Cow genome map
| Conread name: | rmga09_j8.y1 |
| Conread position: | 1-304 |
| Cow position: | chr4:2121557-2121846 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 188, 20 |
| Conread position: | 1-304 |
| Cow position: | chr4:10613400-10613699 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 1-307 |
| Cow position: | chr4:33089904-33090204 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 111, 237 |
| Conread position: | 1-307 |
| Cow position: | chr4:46492733-46492439 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 95, 68 |
| Conread position: | 1-307 |
| Cow position: | chr4:58834565-58834856 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 1-307 |
| Cow position: | chr4:61271793-61272086 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 2-307 |
| Cow position: | chr4:13878032-13877742 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 85, 104 |
| Conread position: | 3-301 |
| Cow position: | chr4:50760281-50760567 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 26, 76 |
| Conread position: | 3-304 |
| Cow position: | chr4:15623682-15623388 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 35, 80 |
| Conread position: | 3-307 |
| Cow position: | chr4:6166491-6166790 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 115, 19 |
| Conread position: | 3-314 |
| Cow position: | chr4:37879282-37878968 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 98, 77 |
| Conread position: | 5-299 |
| Cow position: | chr4:17378981-17379265 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 229, 0 |
| Conread position: | 7-307 |
| Cow position: | chr4:28399573-28399854 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 107, 58 |
| Conread position: | 11-304 |
| Cow position: | chr4:54146644-54146945 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 89, 160 |
| Conread position: | 13-307 |
| Cow position: | chr4:24087511-24087228 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 106, 194 |
| Conread position: | 14-310 |
| Cow position: | chr4:23854033-23853745 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 14, 139 |
| Conread position: | 18-307 |
| Cow position: | chr4:48499670-48499373 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 70, 232 |
| Conread position: | 19-307 |
| Cow position: | chr4:42278408-42278700 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 60, 244 |
| Conread position: | 22-310 |
| Cow position: | chr4:65815872-65816152 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 96, 213 |
| Conread position: | 96-299 |
| Cow position: | chr4:24414995-24414804 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 109-307 |
| Cow position: | chr4:31174993-31174805 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 109-307 |
| Cow position: | chr4:36755454-36755266 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 109-324 |
| Cow position: | chr4:21364946-21364746 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 110-297 |
| Cow position: | chr4:48283565-48283388 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 57, 42 |
| Conread position: | 110-307 |
| Cow position: | chr4:22861186-22861374 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 9, 125 |
| Conread position: | 111-299 |
| Cow position: | chr4:46861847-46862025 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 112-307 |
| Cow position: | chr4:61624898-61625082 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 112-324 |
| Cow position: | chr4:58948224-58948423 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 117-299 |
| Cow position: | chr4:46083225-46083401 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 118-298 |
| Cow position: | chr4:51122723-51122548 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.