Cow genome map
| Conread name: | rmga09_j8.y1 |
| Conread position: | 1-299 |
| Cow position: | chr18:13497791-13498085 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 77, 95 |
| Conread position: | 1-299 |
| Cow position: | chr18:16163249-16163541 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 69, 88 |
| Conread position: | 1-299 |
| Cow position: | chr18:32908715-32908429 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 1-299 |
| Cow position: | chr18:51017265-51017557 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 1-304 |
| Cow position: | chr18:21106344-21106631 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 47, 86 |
| Conread position: | 1-305 |
| Cow position: | chr18:26242282-26242587 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 1-307 |
| Cow position: | chr18:11377177-11376889 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 1-307 |
| Cow position: | chr18:21682159-21682454 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 101, 15 |
| Conread position: | 1-307 |
| Cow position: | chr18:23630762-23631054 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 117, 39 |
| Conread position: | 1-307 |
| Cow position: | chr18:29013192-29013490 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 20 |
| Conread position: | 1-307 |
| Cow position: | chr18:40893108-40892776 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-307 |
| Cow position: | chr18:43564043-43563747 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 44, 56 |
| Conread position: | 1-307 |
| Cow position: | chr18:54031521-54031228 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 79, 50 |
| Conread position: | 2-307 |
| Cow position: | chr18:24711856-24712151 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 112, 100 |
| Conread position: | 2-307 |
| Cow position: | chr18:33371836-33372126 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 125, 51 |
| Conread position: | 5-307 |
| Cow position: | chr18:22874684-22874389 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 56 |
| Conread position: | 11-307 |
| Cow position: | chr18:9355463-9355743 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 11-307 |
| Cow position: | chr18:31997286-31997013 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 11-307 |
| Cow position: | chr18:42361053-42361338 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 96, 27 |
| Conread position: | 14-299 |
| Cow position: | chr18:13507929-13508211 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 105, 72 |
| Conread position: | 14-302 |
| Cow position: | chr18:52803653-52803379 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 22 |
| Conread position: | 14-307 |
| Cow position: | chr18:11867150-11866873 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 103, 54 |
| Conread position: | 15-299 |
| Cow position: | chr18:33057063-33056787 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 37-296 |
| Cow position: | chr18:55699394-55699639 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 81, 40 |
| Conread position: | 46-302 |
| Cow position: | chr18:13876958-13877206 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 72, 190 |
| Conread position: | 76-298 |
| Cow position: | chr18:42079917-42080140 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 163, 29 |
| Conread position: | 110-301 |
| Cow position: | chr18:38794295-38794485 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 137, 147 |
| Conread position: | 110-307 |
| Cow position: | chr18:36649432-36649246 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 110-309 |
| Cow position: | chr18:54027647-54027456 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 113-304 |
| Cow position: | chr18:10097865-10097685 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 113-307 |
| Cow position: | chr18:17334693-17334876 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 113-307 |
| Cow position: | chr18:31562889-31563074 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 116-307 |
| Cow position: | chr18:44048278-44048097 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 27, 32 |
| Conread position: | 117-300 |
| Cow position: | chr18:4765597-4765770 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 117-307 |
| Cow position: | chr18:23137514-23137692 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 118-304 |
| Cow position: | chr18:249179-249354 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 124-307 |
| Cow position: | chr18:10101154-10100977 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 86, 0 |
Show alignments to all cow chromosomes.