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Cow genome map

           
Conread name:
           
rmga16_o4.y2
        

               
Conread position:
               
1-164
               

               
Cow position:
               
chr24:45009953-45010119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 93
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr24:15692180-15692355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr24:20923018-20923188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr24:30484493-30484229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
107, 23
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr24:27608693-27608434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
175, 27
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr24:31811631-31811893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr24:6035409-6035141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr24:9550029-9550298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr24:14378730-14378472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
107, 61
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr24:14760670-14760939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr24:15793243-15792979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
109, 57
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr24:17544192-17543923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr24:22975580-22975845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr24:26412817-26413086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr24:29375779-29376040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr24:36780187-36780456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
109, 99
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr24:40382067-40381799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr24:27148856-27149117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
179, 35
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr24:28601290-28601021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr24:37946411-37946132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr24:39900878-39900609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
173, 92
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr24:12348503-12348777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr24:13117403-13117676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr24:20283441-20283170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
109, 99
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr24:35793619-35793892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr24:6067576-6067298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr24:9088026-9087753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
176, 92
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr24:144583-144295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr24:31758529-31758249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
109, 50
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr24:6449978-6450272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
179, 92
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr24:40056280-40055974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr24:14146104-14145813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr24:34761280-34761587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
114, 13
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr24:10243791-10243488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr24:31382140-31382447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 89
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr24:35067024-35066630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
92, 268
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr24:33938626-33939022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr24:37037054-37037449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr24:31308861-31309263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
45, 97
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr24:4616306-4615899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 92
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr24:12146819-12146405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
108, 205
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr24:36722171-36722580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr24:19885998-19886423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr24:19679312-19679740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr24:16557213-16556766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr24:38479513-38479106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 98
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr24:23616135-23616559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr24:31815994-31816461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr24:17406839-17407273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr24:29191054-29191492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr24:12090743-12091191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr24:18222724-18222275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr24:19815643-19815196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
98, 267
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr24:40466642-40466196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
109, 52
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr24:39482943-39483371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr24:24250164-24250623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr24:13304729-13304271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 52
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr24:17364210-17363748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 73
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr24:22193166-22193630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr24:31302456-31302914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
63, 45
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr24:2391625-2392103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 50
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr24:6160644-6160182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr24:7782360-7781889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr24:11081012-11080555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr24:11118727-11119191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr24:12447262-12447719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr24:18266722-18266259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr24:19466490-19466015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 61
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr24:20220961-20221427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr24:27290317-27290777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr24:28062388-28062858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr24:28721331-28721797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 34
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr24:33239112-33238636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr24:35823157-35822686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr24:39160101-39159640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr24:6149476-6149936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 46
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr24:11839625-11840104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr24:21265054-21264593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 55
               

               
Conread position:
               
1-485
               

               
Cow position:
               
chr24:27905874-27906355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr24:39217185-39216695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr24:6340473-6340955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 85
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr24:24137411-24136908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr24:29064202-29063707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr24:16558243-16557735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr24:32609079-32609589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 105
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr24:32853980-32854488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
95, 30
               

               
Conread position:
               
2-171
               

               
Cow position:
               
chr24:6154271-6154444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr24:17752480-17752307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
107, 161
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr24:20507276-20507100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
68, 12
               

               
Conread position:
               
2-178
               

               
Cow position:
               
chr24:14173012-14172833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
108, 60
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr24:5652524-5652343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr24:40771559-40771809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr24:7744028-7744294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr24:13373736-13373468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr24:16611008-16610741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr24:21769891-21770159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr24:17834003-17833732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
108, 17
               

               
Conread position:
               
2-258
               

               
Cow position:
               
chr24:11886605-11886875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr24:39500845-39500562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr24:33291731-33291424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
106, 253
               

               
Conread position:
               
2-361
               

               
Cow position:
               
chr24:39913857-39914208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 62
               

               
Conread position:
               
2-369
               

               
Cow position:
               
chr24:36800838-36801207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr24:45216674-45216238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-446
               

               
Cow position:
               
chr24:15666967-15666525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 91
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr24:32740157-32739707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
97, 142
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr24:36555387-36554929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-480
               

               
Cow position:
               
chr24:25229641-25229146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
2-510
               

               
Cow position:
               
chr24:18075577-18076097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
2-513
               

               
Cow position:
               
chr24:27632831-27633361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 65
               

               
Conread position:
               
2-513
               

               
Cow position:
               
chr24:29679865-29679356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 142
               

               
Conread position:
               
