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Cow genome map

           
Conread name:
           
rmga16_o4.y2
        

               
Conread position:
               
1-163
               

               
Cow position:
               
chr15:7575146-7575310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr15:51401917-51402088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr15:4874000-4873829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
111, 21
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr15:27128237-27128062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr15:29340760-29340587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
108, 66
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr15:30813849-30814023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr15:36622180-36622009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
119, 92
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr15:44363896-44363721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr15:4713252-4713428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
66, 72
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr15:10088854-10088680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
109, 52
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr15:23703391-23703213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr15:19734123-19733947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr15:7750536-7750717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr15:29792297-29792555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr15:41792987-41792725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
15, 62
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr15:4728493-4728753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr15:6506362-6506098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr15:481907-482172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr15:7941760-7942026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
109, 95
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr15:25069151-25068887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:67223-66955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:3154261-3154529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:3494500-3494234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
173, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:4214504-4214773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:4769847-4770113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:4796612-4796352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:6464405-6464673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
112, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:6538283-6538547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
109, 76
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:6764514-6764247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
98, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:10243463-10243733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:11596038-11595773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:12442870-12443139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:13076869-13077133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
110, 32
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:21826210-21826479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:27934496-27934765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr15:39406584-39406316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr15:22161208-22160931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr15:25164760-25164487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr15:33285492-33285224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr15:33511469-33511196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr15:47842643-47842914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr15:17034290-17034018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
109, 33
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr15:35824731-35825011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr15:17236326-17236046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr15:22095731-22095444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
173, 34
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr15:53232158-53231858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr15:6944693-6944396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr15:36355397-36355075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr15:1602304-1602631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
112, 76
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr15:49258693-49258360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr15:19910999-19910649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr15:38876053-38876418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr15:33228714-33228355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
106, 83
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr15:27422775-27423164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr15:32690299-32690710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr15:53135418-53135005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-422
               

               
Cow position:
               
chr15:37744397-37744816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr15:7566346-7566762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr15:2928587-2929005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr15:7548186-7548606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
110, 131
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr15:16927426-16927881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr15:9267433-9267863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 92
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr15:2898912-2898486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
109, 99
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr15:25208137-25208583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 97
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr15:4925489-4925938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
108, 13
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr15:12417371-12416931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr15:15343765-15343320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr15:37370511-37370061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr15:5983972-5984425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 93
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr15:6082019-6082475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 188
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr15:363632-363191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr15:24821754-24822212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 66
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr15:31086171-31085702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 83
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr15:608786-608310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 288
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr15:6550270-6549806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
68, 59
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr15:7271684-7272151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr15:21831809-21832262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 52
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr15:23567499-23567959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr15:9870781-9871254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 196
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr15:19118991-19119445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 93
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr15:38899046-38898580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 83
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:143608-144078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:1329481-1329944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:1653316-1653787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:4642543-4643015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:4655172-4655637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:4676382-4676850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:7578502-7578972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:7841663-7842137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 263
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:9160426-9159958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:10456384-10456854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:13683672-13684108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
175, 52
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:18214912-18215384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:20458677-20459146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:22532863-22532396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:24617188-24616730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:25666590-25667064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:31949624-31949152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:37382248-37381780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:37395046-37395517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:38984018-38984489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:50957168-50957642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr15:6158524-6158997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr15:33313820-33314297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr15:442446-441969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr15:24797171-24797661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 273
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr15:34064287-34064766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
115, 8
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr15:16583081-16583554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr15:3257171-3256689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr15:11010953-11011455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 89
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr15:15707493-15707964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 188
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr15:24968412-24967936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-489
               

               
Cow position:
               
chr15:50302829-50302325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 274
               

               
Conread position:
               
1-490
               

               
Cow position:
               
chr15:40405-39921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 186
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr15:1298387-1297877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 92
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr15:5498407-5498892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr15:24568414-24567916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr15:6648070-6647577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 38
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr15:51632423-51632917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr15:32287110-32287640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 40
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr15:14855824-14856353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 93
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr15:21894441-21893898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
2-170
               

