Cow genome map
| Conread name: | rmga09_j8.y1 |
| Conread position: | 1-295 |
| Cow position: | chr17:25590347-25590620 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 72, 86 |
| Conread position: | 1-296 |
| Cow position: | chr17:34595829-34595546 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 7, 86 |
| Conread position: | 1-305 |
| Cow position: | chr17:21182437-21182137 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 1-307 |
| Cow position: | chr17:5747908-5748212 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 238 |
| Conread position: | 1-307 |
| Cow position: | chr17:10271380-10271081 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 259, 87 |
| Conread position: | 1-307 |
| Cow position: | chr17:12477807-12477510 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 111, 126 |
| Conread position: | 2-302 |
| Cow position: | chr17:30753162-30753455 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 106, 227 |
| Conread position: | 2-307 |
| Cow position: | chr17:3549274-3549578 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 100, 212 |
| Conread position: | 2-307 |
| Cow position: | chr17:16216045-16216323 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 3-307 |
| Cow position: | chr17:1456347-1456643 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 119, 235 |
| Conread position: | 3-307 |
| Cow position: | chr17:15187367-15187658 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 58 |
| Conread position: | 3-307 |
| Cow position: | chr17:18494629-18494929 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 176, 57 |
| Conread position: | 3-332 |
| Cow position: | chr17:15985237-15984928 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 97, 56 |
| Conread position: | 5-307 |
| Cow position: | chr17:8926335-8926638 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 239 |
| Conread position: | 7-304 |
| Cow position: | chr17:3042362-3042089 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 123, 91 |
| Conread position: | 8-304 |
| Cow position: | chr17:2270650-2270363 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 223 |
| Conread position: | 11-299 |
| Cow position: | chr17:35219449-35219729 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 60, 115 |
| Conread position: | 11-308 |
| Cow position: | chr17:35020810-35021088 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 158, 91 |
| Conread position: | 14-316 |
| Cow position: | chr17:38788352-38788653 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 112, 65 |
| Conread position: | 14-316 |
| Cow position: | chr17:38799593-38799895 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 112, 194 |
| Conread position: | 108-304 |
| Cow position: | chr17:39018-38832 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 109-304 |
| Cow position: | chr17:25340750-25340935 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 44, 36 |
| Conread position: | 110-294 |
| Cow position: | chr17:6848672-6848498 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 111-307 |
| Cow position: | chr17:13989457-13989643 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 112-307 |
| Cow position: | chr17:5144678-5144871 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 117-312 |
| Cow position: | chr17:38363487-38363673 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 99, 118 |
Show alignments to all cow chromosomes.