Cow genome map
| Conread name: | rmga09_j8.y1 |
| Conread position: | 1-299 |
| Cow position: | chr9:39428615-39428340 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 117, 49 |
| Conread position: | 1-304 |
| Cow position: | chr9:11870391-11870684 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 117, 37 |
| Conread position: | 1-304 |
| Cow position: | chr9:24218362-24218057 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 117, 66 |
| Conread position: | 1-307 |
| Cow position: | chr9:5161885-5161596 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 86, 93 |
| Conread position: | 1-307 |
| Cow position: | chr9:27077070-27076784 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 156, 94 |
| Conread position: | 1-307 |
| Cow position: | chr9:32266206-32265914 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 104, 25 |
| Conread position: | 1-307 |
| Cow position: | chr9:34070701-34070409 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 1-307 |
| Cow position: | chr9:49492658-49492952 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 97, 146 |
| Conread position: | 1-307 |
| Cow position: | chr9:58251727-58252032 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 117, 236 |
| Conread position: | 1-334 |
| Cow position: | chr9:22827271-22827597 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 107, 167 |
| Conread position: | 1-338 |
| Cow position: | chr9:62763379-62763695 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 328, 69 |
| Conread position: | 2-307 |
| Cow position: | chr9:27085639-27085943 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 224 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 92, 237 |
| Conread position: | 3-299 |
| Cow position: | chr9:55214540-55214828 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 68, 72 |
| Conread position: | 3-304 |
| Cow position: | chr9:33823281-33823579 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 105, 60 |
| Conread position: | 3-307 |
| Cow position: | chr9:53602596-53602890 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 3-320 |
| Cow position: | chr9:19382507-19382816 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 113, 18 |
| Conread position: | 5-307 |
| Cow position: | chr9:5345432-5345736 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 82, 144 |
| Conread position: | 9-307 |
| Cow position: | chr9:41932261-41932547 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 112, 26 |
| Conread position: | 11-299 |
| Cow position: | chr9:50590397-50590665 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 11-307 |
| Cow position: | chr9:28948043-28948331 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 217 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 103, 81 |
| Conread position: | 12-304 |
| Cow position: | chr9:38032958-38032659 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 15, 237 |
| Conread position: | 17-307 |
| Cow position: | chr9:20961091-20960802 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 80, 200 |
| Conread position: | 35-307 |
| Cow position: | chr9:4858749-4859023 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 67, 205 |
| Conread position: | 40-320 |
| Cow position: | chr9:63654898-63654628 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 40 |
| Conread position: | 44-299 |
| Cow position: | chr9:13793724-13793959 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 36, 48 |
| Conread position: | 47-307 |
| Cow position: | chr9:38546624-38546878 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 39, 106 |
| Conread position: | 80-307 |
| Cow position: | chr9:48773584-48773803 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 37, 155 |
| Conread position: | 110-304 |
| Cow position: | chr9:10665746-10665564 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 110-307 |
| Cow position: | chr9:15006491-15006304 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 111-304 |
| Cow position: | chr9:8289262-8289448 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 124 |
| Conread position: | 112-307 |
| Cow position: | chr9:13847676-13847860 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 116-304 |
| Cow position: | chr9:8600653-8600833 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 117-307 |
| Cow position: | chr9:31062531-31062351 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 118-307 |
| Cow position: | chr9:9822949-9822766 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 118-307 |
| Cow position: | chr9:25972777-25972956 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 121-307 |
| Cow position: | chr9:9957345-9957517 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 133-307 |
| Cow position: | chr9:41957981-41958145 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 138-307 |
| Cow position: | chr9:23043267-23043430 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 96, 0 |
Show alignments to all cow chromosomes.