40005292-40005490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               15-223
               

               Cow position:
               chr9:59699737-59699531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               27, 48
               

               Conread position:
               15-229
               

               Cow position:
               chr9:44467555-44467316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               26, 193
               

               Conread position:
               15-229
               

               Cow position:
               chr9:51011986-51011768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               24, 110
               

               Conread position:
               15-237
               

               Cow position:
               chr9:8834316-8834098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               26, 81
               

               Conread position:
               16-203
               

               Cow position:
               chr9:13141344-13141533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 85
               

               Conread position:
               16-207
               

               Cow position:
               chr9:34264899-34265095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               25, 54
               

               Conread position:
               16-209
               

               Cow position:
               chr9:54611503-54611314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 46
               

               Conread position:
               16-221
               

               Cow position:
               chr9:12786660-12786459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 81
               

               Conread position:
               16-223
               

               Cow position:
               chr9:14975113-14974903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               23, 90
               

               Conread position:
               16-226
               

               Cow position:
               chr9:26388032-26388226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 57
               

               Conread position:
               16-230
               

               Cow position:
               chr9:32052092-32052299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 90
               

               Conread position:
               16-247
               

               Cow position:
               chr9:8537122-8537342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               25, 89
               

               Conread position:
               17-166
               

               Cow position:
               chr9:9779593-9779746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               24, 67
               

               Conread position:
               17-168
               

               Cow position:
               chr9:53390389-53390244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               24, 45
               

               Conread position:
               17-210
               

               Cow position:
               chr9:20579771-20579591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               24, 88
               

               Conread position:
               17-223
               

               Cow position:
               chr9:30477955-30477759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 78
               

               Conread position:
               17-223
               

               Cow position:
               chr9:36401843-36401649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               27, 89
               

               Conread position:
               17-236
               

               Cow position:
               chr9:33597790-33598015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               174
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               24, 221
               

               Conread position:
               17-245
               

               Cow position:
               chr9:56827277-56827510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               21, 211
               

               Conread position:
               17-265
               

               Cow position:
               chr9:58440561-58440314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               153, 60
               

               Conread position:
               18-133
               

               Cow position:
               chr9:21816349-21816466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               18-221
               

               Cow position:
               chr9:52130830-52131024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               20, 87
               

               Conread position:
               18-223
               

               Cow position:
               chr9:5068655-5068857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               23, 88
               

               Conread position:
               18-223
               

               Cow position:
               chr9:14738070-14738265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               18-223
               

               Cow position:
               chr9:19771178-19771378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               18-223
               

               Cow position:
               chr9:33219139-33218938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               163
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               23, 95
               

               Conread position:
               18-228
               

               Cow position:
               chr9:34362554-34362760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               18-246
               

               Cow position:
               chr9:35466711-35466483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               26, 91
               

               Conread position:
               18-260
               

               Cow position:
               chr9:50074987-50075228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 94
               

               Conread position:
               19-219
               

               Cow position:
               chr9:53323968-53323771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               22, 87
               

               Conread position:
               19-223
               

               Cow position:
               chr9:11123661-11123469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 87
               

               Conread position:
               19-229
               

               Cow position:
               chr9:35306530-35306323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               20-155
               

               Cow position:
               chr9:17928265-17928398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 72
               

               Conread position:
               20-166
               

               Cow position:
               chr9:11092344-11092207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               20-199
               

               Cow position:
               chr9:34279239-34279061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               20-215
               

               Cow position:
               chr9:8467879-8468065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               21, 42
               

               Conread position:
               20-216
               

               Cow position:
               chr9:22374982-22375183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               22, 41
               

               Conread position:
               20-219
               

               Cow position:
               chr9:12129128-12129319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               21, 85
               

               Conread position:
               20-220
               

               Cow position:
               chr9:13169845-13169650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               21, 86
               

               Conread position:
               20-220
               

               Cow position:
               chr9:34024519-34024712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               20-222
               

