Cow genome map
| Conread name: | rmed34c_a10.y1 |
| Conread position: | 43-213 |
| Cow position: | chr18:23652257-23652430 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 46-186 |
| Cow position: | chr18:16448698-16448556 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 46-186 |
| Cow position: | chr18:22411453-22411599 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 47-188 |
| Cow position: | chr18:15831445-15831586 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 48-187 |
| Cow position: | chr18:30566412-30566548 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 60, 27 |
| Conread position: | 48-188 |
| Cow position: | chr18:26373079-26372931 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 48-188 |
| Cow position: | chr18:45961114-45961261 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 48-188 |
| Cow position: | chr18:55696870-55697013 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 48-204 |
| Cow position: | chr18:14520189-14520029 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 49-180 |
| Cow position: | chr18:51271589-51271730 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 49-187 |
| Cow position: | chr18:20126951-20127094 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 49-188 |
| Cow position: | chr18:29949899-29949760 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 49-189 |
| Cow position: | chr18:6158065-6157923 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 50-174 |
| Cow position: | chr18:16841896-16842027 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 51-186 |
| Cow position: | chr18:44493331-44493473 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 52-188 |
| Cow position: | chr18:38126296-38126437 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 100 |
| Conread position: | 52-188 |
| Cow position: | chr18:48717792-48717926 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 56, 76 |
| Conread position: | 53-166 |
| Cow position: | chr18:15267837-15267957 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 53-187 |
| Cow position: | chr18:50700837-50700699 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 38, 104 |
| Conread position: | 53-188 |
| Cow position: | chr18:21706038-21706173 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 54-188 |
| Cow position: | chr18:28794987-28794848 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 55-188 |
| Cow position: | chr18:7409153-7409291 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 55-188 |
| Cow position: | chr18:39503550-39503686 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 98 |
| Conread position: | 55-188 |
| Cow position: | chr18:48458821-48458685 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 57-209 |
| Cow position: | chr18:2438618-2438776 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 58-188 |
| Cow position: | chr18:51298627-51298491 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 101 |
| Conread position: | 73-188 |
| Cow position: | chr18:39210886-39211003 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 76-188 |
| Cow position: | chr18:44408540-44408429 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 78-187 |
| Cow position: | chr18:16726771-16726660 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 84-203 |
| Cow position: | chr18:16298222-16298101 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 95-209 |
| Cow position: | chr18:23425024-23424909 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 96 |
Show alignments to all cow chromosomes.