Cow genome map
| Conread name: | rmed34c_a10.y1 |
| Conread position: | 20-188 |
| Cow position: | chr24:44929545-44929368 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 38-186 |
| Cow position: | chr24:27054582-27054432 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 38-188 |
| Cow position: | chr24:31378927-31378771 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 19, 92 |
| Conread position: | 41-187 |
| Cow position: | chr24:10546237-10546090 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 70, 40 |
| Conread position: | 43-177 |
| Cow position: | chr24:16315667-16315531 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 46-188 |
| Cow position: | chr24:32158105-32158257 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 48-188 |
| Cow position: | chr24:2143916-2143769 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 10, 112 |
| Conread position: | 48-188 |
| Cow position: | chr24:42916223-42916362 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 48-188 |
| Cow position: | chr24:42942953-42943100 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 101 |
| Conread position: | 49-188 |
| Cow position: | chr24:39350060-39350197 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 51-180 |
| Cow position: | chr24:15617312-15617447 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 52-182 |
| Cow position: | chr24:40809205-40809339 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 35, 83 |
| Conread position: | 52-188 |
| Cow position: | chr24:7079945-7079803 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 31, 62 |
| Conread position: | 53-188 |
| Cow position: | chr24:39742972-39742834 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 53-209 |
| Cow position: | chr24:22939848-22939688 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 13 |
| Conread position: | 54-182 |
| Cow position: | chr24:6246228-6246364 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 54-188 |
| Cow position: | chr24:23824273-23824403 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 113, 37 |
| Conread position: | 54-188 |
| Cow position: | chr24:41332423-41332564 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 55-185 |
| Cow position: | chr24:38292014-38291882 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 55-186 |
| Cow position: | chr24:31258181-31258317 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 55-188 |
| Cow position: | chr24:15909780-15909639 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 55-189 |
| Cow position: | chr24:6427862-6427723 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 56-187 |
| Cow position: | chr24:44074301-44074435 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 57 |
| Conread position: | 56-188 |
| Cow position: | chr24:28279781-28279644 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 57-188 |
| Cow position: | chr24:34368850-34368987 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 72 |
| Conread position: | 76-175 |
| Cow position: | chr24:23684753-23684855 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 84-182 |
| Cow position: | chr24:25678149-25678048 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 84-188 |
| Cow position: | chr24:16055386-16055492 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 84-188 |
| Cow position: | chr24:36497611-36497716 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 24, 100 |
| Conread position: | 95-241 |
| Cow position: | chr24:39474289-39474441 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 29 |
Show alignments to all cow chromosomes.