               Cow position:
               chr9:59897416-59897607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               21, 86
               

               Conread position:
               20-223
               

               Cow position:
               chr9:27279126-27279325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               20, 95
               

               Conread position:
               21-218
               

               Cow position:
               chr9:51620265-51620455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               20, 73
               

               Conread position:
               21-219
               

               Cow position:
               chr9:58719387-58719187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 175
               

               Conread position:
               21-223
               

               Cow position:
               chr9:44822501-44822308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               20, 84
               

               Conread position:
               22-168
               

               Cow position:
               chr9:34875350-34875205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               20, 84
               

               Conread position:
               22-221
               

               Cow position:
               chr9:3573286-3573480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 84
               

               Conread position:
               22-221
               

               Cow position:
               chr9:60080714-60080915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               14, 84
               

               Conread position:
               22-223
               

               Cow position:
               chr9:9551910-9552106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               22-223
               

               Cow position:
               chr9:37198952-37199143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               147, 17
               

               Conread position:
               22-223
               

               Cow position:
               chr9:46344747-46344952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               17, 79
               

               Conread position:
               22-223
               

               Cow position:
               chr9:47906463-47906265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               19, 41
               

               Conread position:
               22-229
               

               Cow position:
               chr9:8767592-8767393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               165, 93
               

               Conread position:
               22-229
               

               Cow position:
               chr9:9311681-9311881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               23-206
               

               Cow position:
               chr9:26394525-26394350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               19, 83
               

               Conread position:
               23-220
               

               Cow position:
               chr9:10118843-10118646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               18, 130
               

               Conread position:
               23-223
               

               Cow position:
               chr9:32089215-32089405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               23-223
               

               Cow position:
               chr9:34375103-34374908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               146, 83
               

               Conread position:
               23-223
               

               Cow position:
               chr9:36627945-36628134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               18, 82
               

               Conread position:
               23-229
               

               Cow position:
               chr9:9443779-9443579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               23-235
               

               Cow position:
               chr9:34283778-34283982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               146, 25
               

               Conread position:
               24-219
               

               Cow position:
               chr9:15215866-15215675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               15, 73
               

               Conread position:
               24-220
               

               Cow position:
               chr9:36491080-36490886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 124
               

               Conread position:
               24-222
               

               Cow position:
               chr9:5342422-5342233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               18, 80
               

               Conread position:
               24-229
               

               Cow position:
               chr9:22804145-22803948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               19, 83
               

               Conread position:
               25-217
               

               Cow position:
               chr9:36634329-36634517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               16, 82
               

               Conread position:
               25-220
               

               Cow position:
               chr9:9243369-9243564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               16, 82
               

               Conread position:
               25-221
               

               Cow position:
               chr9:54986335-54986141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               145, 80
               

               Conread position:
               25-223
               

               Cow position:
               chr9:28726904-28726708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               16, 119
               

               Conread position:
               25-223
               

               Cow position:
               chr9:35166994-35167192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               16, 43
               

               Conread position:
               25-223
               

               Cow position:
               chr9:52807596-52807388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               25-269
               

               Cow position:
               chr9:9461842-9461595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 44
               

               Conread position:
               26-168
               

               Cow position:
               chr9:50202380-50202521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               15, 80
               

               Conread position:
               26-216
               

               Cow position:
               chr9:54664674-54664862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               15, 80
               

               Conread position:
               26-222
               

               Cow position:
               chr9:41282838-41283030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               15, 74
               

               Conread position:
               26-223
               

               Cow position:
               chr9:24887031-24887222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               15, 80
               

               Conread position:
               26-231
               

               Cow position:
               chr9:36624102-36623901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               15, 80
               

               Conread position:
               27-182
               

               Cow position:
               chr9:34399497-34399644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 80
               

               Conread position:
               27-187
               

               Cow position:
               chr9:3369823-3369974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               14, 35
               

               Conread position:
               27-223
               

               Cow position:
               chr9:1751156-1751354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               14, 46
               

