Cow genome map
| Conread name: | rmed34c_a10.y1 |
| Conread position: | 34-188 |
| Cow position: | chr13:47188222-47188378 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 15, 92 |
| Conread position: | 35-188 |
| Cow position: | chr13:23048026-23047867 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 41-188 |
| Cow position: | chr13:20466495-20466343 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 42-188 |
| Cow position: | chr13:7010265-7010413 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 21 |
| Conread position: | 43-188 |
| Cow position: | chr13:32773152-32773295 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 81 |
| Conread position: | 46-187 |
| Cow position: | chr13:34664922-34665072 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 46-188 |
| Cow position: | chr13:56270448-56270295 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 46-188 |
| Cow position: | chr13:56281024-56281177 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 46-210 |
| Cow position: | chr13:33975226-33975392 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 14 |
| Conread position: | 47-182 |
| Cow position: | chr13:57341497-57341356 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 39, 123 |
| Conread position: | 47-189 |
| Cow position: | chr13:21403608-21403467 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 61, 37 |
| Conread position: | 48-182 |
| Cow position: | chr13:6621796-6621656 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 136 |
| Conread position: | 48-186 |
| Cow position: | chr13:17991453-17991598 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 48-188 |
| Cow position: | chr13:9083204-9083068 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 48-188 |
| Cow position: | chr13:11768250-11768102 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 48-188 |
| Cow position: | chr13:11794246-11794382 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 48-188 |
| Cow position: | chr13:25206912-25207055 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 48-188 |
| Cow position: | chr13:26507737-26507876 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 48-188 |
| Cow position: | chr13:30271119-30271264 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 48-188 |
| Cow position: | chr13:33281804-33281947 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 48-210 |
| Cow position: | chr13:1958801-1958974 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 49-186 |
| Cow position: | chr13:29820411-29820267 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 49-188 |
| Cow position: | chr13:9802862-9803009 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 50-188 |
| Cow position: | chr13:15091111-15090969 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 129 |
| Conread position: | 50-188 |
| Cow position: | chr13:22887193-22887048 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 52-180 |
| Cow position: | chr13:19239219-19239354 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 77 |
| Conread position: | 52-184 |
| Cow position: | chr13:18665537-18665677 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 52-187 |
| Cow position: | chr13:12521980-12521838 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 52-188 |
| Cow position: | chr13:10753886-10754023 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 88 |
| Conread position: | 52-188 |
| Cow position: | chr13:12233655-12233512 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 52-188 |
| Cow position: | chr13:22075469-22075612 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 53-185 |
| Cow position: | chr13:25824319-25824455 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 38, 89 |
| Conread position: | 53-187 |
| Cow position: | chr13:43156056-43155915 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 53-188 |
| Cow position: | chr13:10932355-10932492 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 81 |
| Conread position: | 53-188 |
| Cow position: | chr13:34995530-34995387 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 54-187 |
| Cow position: | chr13:49200441-49200577 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 54-188 |
| Cow position: | chr13:50824015-50823874 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 54-191 |
| Cow position: | chr13:22021377-22021523 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 55-188 |
| Cow position: | chr13:8822671-8822804 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 36, 58 |
| Conread position: | 55-188 |
| Cow position: | chr13:32657184-32657321 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 28 |
| Conread position: | 60-188 |
| Cow position: | chr13:32904586-32904720 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 78-188 |
| Cow position: | chr13:11834648-11834537 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 80-185 |
| Cow position: | chr13:34689763-34689870 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 84-188 |
| Cow position: | chr13:32167475-32167370 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 22, 53 |
| Conread position: | 84-192 |
| Cow position: | chr13:21725981-21726092 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 87-188 |
| Cow position: | chr13:11171076-11171177 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 89-188 |
| Cow position: | chr13:26508324-26508425 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 108-311 |
| Cow position: | chr13:46394428-46394635 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 155, 88 |
Show alignments to all cow chromosomes.