Cow genome map
| Conread name: | rmed34c_a10.y1 |
| Conread position: | 38-186 |
| Cow position: | chr6:2323985-2324138 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 38-186 |
| Cow position: | chr6:17232218-17232364 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 14 |
| Conread position: | 40-189 |
| Cow position: | chr6:7707372-7707215 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 43-186 |
| Cow position: | chr6:48806779-48806924 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 65, 20 |
| Conread position: | 45-188 |
| Cow position: | chr6:56376120-56376265 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 18 |
| Conread position: | 46-179 |
| Cow position: | chr6:51351940-51351808 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 46-186 |
| Cow position: | chr6:4740927-4740789 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 117, 62 |
| Conread position: | 46-186 |
| Cow position: | chr6:15996990-15997132 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 47, 16 |
| Conread position: | 46-188 |
| Cow position: | chr6:47192293-47192441 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 96 |
| Conread position: | 47-188 |
| Cow position: | chr6:25224467-25224322 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 18 |
| Conread position: | 47-188 |
| Cow position: | chr6:28278903-28278760 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 81 |
| Conread position: | 47-188 |
| Cow position: | chr6:47624653-47624798 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 9, 80 |
| Conread position: | 47-188 |
| Cow position: | chr6:62379930-62379788 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 108 |
| Conread position: | 48-186 |
| Cow position: | chr6:31425329-31425473 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 48-188 |
| Cow position: | chr6:6596797-6596655 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 48-188 |
| Cow position: | chr6:59496443-59496303 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 43, 23 |
| Conread position: | 49-180 |
| Cow position: | chr6:4023331-4023193 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 49-188 |
| Cow position: | chr6:30160547-30160402 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 31, 80 |
| Conread position: | 50-188 |
| Cow position: | chr6:7836130-7835998 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 50-188 |
| Cow position: | chr6:13718993-13718847 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 50-188 |
| Cow position: | chr6:24545842-24545697 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 51-188 |
| Cow position: | chr6:1732568-1732423 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 52-188 |
| Cow position: | chr6:6161823-6161687 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 100 |
| Conread position: | 52-188 |
| Cow position: | chr6:50034508-50034643 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 56, 96 |
| Conread position: | 52-188 |
| Cow position: | chr6:53939190-53939047 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 52-399 |
| Cow position: | chr6:22863041-22863386 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 110 |
| Conread position: | 53-186 |
| Cow position: | chr6:37612331-37612191 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 53-209 |
| Cow position: | chr6:23986240-23986402 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 54-187 |
| Cow position: | chr6:48572659-48572796 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 12 |
| Conread position: | 54-188 |
| Cow position: | chr6:19427670-19427534 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 54-188 |
| Cow position: | chr6:20255182-20255327 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 54-188 |
| Cow position: | chr6:41042141-41042003 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 73 |
| Conread position: | 55-187 |
| Cow position: | chr6:9026737-9026604 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 56 |
| Conread position: | 55-188 |
| Cow position: | chr6:32412418-32412555 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 123 |
| Conread position: | 57-188 |
| Cow position: | chr6:53674082-53673947 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 76-188 |
| Cow position: | chr6:15754043-15753927 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 51 |
| Conread position: | 80-188 |
| Cow position: | chr6:15782321-15782431 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 81-186 |
| Cow position: | chr6:24558070-24557964 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 81-207 |
| Cow position: | chr6:64313971-64314099 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 83-188 |
| Cow position: | chr6:64427415-64427308 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 84-188 |
| Cow position: | chr6:1907709-1907603 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 84-203 |
| Cow position: | chr6:29649295-29649174 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.