               Conread position:
               27-223
               

               Cow position:
               chr9:52513639-52513432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               27-228
               

               Cow position:
               chr9:32307407-32307209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               14, 68
               

               Conread position:
               27-228
               

               Cow position:
               chr9:54716788-54716583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               81, 13
               

               Conread position:
               28-156
               

               Cow position:
               chr9:5376391-5376258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               28-185
               

               Cow position:
               chr9:16826374-16826217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               10, 63
               

               Conread position:
               28-221
               

               Cow position:
               chr9:53061481-53061676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 89
               

               Conread position:
               28-222
               

               Cow position:
               chr9:11098623-11098438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               13, 78
               

               Conread position:
               28-223
               

               Cow position:
               chr9:17840851-17840662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 79
               

               Conread position:
               28-223
               

               Cow position:
               chr9:47214720-47214529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               58, 10
               

               Conread position:
               28-236
               

               Cow position:
               chr9:40984332-40984535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               15, 78
               

               Conread position:
               29-157
               

               Cow position:
               chr9:26693088-26692959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 78
               

               Conread position:
               29-216
               

               Cow position:
               chr9:61022448-61022632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               10, 79
               

               Conread position:
               29-222
               

               Cow position:
               chr9:30665171-30664973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               29-223
               

               Cow position:
               chr9:19718505-19718324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 75
               

               Conread position:
               29-223
               

               Cow position:
               chr9:45285710-45285519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 77
               

               Conread position:
               29-230
               

               Cow position:
               chr9:20815695-20815891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               12, 72
               

               Conread position:
               30-218
               

               Cow position:
               chr9:9686588-9686401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               11, 37
               

               Conread position:
               30-220
               

               Cow position:
               chr9:40603497-40603681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               10, 65
               

               Conread position:
               30-223
               

               Cow position:
               chr9:52267932-52267742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 75
               

               Conread position:
               30-223
               

               Cow position:
               chr9:53496933-53496738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               11, 108
               

               Conread position:
               30-223
               

               Cow position:
               chr9:56032487-56032299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 77
               

               Conread position:
               30-229
               

               Cow position:
               chr9:27345759-27345561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               164
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               31-220
               

               Cow position:
               chr9:60395218-60395035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               10, 82
               

               Conread position:
               31-223
               

               Cow position:
               chr9:55354424-55354627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               10, 18
               

               Conread position:
               32-187
               

               Cow position:
               chr9:15939499-15939351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 90
               

               Conread position:
               32-220
               

               Cow position:
               chr9:33940429-33940618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               32-222
               

               Cow position:
               chr9:16300742-16300554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 43
               

               Conread position:
               32-225
               

               Cow position:
               chr9:45749265-45749454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               138, 84
               

               Conread position:
               33-229
               

               Cow position:
               chr9:18217290-18217076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               33-236
               

               Cow position:
               chr9:41594303-41594100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 60
               

               Conread position:
               34-220
               

               Cow position:
               chr9:11427478-11427672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               34-221
               

               Cow position:
               chr9:48282028-48282216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               9, 61
               

               Conread position:
               35-223
               

               Cow position:
               chr9:34707475-34707296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               8, 71
               

               Conread position:
               37-223
               

               Cow position:
               chr9:20755921-20755744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               38-211
               

               Cow position:
               chr9:11209614-11209441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               131, 59
               

               Conread position:
               38-221
               

               Cow position:
               chr9:12226146-12225964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               131, 75
               

               Conread position:
               38-223
               

               Cow position:
               chr9:29195193-29195008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               131, 67
               

               Conread position:
               38-223
               

               Cow position:
               chr9:32773061-32773229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               38-223
               

               Cow position:
               chr9:33822956-33823134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               131, 20
               

               Conread position:
               38-229
               

               Cow position:
               chr9:31346788-31346972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               132, 66
               

               Conread position:
               38-230
               

               Cow position:
               chr9:18216073-18215886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               132, 75
               