3-197
               

               
Cow position:
               
chr24:10255702-10255507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
107, 32
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr24:12264254-12263981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr24:38814415-38814909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
3-511
               

               
Cow position:
               
chr24:18604630-18605165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
107, 30
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr24:40497958-40497786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
106, 90
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr24:35872483-35872224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
106, 18
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr24:11327118-11327395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr24:27503143-27502876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
4-258
               

               
Cow position:
               
chr24:23052124-23051858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
173, 105
               

               
Conread position:
               
4-424
               

               
Cow position:
               
chr24:40149623-40149209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
96, 10
               

               
Conread position:
               
4-474
               

               
Cow position:
               
chr24:14279335-14279800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 25
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr24:27845076-27844811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
118, 88
               

               
Conread position:
               
5-484
               

               
Cow position:
               
chr24:18971061-18970590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
6-172
               

               
Cow position:
               
chr24:6102191-6102359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
104, 87
               

               
Conread position:
               
6-251
               

               
Cow position:
               
chr24:29073232-29072971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
104, 87
               

               
Conread position:
               
6-254
               

               
Cow position:
               
chr24:33639722-33639458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
104, 87
               

               
Conread position:
               
6-258
               

               
Cow position:
               
chr24:32693151-32693419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
104, 29
               

               
Conread position:
               
6-425
               

               
Cow position:
               
chr24:3332788-3332338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
142, 88
               

               
Conread position:
               
6-431
               

               
Cow position:
               
chr24:45004374-45004822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 56
               

               
Conread position:
               
6-474
               

               
Cow position:
               
chr24:17860820-17860349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 87
               

               
Conread position:
               
6-474
               

               
Cow position:
               
chr24:33230113-33230582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
104, 89
               

               
Conread position:
               
6-482
               

               
Cow position:
               
chr24:11006658-11007135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 87
               

               
Conread position:
               
7-482
               

               
Cow position:
               
chr24:33622038-33621574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 77
               

               
Conread position:
               
8-513
               

               
Cow position:
               
chr24:40035317-40034818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
102, 85
               

               
Conread position:
               
9-172
               

               
Cow position:
               
chr24:26388014-26387849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 84
               

               
Conread position:
               
9-482
               

               
Cow position:
               
chr24:27053041-27052579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 84
               

               
Conread position:
               
10-482
               

               
Cow position:
               
chr24:29596357-29595895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 83
               

               
Conread position:
               
14-473
               

               
Cow position:
               
chr24:20024065-20024521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 80
               

               
Conread position:
               
15-174
               

               
Cow position:
               
chr24:34396687-34396525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
16-262
               

               
Cow position:
               
chr24:30870189-30869925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
16-513
               

               
Cow position:
               
chr24:17720639-17720138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
94, 77
               

               
Conread position:
               
20-490
               

               
Cow position:
               
chr24:32213211-32212742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
96, 73
               

               
Conread position:
               
21-251
               

               
Cow position:
               
chr24:17491364-17491610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
82, 73
               

               
Conread position:
               
21-429
               

               
Cow position:
               
chr24:19836959-19837364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
89, 72
               

               
Conread position:
               
21-474
               

               
Cow position:
               
chr24:15880877-15881327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
94, 72
               

               
Conread position:
               
21-484
               

               
Cow position:
               
chr24:39238260-39238718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
21-507
               

               
Cow position:
               
chr24:40974455-40974939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 75
               

               
Conread position:
               
21-512
               

               
Cow position:
               
chr24:33943862-33944355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 72
               

               
Conread position:
               
23-509
               

               
Cow position:
               
chr24:16267241-16267718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 51
               

               
Conread position:
               
24-254
               

               
Cow position:
               
chr24:16541381-16541135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 69
               

               
Conread position:
               
24-420
               

               
Cow position:
               
chr24:28336081-28335683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 43
               

               
Conread position:
               
24-512
               

               
Cow position:
               
chr24:39219372-39218895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 43
               

               
Conread position:
               
25-463
               

               
Cow position:
               
chr24:7001604-7001169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 68
               

               
Conread position:
               
26-254
               

               
Cow position:
               
chr24:13819403-13819650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
27-474
               

               
Cow position:
               
chr24:6141490-6141052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
28-262
               

               
Cow position:
               
chr24:27747881-27748125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
82, 56
               

               
Conread position:
               
28-512
               

               
Cow position:
               
chr24:19475582-19476057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 32
               

               
Conread position:
               
