Cow genome map
| Conread name: | rmga09_j8.y1 |
| Conread position: | 1-299 |
| Cow position: | chr10:20478711-20478412 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 94, 242 |
| Conread position: | 1-299 |
| Cow position: | chr10:46801180-46801465 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 89, 93 |
| Conread position: | 1-304 |
| Cow position: | chr10:38155283-38154995 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 72, 103 |
| Conread position: | 1-304 |
| Cow position: | chr10:63091137-63090842 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 114, 128 |
| Conread position: | 1-307 |
| Cow position: | chr10:13311556-13311261 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 119, 101 |
| Conread position: | 1-307 |
| Cow position: | chr10:20517087-20516782 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 84, 123 |
| Conread position: | 1-307 |
| Cow position: | chr10:39257908-39257611 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 32, 57 |
| Conread position: | 1-307 |
| Cow position: | chr10:39438495-39438786 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 117, 101 |
| Conread position: | 1-308 |
| Cow position: | chr10:39387280-39386986 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 224 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 72, 22 |
| Conread position: | 1-310 |
| Cow position: | chr10:7231197-7231492 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 1-320 |
| Cow position: | chr10:68979399-68979075 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 205 |
| Conread position: | 2-304 |
| Cow position: | chr10:25370145-25369857 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 106, 75 |
| Conread position: | 2-307 |
| Cow position: | chr10:18389315-18389615 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 100, 214 |
| Conread position: | 3-288 |
| Cow position: | chr10:2394641-2394914 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 85 |
| Conread position: | 3-296 |
| Cow position: | chr10:35911923-35912214 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 115, 77 |
| Conread position: | 3-299 |
| Cow position: | chr10:38518809-38519099 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 97, 74 |
| Conread position: | 3-307 |
| Cow position: | chr10:7328553-7328250 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 224 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 54, 237 |
| Conread position: | 3-307 |
| Cow position: | chr10:20367085-20367367 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 123, 32 |
| Conread position: | 3-307 |
| Cow position: | chr10:39777662-39777956 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 105, 46 |
| Conread position: | 5-307 |
| Cow position: | chr10:28671002-28671300 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 70 |
| Conread position: | 7-307 |
| Cow position: | chr10:37311319-37311604 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 171 |
| Conread position: | 7-307 |
| Cow position: | chr10:58607924-58607631 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 85, 115 |
| Conread position: | 11-307 |
| Cow position: | chr10:32583730-32583445 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 106, 91 |
| Conread position: | 11-307 |
| Cow position: | chr10:65345637-65345926 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 97, 43 |
| Conread position: | 11-323 |
| Cow position: | chr10:46377949-46378248 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 14-304 |
| Cow position: | chr10:19718766-19719051 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 88, 108 |
| Conread position: | 15-307 |
| Cow position: | chr10:30718556-30718275 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 87, 71 |
| Conread position: | 15-307 |
| Cow position: | chr10:53057851-53058144 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 71, 121 |
| Conread position: | 17-307 |
| Cow position: | chr10:48741349-48741634 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 54, 61 |
| Conread position: | 18-308 |
| Cow position: | chr10:51427763-51427484 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 82, 23 |
| Conread position: | 27-304 |
| Cow position: | chr10:16650121-16650406 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 55, 225 |
| Conread position: | 35-299 |
| Cow position: | chr10:24292529-24292785 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 50, 79 |
| Conread position: | 76-307 |
| Cow position: | chr10:21902771-21903004 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 79 |
| Conread position: | 107-307 |
| Cow position: | chr10:64286107-64286295 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 109-348 |
| Cow position: | chr10:30450385-30450615 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 9, 126 |
| Conread position: | 110-307 |
| Cow position: | chr10:6567925-6567732 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 58, 12 |
| Conread position: | 111-307 |
| Cow position: | chr10:32834050-32833867 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 117-304 |
| Cow position: | chr10:36247525-36247339 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 126-307 |
| Cow position: | chr10:28039539-28039722 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 162-304 |
| Cow position: | chr10:25293427-25293284 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 54, 0 |
Show alignments to all cow chromosomes.