Cow genome map
| Conread name: | rmga09_j8.y1 |
| Conread position: | 1-294 |
| Cow position: | chr7:4418576-4418852 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 99, 107 |
| Conread position: | 1-299 |
| Cow position: | chr7:34554150-34553851 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 86, 55 |
| Conread position: | 1-299 |
| Cow position: | chr7:36746209-36745919 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 8 |
| Conread position: | 1-303 |
| Cow position: | chr7:3390613-3390323 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 85 |
| Conread position: | 1-303 |
| Cow position: | chr7:58301323-58301621 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 86, 195 |
| Conread position: | 1-304 |
| Cow position: | chr7:19051432-19051710 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 42, 89 |
| Conread position: | 1-304 |
| Cow position: | chr7:25685151-25685441 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 92, 52 |
| Conread position: | 1-304 |
| Cow position: | chr7:40916476-40916179 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 76 |
| Conread position: | 1-304 |
| Cow position: | chr7:56983519-56983814 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 107, 75 |
| Conread position: | 1-304 |
| Cow position: | chr7:61200846-61200552 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 1-304 |
| Cow position: | chr7:68867995-68867709 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 107, 58 |
| Conread position: | 1-305 |
| Cow position: | chr7:3633621-3633917 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 25, 77 |
| Conread position: | 1-306 |
| Cow position: | chr7:27981153-27981434 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 1-307 |
| Cow position: | chr7:1261909-1261620 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 1-307 |
| Cow position: | chr7:26012314-26012012 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 226 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 94, 152 |
| Conread position: | 1-307 |
| Cow position: | chr7:26802559-26802852 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 84, 32 |
| Conread position: | 1-307 |
| Cow position: | chr7:31204639-31204936 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 25, 35 |
| Conread position: | 1-307 |
| Cow position: | chr7:34199216-34198906 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-307 |
| Cow position: | chr7:39498129-39498424 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 34 |
| Conread position: | 1-307 |
| Cow position: | chr7:40262253-40262531 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 1-307 |
| Cow position: | chr7:41528087-41527789 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 69, 77 |
| Conread position: | 1-307 |
| Cow position: | chr7:45099425-45099130 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 117, 5 |
| Conread position: | 1-307 |
| Cow position: | chr7:48751711-48751998 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 109, 76 |
| Conread position: | 1-307 |
| Cow position: | chr7:59713355-59713066 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 75, 86 |
| Conread position: | 2-304 |
| Cow position: | chr7:40615125-40614831 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 111, 205 |
| Conread position: | 2-307 |
| Cow position: | chr7:62102481-62102186 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 98, 85 |
| Conread position: | 3-304 |
| Cow position: | chr7:25703334-25703622 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 159, 71 |
| Conread position: | 3-307 |
| Cow position: | chr7:25722780-25723078 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 116, 68 |
| Conread position: | 3-307 |
| Cow position: | chr7:38144770-38145068 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 235 |
| Conread position: | 3-307 |
| Cow position: | chr7:46823557-46823267 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 84, 100 |
| Conread position: | 3-349 |
| Cow position: | chr7:32913284-32913611 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 128, 13 |
| Conread position: | 7-307 |
| Cow position: | chr7:33632939-33633230 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 111, 31 |
| Conread position: | 7-307 |
| Cow position: | chr7:53034429-53034720 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 111, 31 |
| Conread position: | 9-304 |
| Cow position: | chr7:28427895-28427627 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 11-295 |
| Cow position: | chr7:37159054-37159335 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 11-307 |
| Cow position: | chr7:11869952-11870234 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 11-307 |
| Cow position: | chr7:61576038-61576330 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 168 |
| Conread position: | 13-304 |
| Cow position: | chr7:47771097-47771378 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 98, 186 |
| Conread position: | 33-307 |
| Cow position: | chr7:43941198-43940934 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 51, 86 |
| Conread position: | 37-307 |
| Cow position: | chr7:60489865-60489592 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 34, 41 |
| Conread position: | 109-299 |
| Cow position: | chr7:45955689-45955505 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 102, 126 |
| Conread position: | 109-304 |
| Cow position: | chr7:34222822-34222625 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 141, 98 |
| Conread position: | 109-307 |
| Cow position: | chr7:47876000-47876188 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 109-307 |
| Cow position: | chr7:48548117-48548312 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 86, 132 |
| Conread position: | 110-307 |
| Cow position: | chr7:41445105-41444917 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 96, 122 |
| Conread position: | 110-307 |
| Cow position: | chr7:48407080-48407261 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 110-314 |
| Cow position: | chr7:28918642-28918424 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 41, 150 |
| Conread position: | 110-319 |
| Cow position: | chr7:48444019-48444217 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 204, 124 |
| Conread position: | 111-304 |
| Cow position: | chr7:26665817-26665999 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 113-307 |
| Cow position: | chr7:49714612-49714431 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 114-307 |
| Cow position: | chr7:13822303-13822121 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 116-307 |
| Cow position: | chr7:19616970-19617151 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
Show alignments to all cow chromosomes.