30-174
               

               
Cow position:
               
chr24:31357329-31357475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
32-254
               

               
Cow position:
               
chr24:18847388-18847616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 60
               

               
Conread position:
               
32-474
               

               
Cow position:
               
chr24:32205332-32204888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 62
               

               
Conread position:
               
36-464
               

               
Cow position:
               
chr24:36729934-36730400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
39-258
               

               
Cow position:
               
chr24:9616481-9616260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 54
               

               
Conread position:
               
45-356
               

               
Cow position:
               
chr24:5682769-5683093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
47-482
               

               
Cow position:
               
chr24:29360491-29360079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
48-200
               

               
Cow position:
               
chr24:20225381-20225220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 45
               

               
Conread position:
               
53-395
               

               
Cow position:
               
chr24:27754184-27754522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
57, 41
               

               
Conread position:
               
54-500
               

               
Cow position:
               
chr24:814763-814331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
55-482
               

               
Cow position:
               
chr24:36174281-36173868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
54, 167
               

               
Conread position:
               
58-447
               

               
Cow position:
               
chr24:24002475-24002862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
58-482
               

               
Cow position:
               
chr24:43432277-43432708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 269
               

               
Conread position:
               
60-282
               

               
Cow position:
               
chr24:33052799-33052562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 33
               

               
Conread position:
               
64-473
               

               
Cow position:
               
chr24:39441054-39440649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
65-474
               

               
Cow position:
               
chr24:35571991-35572394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
66-499
               

               
Cow position:
               
chr24:8814505-8814064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
44, 217
               

               
Conread position:
               
79-453
               

               
Cow position:
               
chr24:37975548-37975186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
80-482
               

               
Cow position:
               
chr24:30545366-30544944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
86-474
               

               
Cow position:
               
chr24:5141456-5141850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 186
               

               
Conread position:
               
87-482
               

               
Cow position:
               
chr24:27809704-27810102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 102
               

               
Conread position:
               
87-502
               

               
Cow position:
               
chr24:34564650-34565066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
88-480
               

               
Cow position:
               
chr24:30860151-30860548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
22, 183
               

               
Conread position:
               
91-497
               

               
Cow position:
               
chr24:2731050-2730639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
96-482
               

               
Cow position:
               
chr24:20970256-20969884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
10, 91
               

               
Conread position:
               
104-491
               

               
Cow position:
               
chr24:18485454-18485072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
109-474
               

               
Cow position:
               
chr24:29673070-29673426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 48
               

               
Conread position:
               
111-482
               

               
Cow position:
               
chr24:44987821-44987464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 72
               

               
Conread position:
               
113-472
               

               
Cow position:
               
chr24:7917814-7917458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 38
               

               
Conread position:
               
117-482
               

               
Cow position:
               
chr24:27874164-27874517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 85
               

               
Conread position:
               
123-474
               

               
Cow position:
               
chr24:3631081-3631415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
150, 63
               

               
Conread position:
               
133-474
               

               
Cow position:
               
chr24:211555-211891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
113, 47
               

               
Conread position:
               
148-513
               

               
Cow position:
               
chr24:15508946-15508587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 105
               

               
Conread position:
               
179-474
               

               
Cow position:
               
chr24:22433238-22433541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 5
               

               
Conread position:
               
195-447
               

               
Cow position:
               
chr24:32014774-32015008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
228, 61
               

               
Conread position:
               
195-474
               

               
Cow position:
               
chr24:31159250-31159523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 184
               

               
Conread position:
               
195-480
               

               
Cow position:
               
chr24:15057041-15057312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 59
               

               
Conread position:
               
195-482
               

               
Cow position:
               
chr24:18695242-18695535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
69, 197
               

               
Conread position:
               
195-500
               

               
Cow position:
               
chr24:39350577-39350278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 55
               

               
Conread position:
               
195-501
               

               
Cow position:
               
chr24:6102459-6102766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
51, 141
               

               
Conread position:
               
196-467
               

               
Cow position:
               
chr24:39123514-39123764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
197-414
               

               
Cow position:
               
chr24:30892911-30892705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
182, 61
               

               
Conread position:
               
203-474
               

               
Cow position:
               
chr24:3430380-3430639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
237-511
               

               
Cow position:
               
chr24:35795072-35794787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 201
               

               
Conread position:
               
254-491
               

               
Cow position:
               
chr24:44041321-44041086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
19, 128
               

               
Conread position:
               
261-480
               

               
Cow position:
               
chr24:34369309-34369096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
125, 53
               

