Cow genome map
| Conread name: | rmga09_j8.y1 |
| Conread position: | 1-298 |
| Cow position: | chr1:88307379-88307658 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 1-299 |
| Cow position: | chr1:14528345-14528637 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 237 |
| Conread position: | 1-307 |
| Cow position: | chr1:1743438-1743738 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 58, 49 |
| Conread position: | 1-307 |
| Cow position: | chr1:6795079-6795386 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 103 |
| Conread position: | 1-307 |
| Cow position: | chr1:25781658-25781351 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 97, 64 |
| Conread position: | 1-307 |
| Cow position: | chr1:26810945-26811251 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 115, 37 |
| Conread position: | 1-307 |
| Cow position: | chr1:31190257-31190540 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 117, 10 |
| Conread position: | 1-307 |
| Cow position: | chr1:40530390-40530670 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1-307 |
| Cow position: | chr1:60120283-60119987 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 100, 92 |
| Conread position: | 1-307 |
| Cow position: | chr1:61341307-61341611 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 78, 46 |
| Conread position: | 1-307 |
| Cow position: | chr1:71676042-71676340 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 110, 101 |
| Conread position: | 1-307 |
| Cow position: | chr1:90298018-90297724 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 217, 121 |
| Conread position: | 1-332 |
| Cow position: | chr1:101551312-101550989 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 232 |
| Conread position: | 2-296 |
| Cow position: | chr1:23624018-23623721 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 84, 104 |
| Conread position: | 3-307 |
| Cow position: | chr1:37309658-37309953 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 141, 71 |
| Conread position: | 3-307 |
| Cow position: | chr1:38382023-38382317 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 77 |
| Conread position: | 3-321 |
| Cow position: | chr1:31274451-31274766 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 83, 237 |
| Conread position: | 3-324 |
| Cow position: | chr1:46218434-46218124 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 115, 13 |
| Conread position: | 4-295 |
| Cow position: | chr1:20099215-20098930 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 122 |
| Conread position: | 11-263 |
| Cow position: | chr1:559196-559450 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 98, 134 |
| Conread position: | 11-304 |
| Cow position: | chr1:101786876-101787161 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 114, 33 |
| Conread position: | 11-307 |
| Cow position: | chr1:99627970-99628260 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 82, 227 |
| Conread position: | 12-320 |
| Cow position: | chr1:27944116-27943834 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 13-310 |
| Cow position: | chr1:31815271-31814985 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 89, 130 |
| Conread position: | 25-304 |
| Cow position: | chr1:22227688-22227426 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 139, 81 |
| Conread position: | 35-307 |
| Cow position: | chr1:2994894-2994620 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 83, 51 |
| Conread position: | 35-307 |
| Cow position: | chr1:2997644-2997370 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 83, 51 |
| Conread position: | 74-304 |
| Cow position: | chr1:89548001-89547774 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 161, 77 |
| Conread position: | 98-304 |
| Cow position: | chr1:70534206-70534402 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 109-307 |
| Cow position: | chr1:44975490-44975304 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 109-321 |
| Cow position: | chr1:22909906-22909704 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 74, 125 |
| Conread position: | 112-304 |
| Cow position: | chr1:77657545-77657362 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 112-307 |
| Cow position: | chr1:73196847-73197038 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 116-307 |
| Cow position: | chr1:79255994-79255816 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 56, 78 |
| Conread position: | 117-307 |
| Cow position: | chr1:71818764-71818943 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 119-307 |
| Cow position: | chr1:75967150-75966973 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 120-307 |
| Cow position: | chr1:22388503-22388674 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 11, 32 |
Show alignments to all cow chromosomes.