Cow genome map
| Conread name: | rmed34c_a10.y1 |
| Conread position: | 35-185 |
| Cow position: | chr17:7614132-7614289 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 9, 141 |
| Conread position: | 44-188 |
| Cow position: | chr17:36818271-36818124 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 86 |
| Conread position: | 46-188 |
| Cow position: | chr17:27781288-27781150 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 13, 28 |
| Conread position: | 47-187 |
| Cow position: | chr17:36400328-36400187 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 48-180 |
| Cow position: | chr17:10314651-10314513 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 48-182 |
| Cow position: | chr17:11655610-11655467 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 48-186 |
| Cow position: | chr17:3619856-3620000 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 35, 81 |
| Conread position: | 48-188 |
| Cow position: | chr17:8215418-8215276 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 77 |
| Conread position: | 48-188 |
| Cow position: | chr17:10769279-10769427 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 48-188 |
| Cow position: | chr17:27819524-27819379 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 49-186 |
| Cow position: | chr17:35387771-35387915 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 49-188 |
| Cow position: | chr17:1525597-1525739 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 49-188 |
| Cow position: | chr17:34784513-34784373 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 91 |
| Conread position: | 50-179 |
| Cow position: | chr17:8279486-8279614 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 57, 98 |
| Conread position: | 50-188 |
| Cow position: | chr17:32457342-32457485 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 52-188 |
| Cow position: | chr17:2271223-2271084 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 37, 68 |
| Conread position: | 52-188 |
| Cow position: | chr17:8094068-8093931 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 52-188 |
| Cow position: | chr17:30236421-30236280 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 106 |
| Conread position: | 52-188 |
| Cow position: | chr17:31798222-31798364 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 125 |
| Conread position: | 53-187 |
| Cow position: | chr17:27505322-27505181 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 76 |
| Conread position: | 54-187 |
| Cow position: | chr17:21730072-21730213 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 54-188 |
| Cow position: | chr17:10271708-10271575 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 37 |
| Conread position: | 55-186 |
| Cow position: | chr17:2182373-2182244 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 20 |
| Conread position: | 55-188 |
| Cow position: | chr17:36173743-36173889 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 56-186 |
| Cow position: | chr17:728138-728267 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 108 |
| Conread position: | 56-188 |
| Cow position: | chr17:143957-144095 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 134 |
| Conread position: | 56-188 |
| Cow position: | chr17:13229600-13229462 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 34, 104 |
| Conread position: | 61-188 |
| Cow position: | chr17:24880958-24880824 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 69-188 |
| Cow position: | chr17:7595353-7595234 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 79-188 |
| Cow position: | chr17:9748939-9748827 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 84-185 |
| Cow position: | chr17:5041216-5041320 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 84-187 |
| Cow position: | chr17:1328787-1328683 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 25, 11 |
| Conread position: | 84-197 |
| Cow position: | chr17:5381141-5381026 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 86-188 |
| Cow position: | chr17:19891812-19891708 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 38 |
| Conread position: | 89-258 |
| Cow position: | chr17:23879341-23879511 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 125 |
Show alignments to all cow chromosomes.