               
Cow position:
               
chr15:44164956-44165128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
2-171
               

               
Cow position:
               
chr15:19960818-19960644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
2-172
               

               
Cow position:
               
chr15:11657958-11658131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 92
               

               
Conread position:
               
2-173
               

               
Cow position:
               
chr15:25907850-25907677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
108, 82
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr15:32489120-32488945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr15:2805928-2805748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 95
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr15:22855212-22855024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
104, 39
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chr15:15881543-15881283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
107, 90
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr15:10336366-10336110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
99, 91
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr15:10476781-10476508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
61, 98
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr15:52607651-52607386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
138, 29
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr15:15234206-15233937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr15:18580243-18580510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr15:21152476-21152208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
114, 91
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr15:15215924-15215651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr15:48842035-48841780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 39
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr15:34744428-34744156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
2-258
               

               
Cow position:
               
chr15:32877928-32878211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr15:8937742-8938021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 61
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr15:38395240-38394960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr15:36435835-36435528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
37, 98
               

               
Conread position:
               
2-342
               

               
Cow position:
               
chr15:5913249-5912895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 92
               

               
Conread position:
               
2-427
               

               
Cow position:
               
chr15:8576497-8576922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-428
               

               
Cow position:
               
chr15:7962714-7962280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
2-429
               

               
Cow position:
               
chr15:44073790-44074217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
107, 141
               

               
Conread position:
               
2-444
               

               
Cow position:
               
chr15:20413919-20414360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
97, 266
               

               
Conread position:
               
2-445
               

               
Cow position:
               
chr15:25825231-25825677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 90
               

               
Conread position:
               
2-466
               

               
Cow position:
               
chr15:52197691-52198141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
2-467
               

               
Cow position:
               
chr15:22168687-22168223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-467
               

               
Cow position:
               
chr15:31993148-31992691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
2-468
               

               
Cow position:
               
chr15:13669281-13669738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-472
               

               
Cow position:
               
chr15:6906174-6905695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 49
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr15:5020707-5021173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr15:5567701-5568168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
172, 33
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr15:6163761-6163298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
178, 91
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr15:24044469-24044940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr15:30985171-30985629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
61, 269
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr15:41583539-41583069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr15:45610208-45610677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
108, 142
               

               
Conread position:
               
2-480
               

               
Cow position:
               
chr15:14506048-14505577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 60
               

               
Conread position:
               
2-480
               

               
Cow position:
               
chr15:43248134-43248618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 11
               

               
Conread position:
               
2-482
               

               
Cow position:
               
chr15:1776505-1776968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-512
               

               
Cow position:
               
chr15:36781685-36782213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-512
               

               
Cow position:
               
chr15:37984928-37985435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 187
               

               
Conread position:
               
2-512
               

               
Cow position:
               
chr15:38969755-38969243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
103, 54
               

               
Conread position:
               
2-513
               

               
Cow position:
               
chr15:6970601-6970101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-513
               

               
Cow position:
               
chr15:24285614-24285094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
2-513
               

               
Cow position:
               
chr15:31357256-31356749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr15:28126578-28126406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr15:4821727-4821467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 98
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr15:30809638-30809905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr15:45323631-45323357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
100, 90
               

               
Conread position:
               
3-359
               

               
Cow position:
               
chr15:10441969-10442321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 90
               

               
Conread position:
               
3-419
               

               
Cow position:
               
chr15:18661830-18662244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
107, 90
               

               
Conread position:
               
3-467
               

               
Cow position:
               
chr15:28039370-28038922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 11
               

               
Conread position:
               
3-474
               

               
Cow position:
               
chr15:31160938-31160474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
3-513
               

               
Cow position:
               
chr15:12272211-12271706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
94, 266
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr15:39090881-39090712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr15:9135358-9135632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
106, 89
               

