Cow genome map
| Conread name: | rmed34c_a10.y1 |
| Conread position: | 35-188 |
| Cow position: | chr8:24547229-24547070 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 28 |
| Conread position: | 37-186 |
| Cow position: | chr8:32827467-32827617 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 72 |
| Conread position: | 42-188 |
| Cow position: | chr8:39967604-39967753 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 48, 29 |
| Conread position: | 43-188 |
| Cow position: | chr8:39017912-39017759 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 44-188 |
| Cow position: | chr8:29414095-29413946 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 44-209 |
| Cow position: | chr8:20892534-20892363 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 13, 42 |
| Conread position: | 46-186 |
| Cow position: | chr8:6468965-6469110 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 44, 19 |
| Conread position: | 46-186 |
| Cow position: | chr8:21282260-21282114 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 46, 111 |
| Conread position: | 47-188 |
| Cow position: | chr8:20682598-20682448 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 48-188 |
| Cow position: | chr8:9528223-9528366 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 48-188 |
| Cow position: | chr8:45163224-45163078 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 11, 81 |
| Conread position: | 48-188 |
| Cow position: | chr8:51959207-51959354 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 48-188 |
| Cow position: | chr8:55305283-55305135 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 48-188 |
| Cow position: | chr8:60949546-60949689 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 49-187 |
| Cow position: | chr8:23030830-23030687 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 49-188 |
| Cow position: | chr8:15686201-15686349 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 49-188 |
| Cow position: | chr8:35218566-35218420 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 49-197 |
| Cow position: | chr8:36274131-36274287 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 50-188 |
| Cow position: | chr8:53866300-53866154 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 52-177 |
| Cow position: | chr8:37007624-37007751 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 52-187 |
| Cow position: | chr8:19171422-19171558 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 56, 72 |
| Conread position: | 52-188 |
| Cow position: | chr8:28221371-28221512 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 52-209 |
| Cow position: | chr8:27294924-27294759 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 53-187 |
| Cow position: | chr8:36471736-36471596 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 95 |
| Conread position: | 53-187 |
| Cow position: | chr8:46640146-46640281 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 87 |
| Conread position: | 53-188 |
| Cow position: | chr8:26229143-26229010 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 114, 50 |
| Conread position: | 54-183 |
| Cow position: | chr8:59506886-59507018 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 54-187 |
| Cow position: | chr8:49599736-49599870 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 54, 17 |
| Conread position: | 54-187 |
| Cow position: | chr8:54070938-54070807 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 64 |
| Conread position: | 55-174 |
| Cow position: | chr8:21137088-21137209 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 55-185 |
| Cow position: | chr8:37487103-37487240 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 55-188 |
| Cow position: | chr8:11249289-11249426 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 55-188 |
| Cow position: | chr8:13810397-13810259 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 55-188 |
| Cow position: | chr8:51904844-51904984 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 36, 79 |
| Conread position: | 56-187 |
| Cow position: | chr8:46203459-46203321 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 56-188 |
| Cow position: | chr8:11896392-11896258 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 56-188 |
| Cow position: | chr8:13900593-13900452 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 56-188 |
| Cow position: | chr8:49265109-49265248 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 62-188 |
| Cow position: | chr8:27053418-27053546 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 118 |
| Conread position: | 62-188 |
| Cow position: | chr8:49510719-49510839 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 71-188 |
| Cow position: | chr8:26922799-26922678 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 50 |
| Conread position: | 76-180 |
| Cow position: | chr8:50266458-50266350 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 76-186 |
| Cow position: | chr8:18367918-18368028 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 76-187 |
| Cow position: | chr8:32983933-32984047 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 76-187 |
| Cow position: | chr8:55829175-55829291 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 97 |
| Conread position: | 78-188 |
| Cow position: | chr8:1107024-1107135 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 80-188 |
| Cow position: | chr8:20832159-20832270 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 84-188 |
| Cow position: | chr8:36505535-36505430 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 24, 46 |
| Conread position: | 85-188 |
| Cow position: | chr8:33510460-33510568 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 86-188 |
| Cow position: | chr8:13976048-13975945 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 23, 38 |
| Conread position: | 89-188 |
| Cow position: | chr8:22653452-22653352 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
Show alignments to all cow chromosomes.