Cow genome map

Conread name: rmed34c_a10.y1

Conread position: 31-186
Cow position: chr1:43790066-43789906 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 37

Conread position: 34-188
Cow position: chr1:54217225-54217066 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 49, 29

Conread position: 40-188
Cow position: chr1:45310071-45310226 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 84

Conread position: 41-169
Cow position: chr1:3570109-3570243 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 24

Conread position: 42-182
Cow position: chr1:45638678-45638539 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 17

Conread position: 43-186
Cow position: chr1:34921098-34920950 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 20

Conread position: 43-188
Cow position: chr1:28678724-28678572 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 46-188
Cow position: chr1:93110414-93110566 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 46-204
Cow position: chr1:31189919-31190077 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 30

Conread position: 47-187
Cow position: chr1:92981475-92981328 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 47-217
Cow position: chr1:97622023-97622200 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 43, 156

Conread position: 48-174
Cow position: chr1:4385543-4385416 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 122

Conread position: 48-186
Cow position: chr1:57119151-57119295 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 129

Conread position: 48-187
Cow position: chr1:5278224-5278364 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 63, 17

Conread position: 48-188
Cow position: chr1:2998147-2997997 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 48-188
Cow position: chr1:20582137-20581993 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 43, 85

Conread position: 48-188
Cow position: chr1:66355517-66355665 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 48-188
Cow position: chr1:67480248-67480109 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 59, 104

Conread position: 48-237
Cow position: chr1:50307807-50308001 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 60, 142

Conread position: 49-185
Cow position: chr1:22777348-22777491 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 49-188
Cow position: chr1:39121652-39121788 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 43

Conread position: 49-188
Cow position: chr1:82076768-82076627 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 50-186
Cow position: chr1:75225107-75224966 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 50-188
Cow position: chr1:38205662-38205523 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 55, 12

Conread position: 50-188
Cow position: chr1:50261734-50261878 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 123
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 20

Conread position: 50-207
Cow position: chr1:96043814-96043645 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 75

Conread position: 51-187
Cow position: chr1:55181634-55181777 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 51-187
Cow position: chr1:55184974-55184831 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 51-188
Cow position: chr1:36613899-36614040 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 52-170
Cow position: chr1:23674278-23674401 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 52-186
Cow position: chr1:71782478-71782615 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 37, 119

Conread position: 52-188
Cow position: chr1:58825727-58825590 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 66

Conread position: 52-188
Cow position: chr1:88910713-88910852 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 52-188
Cow position: chr1:90390188-90390333 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 53-170
Cow position: chr1:4945129-4945247 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 71

Conread position: 53-186
Cow position: chr1:64624638-64624776 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 34, 74

Conread position: 53-188
Cow position: chr1:46006018-46006156 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 53-188
Cow position: chr1:69415519-69415660 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 107

Conread position: 53-188
Cow position: chr1:70416319-70416179 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 82

Conread position: 53-188
Cow position: chr1:74946929-74947068 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 84

Conread position: 54-182
Cow position: chr1:19416690-19416823 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 113
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 54-182
Cow position: chr1:72073533-72073403 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 54-188
Cow position: chr1:15902685-15902543 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 54-188
Cow position: chr1:41735440-41735570 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 29

Conread position: 54-188
Cow position: chr1:54289001-54289143 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 54-188
Cow position: chr1:70533753-70533889 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 17

Conread position: 54-188
Cow position: chr1:82371125-82370997 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 116, 41

Conread position: 55-184
Cow position: chr1:18414281-18414413 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 30, 119

Conread position: 55-186
Cow position: chr1:61737285-61737147 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 55-188
Cow position: chr1:15314728-15314868 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 36, 76

Conread position: 55-188
Cow position: chr1:31390403-31390539 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 55-188
Cow position: chr1:45925230-45925089 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 27, 115

Conread position: 55-211
Cow position: chr1:52414775-52414935 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 30, 89

Conread position: 56-188
Cow position: chr1:7657131-7657264 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 34

Conread position: 56-188
Cow position: chr1:26688284-26688422 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 127

Conread position: 60-188
Cow position: chr1:23100085-23099952 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 93

Conread position: 60-188
Cow position: chr1:29975428-29975550 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 62-188
Cow position: chr1:72732218-72732090 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 79

Conread position: 62-188
Cow position: chr1:80384581-80384714 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 63-184
Cow position: chr1:17171218-17171339 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 60

Conread position: 63-186
Cow position: chr1:49346223-49346095 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 63-188
Cow position: chr1:79215687-79215820 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 69-188
Cow position: chr1:54125051-54125175 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 76-186
Cow position: chr1:44685296-44685187 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 76-196
Cow position: chr1:23330400-23330526 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 77-188
Cow position: chr1:71136317-71136202 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 50

Conread position: 79-188
Cow position: chr1:95764933-95765043 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 94
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 29, 67

Conread position: 84-188
Cow position: chr1:25793284-25793390 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 56

Conread position: 84-188
Cow position: chr1:26531426-26531534 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 93
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 84-188
Cow position: chr1:33921125-33921231 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 93
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 84-188
Cow position: chr1:85141580-85141686 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 40

Conread position: 84-188
Cow position: chr1:97603484-97603589 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 25, 40

Conread position: 85-188
Cow position: chr1:80764381-80764486 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 86-188
Cow position: chr1:18283635-18283531 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 87-184
Cow position: chr1:29338067-29337968 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 85
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 89-188
Cow position: chr1:75347775-75347674 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 0

Show alignments to all cow chromosomes.