               
Conread position:
               
4-422
               

               
Cow position:
               
chr15:21532792-21532378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
95, 263
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr15:45244935-45245351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 89
               

               
Conread position:
               
4-453
               

               
Cow position:
               
chr15:14578084-14577600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 89
               

               
Conread position:
               
4-463
               

               
Cow position:
               
chr15:21902822-21903277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 60
               

               
Conread position:
               
4-467
               

               
Cow position:
               
chr15:22752081-22751616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 90
               

               
Conread position:
               
4-474
               

               
Cow position:
               
chr15:15040815-15041276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 89
               

               
Conread position:
               
4-474
               

               
Cow position:
               
chr15:52611953-52611468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 89
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr15:3892931-3893402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
106, 89
               

               
Conread position:
               
4-484
               

               
Cow position:
               
chr15:6530216-6530701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 89
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr15:21910733-21910484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
105, 89
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr15:42727721-42727984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
5-427
               

               
Cow position:
               
chr15:29476194-29475773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
100, 157
               

               
Conread position:
               
5-429
               

               
Cow position:
               
chr15:33681279-33680850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 104
               

               
Conread position:
               
5-474
               

               
Cow position:
               
chr15:27747167-27746701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
105, 88
               

               
Conread position:
               
5-513
               

               
Cow position:
               
chr15:24129296-24128762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 9
               

               
Conread position:
               
6-172
               

               
Cow position:
               
chr15:8028669-8028501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
104, 87
               

               
Conread position:
               
6-251
               

               
Cow position:
               
chr15:7319903-7320165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
6-251
               

               
Cow position:
               
chr15:38102881-38103142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
109, 87
               

               
Conread position:
               
6-254
               

               
Cow position:
               
chr15:4953764-4954027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
104, 86
               

               
Conread position:
               
6-474
               

               
Cow position:
               
chr15:21909061-21908595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
104, 87
               

               
Conread position:
               
7-501
               

               
Cow position:
               
chr15:20533831-20534320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 49
               

               
Conread position:
               
8-254
               

               
Cow position:
               
chr15:52764113-52764375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
102, 85
               

               
Conread position:
               
8-445
               

               
Cow position:
               
chr15:24993888-24994333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 85
               

               
Conread position:
               
8-451
               

               
Cow position:
               
chr15:34140632-34140158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 166
               

               
Conread position:
               
9-291
               

               
Cow position:
               
chr15:21695556-21695858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
101, 85
               

               
Conread position:
               
9-474
               

               
Cow position:
               
chr15:35749945-35749461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 260
               

               
Conread position:
               
15-467
               

               
Cow position:
               
chr15:21913757-21913306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
95, 255
               

               
Conread position:
               
16-326
               

               
Cow position:
               
chr15:2969158-2968852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 66
               

               
Conread position:
               
20-506
               

               
Cow position:
               
chr15:38846693-38846221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 76
               

               
Conread position:
               
21-259
               

               
Cow position:
               
chr15:29968817-29968560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 63
               

               
Conread position:
               
21-474
               

               
Cow position:
               
chr15:6226591-6227031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 43
               

               
Conread position:
               
21-474
               

               
Cow position:
               
chr15:28924168-28924607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 72
               

               
Conread position:
               
24-254
               

               
Cow position:
               
chr15:22545267-22545021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
92, 69
               

               
Conread position:
               
24-283
               

               
Cow position:
               
chr15:53281573-53281312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
24-472
               

               
Cow position:
               
chr15:33258637-33258191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
86, 69
               

               
Conread position:
               
25-511
               

               
Cow position:
               
chr15:23332262-23332761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
26-254
               

               
Cow position:
               
chr15:287875-287635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
84, 68
               

               
Conread position:
               
26-451
               

               
Cow position:
               
chr15:42940549-42940972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
84, 67
               

               
Conread position:
               