               
Conread position:
               
263-475
               

               
Cow position:
               
chr24:27726304-27726108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
267-482
               

               
Cow position:
               
chr24:28600904-28600699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
83, 12
               

               
Conread position:
               
272-474
               

               
Cow position:
               
chr24:27267343-27267540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
272-474
               

               
Cow position:
               
chr24:34315066-34315260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
272-474
               

               
Cow position:
               
chr24:38347387-38347591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
272-482
               

               
Cow position:
               
chr24:18734652-18734436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
272-482
               

               
Cow position:
               
chr24:21860511-21860308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
151, 10
               

               
Conread position:
               
272-491
               

               
Cow position:
               
chr24:2675039-2675246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
204, 45
               

               
Conread position:
               
272-491
               

               
Cow position:
               
chr24:42007454-42007665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
205, 36
               

               
Conread position:
               
272-512
               

               
Cow position:
               
chr24:25320697-25320948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 230
               

               
Conread position:
               
273-474
               

               
Cow position:
               
chr24:27465863-27465671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 98
               

               
Conread position:
               
273-474
               

               
Cow position:
               
chr24:34532832-34533034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 152
               

               
Conread position:
               
273-482
               

               
Cow position:
               
chr24:38374994-38375200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
94, 42
               

               
Conread position:
               
275-474
               

               
Cow position:
               
chr24:37246507-37246305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
276-463
               

               
Cow position:
               
chr24:28600142-28599966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
154, 78
               

               
Conread position:
               
276-474
               

               
Cow position:
               
chr24:42345296-42345096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
110, 14
               

               
Conread position:
               
276-482
               

               
Cow position:
               
chr24:3152864-3152665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
137, 34
               

               
Conread position:
               
276-482
               

               
Cow position:
               
chr24:18324328-18324537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
278-482
               

               
Cow position:
               
chr24:35073806-35074008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
198, 106
               

               
Conread position:
               
279-482
               

               
Cow position:
               
chr24:27941293-27941096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
107, 69
               

               
Conread position:
               
283-507
               

               
Cow position:
               
chr24:17567109-17567326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
193, 80
               

               
Conread position:
               
284-463
               

               
Cow position:
               
chr24:250849-250675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 57
               

               
Conread position:
               
284-475
               

               
Cow position:
               
chr24:6900544-6900734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
139, 98
               

               
Conread position:
               
285-475
               

               
Cow position:
               
chr24:7913719-7913911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
285-513
               

               
Cow position:
               
chr24:40849885-40850117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
138, 23
               

               
Conread position:
               
290-480
               

               
Cow position:
               
chr24:18390562-18390377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
291-482
               

               
Cow position:
               
chr24:17955720-17955526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
48, 5
               

               
Conread position:
               
294-512
               

               
Cow position:
               
chr24:16994624-16994835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
174, 25
               

               
Conread position:
               
296-501
               

               
Cow position:
               
chr24:5151967-5152174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
309-501
               

               
Cow position:
               
chr24:41068013-41068206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
312-467
               

               
Cow position:
               
chr24:18771435-18771289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
314-512
               

               
Cow position:
               
chr24:6487670-6487868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
315-463
               

               
Cow position:
               
chr24:18474997-18474850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 33
               

               
Conread position:
               
315-474
               

               
Cow position:
               
chr24:20942920-20943073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
316-506
               

               
Cow position:
               
chr24:2096137-2095950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
160, 66
               

               
Conread position:
               
321-501
               

               
Cow position:
               
chr24:24457491-24457308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 71
               

               
Conread position:
               
331-453
               

               
Cow position:
               
chr24:6742082-6741960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
92, 51
               

               
Conread position:
               
333-475
               

               
Cow position:
               
chr24:20250135-20249990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
334-463
               

               
Cow position:
               
chr24:27299941-27300069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
338-492
               

               
Cow position:
               
chr24:10841442-10841286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
342-474
               

               
Cow position:
               
chr24:29540133-29540001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
43, 91
               

               
Conread position:
               
343-513
               

               
Cow position:
               
chr24:16509751-16509925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 31
               

               
Conread position:
               
351-474
               

               
Cow position:
               
chr24:5911-5790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
352-482
               

               
Cow position:
               
chr24:34008793-34008661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
356-474
               

               
Cow position:
               
chr24:352813-352699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
361-474
               

               
Cow position:
               
chr24:29708007-29707891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
62, 23
               
Show alignments to all cow chromosomes.