Cow genome map
| Conread name: | rmga09_j8.y1 |
| Conread position: | 1-299 |
| Cow position: | chr16:6389029-6389331 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 88, 234 |
| Conread position: | 1-303 |
| Cow position: | chr16:13885959-13885663 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 1-304 |
| Cow position: | chr16:18051938-18051648 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 221 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 90, 37 |
| Conread position: | 1-304 |
| Cow position: | chr16:37442280-37442583 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 117, 229 |
| Conread position: | 1-305 |
| Cow position: | chr16:24926430-24926136 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 117, 85 |
| Conread position: | 1-307 |
| Cow position: | chr16:10998703-10998419 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 166, 31 |
| Conread position: | 1-307 |
| Cow position: | chr16:24446108-24445810 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 101, 86 |
| Conread position: | 1-307 |
| Cow position: | chr16:31973930-31974209 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 55 |
| Conread position: | 1-307 |
| Cow position: | chr16:46223113-46223425 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 1-307 |
| Cow position: | chr16:53267576-53267275 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 222 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 85, 239 |
| Conread position: | 1-314 |
| Cow position: | chr16:29655173-29654871 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 86, 64 |
| Conread position: | 1-324 |
| Cow position: | chr16:7427015-7427339 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 46, 122 |
| Conread position: | 2-302 |
| Cow position: | chr16:29322629-29322911 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 87 |
| Conread position: | 3-304 |
| Cow position: | chr16:32837702-32837981 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 3-307 |
| Cow position: | chr16:14028775-14029067 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 3-307 |
| Cow position: | chr16:28112075-28112364 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 3-307 |
| Cow position: | chr16:29205617-29205900 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 190, 25 |
| Conread position: | 3-307 |
| Cow position: | chr16:29967326-29967036 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 206 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 108, 36 |
| Conread position: | 5-307 |
| Cow position: | chr16:51043478-51043189 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 8, 89 |
| Conread position: | 11-304 |
| Cow position: | chr16:23673999-23673702 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 82, 202 |
| Conread position: | 11-304 |
| Cow position: | chr16:45654196-45654480 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 11-304 |
| Cow position: | chr16:54294853-54294561 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 227 |
| Conread position: | 11-321 |
| Cow position: | chr16:55308691-55308998 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 85, 220 |
| Conread position: | 11-328 |
| Cow position: | chr16:12546496-12546807 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 220 |
| Conread position: | 13-318 |
| Cow position: | chr16:26134508-26134793 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 224 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 71, 83 |
| Conread position: | 19-304 |
| Cow position: | chr16:1815099-1815370 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 19-309 |
| Cow position: | chr16:23066499-23066222 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 68, 181 |
| Conread position: | 69-304 |
| Cow position: | chr16:18949401-18949169 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 18, 30 |
| Conread position: | 95-307 |
| Cow position: | chr16:25043329-25043128 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 109-307 |
| Cow position: | chr16:13601345-13601532 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 112-307 |
| Cow position: | chr16:4192655-4192853 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 112-307 |
| Cow position: | chr16:50113431-50113246 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 112-307 |
| Cow position: | chr16:53086851-53087034 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 97, 70 |
| Conread position: | 117-307 |
| Cow position: | chr16:2308169-2307994 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 119-304 |
| Cow position: | chr16:11007990-11007816 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 0 |
Show alignments to all cow chromosomes.