26-474
               

               
Cow position:
               
chr15:4918460-4918908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
84, 70
               

               
Conread position:
               
27-480
               

               
Cow position:
               
chr15:33605516-33605074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
29-174
               

               
Cow position:
               
chr15:7237269-7237414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
84, 74
               

               
Conread position:
               
29-482
               

               
Cow position:
               
chr15:19403572-19403130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 45
               

               
Conread position:
               
33-482
               

               
Cow position:
               
chr15:21388579-21389019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 60
               

               
Conread position:
               
36-483
               

               
Cow position:
               
chr15:33976102-33976539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
37-473
               

               
Cow position:
               
chr15:43827188-43827614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 59
               

               
Conread position:
               
37-508
               

               
Cow position:
               
chr15:5234417-5234885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 56
               

               
Conread position:
               
41-506
               

               
Cow position:
               
chr15:38732024-38732510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
43-257
               

               
Cow position:
               
chr15:36643308-36643540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
43-428
               

               
Cow position:
               
chr15:38644592-38644210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
57-511
               

               
Cow position:
               
chr15:16640361-16639897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 5
               

               
Conread position:
               
64-251
               

               
Cow position:
               
chr15:276305-276109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
46, 30
               

               
Conread position:
               
64-513
               

               
Cow position:
               
chr15:16112969-16112514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 29
               

               
Conread position:
               
64-513
               

               
Cow position:
               
chr15:42143411-42142971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
66-482
               

               
Cow position:
               
chr15:7430543-7430126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
74-319
               

               
Cow position:
               
chr15:33526028-33525767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 222
               

               
Conread position:
               
80-473
               

               
Cow position:
               
chr15:43030476-43030868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
109-473
               

               
Cow position:
               
chr15:3572158-3572542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 298
               

               
Conread position:
               
109-474
               

               
Cow position:
               
chr15:33303875-33303487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 261
               

               
Conread position:
               
112-512
               

               
Cow position:
               
chr15:28177995-28177582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
43, 161
               

               
Conread position:
               
127-426
               

               
Cow position:
               
chr15:12359751-12359449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 137
               

               
Conread position:
               
142-482
               

               
Cow position:
               
chr15:14259447-14259777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 94
               

               
Conread position:
               
145-394
               

               
Cow position:
               
chr15:50976516-50976252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 255
               

               
Conread position:
               
147-474
               

               
Cow position:
               
chr15:42415743-42415416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
37, 117
               

               
Conread position:
               
183-468
               

               
Cow position:
               
chr15:34283925-34284196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
190-436
               

               
Cow position:
               
chr15:14322627-14322869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 69
               

               
Conread position:
               
192-474
               

               
Cow position:
               
chr15:35838668-35838931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
180, 61
               

               
Conread position:
               
194-443
               

               
Cow position:
               
chr15:41418395-41418633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
191, 53
               

               
Conread position:
               
195-375
               

               
Cow position:
               
chr15:12440286-12440455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
195-434
               

               
Cow position:
               
chr15:6627866-6628094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
223, 58
               

               
Conread position:
               
195-467
               

               
Cow position:
               
chr15:3819569-3819293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
58, 65
               

               
Conread position:
               
195-474
               

               
Cow position:
               
chr15:7827602-7827879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
195-474
               

               
Cow position:
               
chr15:40999637-40999910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
136, 60
               

               
Conread position:
               
195-489
               

               
Cow position:
               
chr15:9062161-9062460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 64
               

               
Conread position:
               
195-505
               

               
Cow position:
               
chr15:23767814-23768139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
195-506
               

               
Cow position:
               
chr15:17100274-17100586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
58, 121
               

               
Conread position:
               
196-431
               

               
Cow position:
               
chr15:10487464-10487701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
53, 61
               

               
Conread position:
               
198-429
               

               
Cow position:
               
chr15:13113895-13114111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
167, 49
               

               
Conread position:
               
