Cow genome map
| Conread name: | rmga09_j8.y1 |
| Conread position: | 1-299 |
| Cow position: | chr6:24623089-24623392 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 58, 193 |
| Conread position: | 1-302 |
| Cow position: | chr6:6341041-6340755 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 124, 101 |
| Conread position: | 1-304 |
| Cow position: | chr6:24631210-24631504 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 255, 64 |
| Conread position: | 1-307 |
| Cow position: | chr6:10612749-10612453 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 99, 23 |
| Conread position: | 1-307 |
| Cow position: | chr6:24327255-24327545 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 117, 23 |
| Conread position: | 1-307 |
| Cow position: | chr6:24583346-24583646 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 58, 95 |
| Conread position: | 1-307 |
| Cow position: | chr6:28811108-28811405 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 36 |
| Conread position: | 1-307 |
| Cow position: | chr6:47773324-47773627 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 143, 99 |
| Conread position: | 1-307 |
| Cow position: | chr6:50800515-50800821 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 234 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 43, 162 |
| Conread position: | 1-307 |
| Cow position: | chr6:58073932-58073633 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 25 |
| Conread position: | 1-307 |
| Cow position: | chr6:61443215-61443514 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 1-307 |
| Cow position: | chr6:65871785-65871508 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 2-307 |
| Cow position: | chr6:59508243-59507937 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 31, 136 |
| Conread position: | 3-299 |
| Cow position: | chr6:63197286-63197570 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 3-307 |
| Cow position: | chr6:15046208-15046498 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 115, 19 |
| Conread position: | 3-307 |
| Cow position: | chr6:16625833-16625537 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 109, 85 |
| Conread position: | 3-307 |
| Cow position: | chr6:44372057-44372352 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 90 |
| Conread position: | 3-307 |
| Cow position: | chr6:61162599-61162305 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 116, 99 |
| Conread position: | 11-298 |
| Cow position: | chr6:6839612-6839341 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 11-307 |
| Cow position: | chr6:47339470-47339767 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 224 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 60, 64 |
| Conread position: | 11-307 |
| Cow position: | chr6:50527533-50527249 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 13-307 |
| Cow position: | chr6:28504235-28503933 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 53, 183 |
| Conread position: | 13-310 |
| Cow position: | chr6:36652295-36652017 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 14-302 |
| Cow position: | chr6:48107905-48107627 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 63 |
| Conread position: | 14-307 |
| Cow position: | chr6:5866504-5866797 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 82, 223 |
| Conread position: | 14-307 |
| Cow position: | chr6:31635810-31636098 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 30, 54 |
| Conread position: | 19-299 |
| Cow position: | chr6:32121781-32121502 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 89, 191 |
| Conread position: | 26-307 |
| Cow position: | chr6:23986872-23987143 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 76, 60 |
| Conread position: | 39-307 |
| Cow position: | chr6:58370427-58370163 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 77, 59 |
| Conread position: | 73-307 |
| Cow position: | chr6:12648348-12648122 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 77 |
| Conread position: | 74-307 |
| Cow position: | chr6:28156302-28156527 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 162 |
| Conread position: | 109-304 |
| Cow position: | chr6:30826274-30826459 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 109-307 |
| Cow position: | chr6:45065254-45065443 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 117-307 |
| Cow position: | chr6:24557387-24557191 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 127, 50 |
| Conread position: | 118-307 |
| Cow position: | chr6:3118466-3118643 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 152-328 |
| Cow position: | chr6:15943959-15944127 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 157, 82 |
Show alignments to all cow chromosomes.