               Conread position:
               40-150
               

               Cow position:
               chr9:46038106-46038215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               40-190
               

               Cow position:
               chr9:43281484-43281643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               40-221
               

               Cow position:
               chr9:37955333-37955157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               128, 65
               

               Conread position:
               40-228
               

               Cow position:
               chr9:27698053-27697856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               54, 129
               

               Conread position:
               41-199
               

               Cow position:
               chr9:64310937-64310784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               128, 64
               

               Conread position:
               41-221
               

               Cow position:
               chr9:7101276-7101456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               100, 106
               

               Conread position:
               41-223
               

               Cow position:
               chr9:1712866-1712690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               129, 63
               

               Conread position:
               41-223
               

               Cow position:
               chr9:5164143-5163970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               129, 15
               

               Conread position:
               41-223
               

               Cow position:
               chr9:10010654-10010826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               41-223
               

               Cow position:
               chr9:22165875-22165697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               129, 63
               

               Conread position:
               41-223
               

               Cow position:
               chr9:32955852-32955669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               128, 40
               

               Conread position:
               41-223
               

               Cow position:
               chr9:52998536-52998364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               128, 15
               

               Conread position:
               41-229
               

               Cow position:
               chr9:29185298-29185114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               126, 58
               

               Conread position:
               41-234
               

               Cow position:
               chr9:28342813-28342622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 77
               

               Conread position:
               42-229
               

               Cow position:
               chr9:3070574-3070389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               65, 69
               

               Conread position:
               43-210
               

               Cow position:
               chr9:49402492-49402659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 86
               

               Conread position:
               43-221
               

               Cow position:
               chr9:55288045-55287878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               126, 53
               

               Conread position:
               43-223
               

               Cow position:
               chr9:31514091-31513923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               129, 71
               

               Conread position:
               43-223
               

               Cow position:
               chr9:38846497-38846321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               125, 81
               

               Conread position:
               43-229
               

               Cow position:
               chr9:7859794-7859614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               182, 62
               

               Conread position:
               43-231
               

               Cow position:
               chr9:31345321-31345524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               43-241
               

               Cow position:
               chr9:56772905-56773106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               47, 155
               

               Conread position:
               45-229
               

               Cow position:
               chr9:24652245-24652427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               125, 61
               

               Conread position:
               46-156
               

               Cow position:
               chr9:36044083-36044199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               48-185
               

               Cow position:
               chr9:42482752-42482889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               120, 48
               

               Conread position:
               49-221
               

               Cow position:
               chr9:34014420-34014235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               54-223
               

               Cow position:
               chr9:33120036-33119872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               115, 52
               

               Conread position:
               73-223
               

               Cow position:
               chr9:42446121-42445967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 60
               

               Conread position:
               74-223
               

               Cow position:
               chr9:19758586-19758736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               96, 7
               

               Conread position:
               84-220
               

               Cow position:
               chr9:39758390-39758531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               94-223
               

               Cow position:
               chr9:26277715-26277844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 37
               

               Conread position:
               95-223
               

               Cow position:
               chr9:6293479-6293611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               95-223
               

               Cow position:
               chr9:11319749-11319618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               95-223
               

               Cow position:
               chr9:24243838-24243705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               96-229
               

               Cow position:
               chr9:34135601-34135739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 51
               

               Conread position:
               98-243
               

               Cow position:
               chr9:17518601-17518453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               72, 137
               

               Conread position:
               100-223
               

               Cow position:
               chr9:50139175-50139301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               103-221
               

               Cow position:
               chr9:64064470-64064349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               106-255
               

               Cow position:
               chr9:35105894-35105742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               64, 128
               

               Conread position:
               108-223
               

               Cow position:
               chr9:19902980-19903098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               108-223
               

               Cow position:
               chr9:43342229-43342347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               108-228
               

               Cow position:
               chr9:3353260-3353379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               112, 62
               

               Conread position:
               113-220
               

               Cow position:
               chr9:18003287-18003179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               132-239
               