198-445
               

               
Cow position:
               
chr15:53118746-53118506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
211, 56
               

               
Conread position:
               
198-474
               

               
Cow position:
               
chr15:4788549-4788811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
225, 50
               

               
Conread position:
               
204-513
               

               
Cow position:
               
chr15:30820417-30820719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 42
               

               
Conread position:
               
222-491
               

               
Cow position:
               
chr15:21523209-21522926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 154
               

               
Conread position:
               
229-421
               

               
Cow position:
               
chr15:8382542-8382731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
154, 34
               

               
Conread position:
               
251-475
               

               
Cow position:
               
chr15:27281241-27281025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
22, 47
               

               
Conread position:
               
253-474
               

               
Cow position:
               
chr15:40009275-40009492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 16
               

               
Conread position:
               
254-512
               

               
Cow position:
               
chr15:19771502-19771249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
42, 86
               

               
Conread position:
               
257-474
               

               
Cow position:
               
chr15:13515740-13515527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
257-474
               

               
Cow position:
               
chr15:23180793-23180593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
166, 15
               

               
Conread position:
               
257-474
               

               
Cow position:
               
chr15:53101959-53101745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
258-474
               

               
Cow position:
               
chr15:46868340-46868553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
9, 122
               

               
Conread position:
               
261-482
               

               
Cow position:
               
chr15:30002056-30001834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
115, 27
               

               
Conread position:
               
263-445
               

               
Cow position:
               
chr15:52204401-52204579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
267-473
               

               
Cow position:
               
chr15:241210-241001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
268-513
               

               
Cow position:
               
chr15:11362821-11363066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
201, 112
               

               
Conread position:
               
269-482
               

               
Cow position:
               
chr15:11658204-11658419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 157
               

               
Conread position:
               
271-474
               

               
Cow position:
               
chr15:16307774-16307571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 163
               

               
Conread position:
               
271-474
               

               
Cow position:
               
chr15:43913726-43913932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
272-447
               

               
Cow position:
               
chr15:33662851-33662674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
114, 141
               

               
Conread position:
               
272-466
               

               
Cow position:
               
chr15:18284598-18284403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 36
               

               
Conread position:
               
272-474
               

               
Cow position:
               
chr15:8428362-8428172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
272-474
               

               
Cow position:
               
chr15:36621775-36621571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 126
               

               
Conread position:
               
272-484
               

               
Cow position:
               
chr15:37716566-37716781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
112, 36
               

               
Conread position:
               
272-486
               

               
Cow position:
               
chr15:20370110-20370310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
272-491
               

               
Cow position:
               
chr15:16616551-16616341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
272-510
               

               
Cow position:
               
chr15:20472189-20472432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
114, 67
               

               
Conread position:
               
272-513
               

               
Cow position:
               
chr15:6045957-6046202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
151, 36
               

               
Conread position:
               
272-513
               

               
Cow position:
               
chr15:46611275-46611048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
273-474
               

               
Cow position:
               
chr15:51427467-51427665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
273-482
               

               
Cow position:
               
chr15:43626817-43626617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
200, 10
               

               
Conread position:
               
275-467
               

               
Cow position:
               
chr15:18605738-18605555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
148, 70
               

               
Conread position:
               
275-474
               

               
Cow position:
               
chr15:4485498-4485299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
47, 79
               

               
Conread position:
               
275-474
               

               
Cow position:
               
chr15:23703127-23702933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
275-474
               

               
Cow position:
               
chr15:51898578-51898388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
275-503
               

               
Cow position:
               
chr15:12785790-12785547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
276-467
               

               
Cow position:
               
chr15:45479360-45479169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
147, 111
               

               
Conread position:
               
276-474
               

               
Cow position:
               
chr15:52739771-52739966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
142, 44
               

               
Conread position:
               
277-467
               

               
Cow position:
               
chr15:49738695-49738880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
279-474
               

               
Cow position:
               
chr15:39490301-39490498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
280-474
               

