Cow genome map
| Conread name: | rmed34c_a10.y1 |
| Conread position: | 28-188 |
| Cow position: | chr21:31662271-31662111 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 80, 10 |
| Conread position: | 30-171 |
| Cow position: | chr21:22053316-22053180 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 74, 18 |
| Conread position: | 40-188 |
| Cow position: | chr21:2413309-2413160 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 43-179 |
| Cow position: | chr21:38628337-38628198 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 43-188 |
| Cow position: | chr21:23800874-23801021 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 65, 81 |
| Conread position: | 46-188 |
| Cow position: | chr21:33946999-33947146 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 47-181 |
| Cow position: | chr21:7483100-7483234 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 34, 63 |
| Conread position: | 47-186 |
| Cow position: | chr21:11675798-11675944 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 47-188 |
| Cow position: | chr21:4099122-4098976 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 47-188 |
| Cow position: | chr21:31576742-31576599 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 47-188 |
| Cow position: | chr21:37120957-37121104 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 47, 88 |
| Conread position: | 48-175 |
| Cow position: | chr21:36469908-36469778 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 41, 94 |
| Conread position: | 48-185 |
| Cow position: | chr21:2458398-2458533 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 11, 59 |
| Conread position: | 48-188 |
| Cow position: | chr21:34049322-34049470 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 52-188 |
| Cow position: | chr21:13358579-13358436 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 52-188 |
| Cow position: | chr21:15741833-15741978 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 52-188 |
| Cow position: | chr21:17428746-17428603 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 111 |
| Conread position: | 52-188 |
| Cow position: | chr21:17806889-17807030 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 52-188 |
| Cow position: | chr21:23974026-23974168 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 38, 77 |
| Conread position: | 52-188 |
| Cow position: | chr21:45356084-45355940 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 53-188 |
| Cow position: | chr21:22398397-22398269 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 53-188 |
| Cow position: | chr21:23768113-23767978 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 53-188 |
| Cow position: | chr21:23786274-23786139 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 24 |
| Conread position: | 53-188 |
| Cow position: | chr21:25800644-25800507 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 54-188 |
| Cow position: | chr21:22352989-22353130 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 105 |
| Conread position: | 54-188 |
| Cow position: | chr21:44220613-44220470 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 55-188 |
| Cow position: | chr21:26147325-26147184 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 55-188 |
| Cow position: | chr21:26753732-26753598 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 8, 26 |
| Conread position: | 55-188 |
| Cow position: | chr21:49661593-49661728 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 70 |
| Conread position: | 56-184 |
| Cow position: | chr21:41197806-41197934 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 31, 69 |
| Conread position: | 60-186 |
| Cow position: | chr21:13417997-13418125 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 60-189 |
| Cow position: | chr21:34564977-34565107 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 124 |
| Conread position: | 62-186 |
| Cow position: | chr21:4276363-4276493 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 97 |
| Conread position: | 62-217 |
| Cow position: | chr21:23397425-23397588 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 83-188 |
| Cow position: | chr21:36371697-36371591 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 84-188 |
| Cow position: | chr21:35997385-35997279 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.