Cow genome map
| Conread name: | rmed34c_a10.y1 |
| Conread position: | 36-188 |
| Cow position: | chr9:47925756-47925910 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 72, 33 |
| Conread position: | 47-188 |
| Cow position: | chr9:20200140-20200279 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 44, 16 |
| Conread position: | 48-187 |
| Cow position: | chr9:12498848-12498995 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 48-188 |
| Cow position: | chr9:9315150-9315293 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 48-188 |
| Cow position: | chr9:18111022-18110880 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 48-188 |
| Cow position: | chr9:28983020-28983169 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 48-188 |
| Cow position: | chr9:29808294-29808440 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 29 |
| Conread position: | 48-188 |
| Cow position: | chr9:33668563-33668715 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 48-188 |
| Cow position: | chr9:43911773-43911913 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 50-176 |
| Cow position: | chr9:3845358-3845233 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 50-188 |
| Cow position: | chr9:33059431-33059286 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 50-188 |
| Cow position: | chr9:35277924-35278062 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 39 |
| Conread position: | 52-186 |
| Cow position: | chr9:43037325-43037466 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 52-187 |
| Cow position: | chr9:3958917-3959051 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 53-187 |
| Cow position: | chr9:35708775-35708634 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 53-189 |
| Cow position: | chr9:42173340-42173199 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 54-186 |
| Cow position: | chr9:30019828-30019963 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 67 |
| Conread position: | 54-186 |
| Cow position: | chr9:42900746-42900881 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 55-183 |
| Cow position: | chr9:7655304-7655168 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 55-187 |
| Cow position: | chr9:34203975-34204114 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 56-188 |
| Cow position: | chr9:17110620-17110759 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 56-188 |
| Cow position: | chr9:26645767-26645906 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 104 |
| Conread position: | 57-188 |
| Cow position: | chr9:8617678-8617801 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 57-188 |
| Cow position: | chr9:39428952-39428814 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 61-188 |
| Cow position: | chr9:2863299-2863429 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 62-188 |
| Cow position: | chr9:3169665-3169537 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 45, 62 |
| Conread position: | 64-188 |
| Cow position: | chr9:15684932-15684802 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 100 |
| Conread position: | 80-188 |
| Cow position: | chr9:53794652-53794543 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 92 |
| Conread position: | 84-188 |
| Cow position: | chr9:34309908-34310014 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 84-209 |
| Cow position: | chr9:5059435-5059310 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 28, 101 |
| Conread position: | 85-188 |
| Cow position: | chr9:21537148-21537253 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
Show alignments to all cow chromosomes.