               
Cow position:
               
chr15:5683483-5683299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
280-492
               

               
Cow position:
               
chr15:23798170-23798392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 204
               

               
Conread position:
               
281-474
               

               
Cow position:
               
chr15:33525777-33525575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
283-473
               

               
Cow position:
               
chr15:38883502-38883311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 151
               

               
Conread position:
               
283-482
               

               
Cow position:
               
chr15:35642366-35642169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
285-482
               

               
Cow position:
               
chr15:4535251-4535060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 99
               

               
Conread position:
               
285-482
               

               
Cow position:
               
chr15:12723422-12723236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
191, 35
               

               
Conread position:
               
285-484
               

               
Cow position:
               
chr15:29792568-29792763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
285-503
               

               
Cow position:
               
chr15:39406078-39405860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 23
               

               
Conread position:
               
286-474
               

               
Cow position:
               
chr15:14020814-14020631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
290-474
               

               
Cow position:
               
chr15:33285221-33285037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
133, 90
               

               
Conread position:
               
290-474
               

               
Cow position:
               
chr15:39621677-39621499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
133, 79
               

               
Conread position:
               
291-474
               

               
Cow position:
               
chr15:31857930-31857747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
95, 142
               

               
Conread position:
               
293-474
               

               
Cow position:
               
chr15:52778193-52778371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
130, 89
               

               
Conread position:
               
294-474
               

               
Cow position:
               
chr15:15881268-15881087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
295-482
               

               
Cow position:
               
chr15:26158284-26158467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
181, 13
               

               
Conread position:
               
298-480
               

               
Cow position:
               
chr15:13387414-13387233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
88, 137
               

               
Conread position:
               
302-474
               

               
Cow position:
               
chr15:12304968-12304800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
304-482
               

               
Cow position:
               
chr15:50322920-50322745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
172, 82
               

               
Conread position:
               
304-484
               

               
Cow position:
               
chr15:30982241-30982072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
156, 39
               

               
Conread position:
               
308-489
               

               
Cow position:
               
chr15:33243479-33243285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
308-491
               

               
Cow position:
               
chr15:39598559-39598382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
168, 56
               

               
Conread position:
               
310-474
               

               
Cow position:
               
chr15:11995706-11995868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
76, 53
               

               
Conread position:
               
310-513
               

               
Cow position:
               
chr15:10088633-10088436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
150, 57
               

               
Conread position:
               
313-487
               

               
Cow position:
               
chr15:20082076-20081902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
72, 120
               

               
Conread position:
               
315-474
               

               
Cow position:
               
chr15:20390964-20391116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
315-482
               

               
Cow position:
               
chr15:10846036-10845869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
108, 67
               

               
Conread position:
               
323-474
               

               
Cow position:
               
chr15:8007287-8007137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
100, 8
               

               
Conread position:
               
324-463
               

               
Cow position:
               
chr15:6168210-6168352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
324-474
               

               
Cow position:
               
chr15:26573692-26573536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
324-490
               

               
Cow position:
               
chr15:225498-225662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
326-474
               

               
Cow position:
               
chr15:37777654-37777515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
328-473
               

               
Cow position:
               
chr15:26918972-26919116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
21, 105
               

               
Conread position:
               
332-473
               

               
Cow position:
               
chr15:1804031-1804176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
337-512
               

               
Cow position:
               
chr15:2141003-2141183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
341-482
               

               
Cow position:
               
chr15:36773406-36773550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 94
               

               
Conread position:
               
345-472
               

               
Cow position:
               
chr15:5044171-5044294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
345-505
               

               
Cow position:
               
chr15:39619442-39619278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
351-501
               

               
Cow position:
               
chr15:32323927-32324081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
359-507
               

               
Cow position:
               
chr15:22871880-22871727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
361-482
               

               
Cow position:
               
chr15:16657760-16657641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 13
               
Show alignments to all cow chromosomes.