               Cow position:
               chr9:60027119-60027228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               38, 93
               
Show alignments to all cow chromosomes.
Conread position:	1-184
Cow position:	chr9:39142563-39142387 (view UCSC Genome Browser custom track)
Alignm length:	187
Alignm identity:	142
Alignm E-value:	9e-27
Alignm gaps (pig, cow):	168, 48
Conread position:	1-215
Cow position:	chr9:29824818-29825037 (view UCSC Genome Browser custom track)
Alignm length:	221
Alignm identity:	152
Alignm E-value:	7e-24
Alignm gaps (pig, cow):	126, 199
Conread position:	1-229
Cow position:	chr9:34484391-34484618 (view UCSC Genome Browser custom track)
Alignm length:	235
Alignm identity:	173
Alignm E-value:	6e-34
Alignm gaps (pig, cow):	40, 96
Conread position:	1-265
Cow position:	chr9:24079106-24079360 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	189
Alignm E-value:	5e-32
Alignm gaps (pig, cow):	40, 99
Conread position:	2-111
Cow position:	chr9:53433102-53433212 (view UCSC Genome Browser custom track)
Alignm length:	111
Alignm identity:	88
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	39, 0
Conread position:	2-123
Cow position:	chr9:39681103-39681225 (view UCSC Genome Browser custom track)
Alignm length:	123
Alignm identity:	96
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	39, 0
Conread position:	2-134
Cow position:	chr9:53413477-53413344 (view UCSC Genome Browser custom track)
Alignm length:	134
Alignm identity:	102
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	39, 0
Conread position:	2-135
Cow position:	chr9:16137576-16137443 (view UCSC Genome Browser custom track)
Alignm length:	136
Alignm identity:	104
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	39, 115
Conread position:	2-159
Cow position:	chr9:35540298-35540458 (view UCSC Genome Browser custom track)
Alignm length:	161
Alignm identity:	121
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	40, 0
Conread position:	2-174
Cow position:	chr9:1937905-1938088 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	139
Alignm E-value:	3e-28
Alignm gaps (pig, cow):	39, 0
Conread position:	2-199
Cow position:	chr9:10144680-10144483 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	147
Alignm E-value:	8e-26
Alignm gaps (pig, cow):	34, 41
Conread position:	2-217
Cow position:	chr9:9091305-9091095 (view UCSC Genome Browser custom track)
Alignm length:	219
Alignm identity:	164
Alignm E-value:	8e-36
Alignm gaps (pig, cow):	166, 110
Conread position:	2-221
Cow position:	chr9:39148884-39149093 (view UCSC Genome Browser custom track)
Alignm length:	224
Alignm identity:	159
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	36, 99
Conread position:	2-222
Cow position:	chr9:49709642-49709860 (view UCSC Genome Browser custom track)
Alignm length:	225
Alignm identity:	154
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	39, 93
Conread position:	2-223
Cow position:	chr9:20416707-20416494 (view UCSC Genome Browser custom track)
Alignm length:	225
Alignm identity:	157
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	167, 47
Conread position:	2-229
Cow position:	chr9:52755050-52754830 (view UCSC Genome Browser custom track)
Alignm length:	233
Alignm identity:	162
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	36, 95
Conread position:	2-231
Cow position:	chr9:32662234-32662007 (view UCSC Genome Browser custom track)
Alignm length:	234
Alignm identity:	165
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	36, 112
Conread position:	2-254
Cow position:	chr9:35933012-35932773 (view UCSC Genome Browser custom track)
Alignm length:	258
Alignm identity:	184
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	39, 89
Conread position:	3-156
Cow position:	chr9:6237687-6237537 (view UCSC Genome Browser custom track)
Alignm length:	155
Alignm identity:	116
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	38, 110
Conread position:	3-213
Cow position:	chr9:8573187-8573399 (view UCSC Genome Browser custom track)
Alignm length:	218
Alignm identity:	154
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	38, 58