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Cow genome map

           
Conread name:
           
rmga16_o4.y2
        

               
Conread position:
               
1-168
               

               
Cow position:
               
chr25:32849738-32849570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
101, 92
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr25:5823931-5824103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr25:20786067-20785894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr25:14808571-14808746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr25:24669900-24669721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
76, 97
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr25:33466433-33466608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
110, 95
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr25:2516765-2516938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
109, 42
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr25:12755970-12755714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr25:11666130-11666385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
108, 93
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr25:23394330-23394581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
116, 91
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr25:26228056-26228311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
13, 87
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr25:9595781-9596037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr25:24779064-24779319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
109, 95
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr25:18072676-18072929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
174, 81
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr25:36149326-36149062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
55, 61
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr25:11896027-11895758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr25:2595449-2595720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
154, 93
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr25:13960527-13960798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
109, 99
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr25:14755947-14755688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
173, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr25:16136622-16136887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
110, 13
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr25:17553802-17553532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr25:18886016-18885749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
109, 78
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr25:26682029-26682296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
107, 83
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr25:26923311-26923580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr25:29802277-29802008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr25:34502219-34501950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr25:39386367-39386100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr25:41121472-41121740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr25:41364504-41364245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
115, 91
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr25:8572407-8572135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
105, 53
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr25:20634080-20634336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr25:26353298-26353027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr25:8120239-8120514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr25:29312854-29312569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
35, 96
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr25:25510357-25510635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr25:14568896-14569176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 30
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr25:26282492-26282774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr25:35625771-35625480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
100, 76
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr25:28274979-28274658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
109, 51
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr25:34164094-34163767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr25:21041283-21041633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr25:17992679-17992323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr25:19131497-19131871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 13
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr25:26791496-26791883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
109, 99
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr25:24654707-24654296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr25:23829653-23829236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr25:17994830-17994405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
109, 99
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr25:13429659-13429249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
107, 32
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr25:27510800-27510348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 251
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr25:28920343-28920793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr25:18323891-18323443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr25:28863337-28863785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr25:4522354-4521919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 66
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr25:17658081-17658529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr25:41356335-41355871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr25:2135827-2136282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr25:13955922-13955451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr25:14954566-14954093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr25:17599030-17598561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr25:26755935-26756406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr25:34343442-34342965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
96, 13
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr25:33959781-33959324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 94
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr25:12203931-12204407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr25:25826918-25827406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 61
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr25:28188519-28188009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 13
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr25:33838840-33839315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 102
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr25:35567422-35566911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
99, 261
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr25:34013291-34012787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr25:16922328-16921821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 35
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr25:21950595-21951095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 45
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr25:36392501-36391989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
96, 261
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr25:34659636-34659133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr25:35608259-35607751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
2-175
               

               
Cow position:
               
chr25:18154492-18154666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-181
               

               
Cow position:
               
chr25:27543540-27543362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
108, 88
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr25:3968873-3969124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
106, 91
               

               
Conread position:
               
2-252
               

               
Cow position:
               
chr25:17562533-17562798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr25:35446409-35446677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr25:36765832-36765564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
108, 98
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr25:4488201-4488469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
98, 62
               

               
Conread position:
               
2-258
               

               
Cow position:
               
chr25:32607051-32606780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr25:13962273-13962549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr25:25754534-25754246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 93
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr25:15005670-15005987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
108, 14
               

               
Conread position:
               
2-404
               

               
Cow position:
               
chr25:36871321-36871723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 92
               

               
Conread position:
               
2-416
               

               
Cow position:
               
chr25:25480170-25479755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
94, 267
               

               
Conread position:
               
2-417
               

               
Cow position:
               
chr25:10580625-10580204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-435
               

               
Cow position:
               
chr25:5568308-5567836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 14
               

               
Conread position:
               
2-445
               

               
Cow position:
               
chr25:15368150-15368579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 70
               

               
Conread position:
               
2-446
               

               
Cow position:
               
chr25:11956297-11956730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 40
               

               
Conread position:
               
2-464
               

               
Cow position:
               
chr25:17682312-17681855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
2-467
               

               
Cow position:
               
chr25:18310238-18310726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-467
               

               
Cow position:
               
chr25:18490540-18490996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 60
               

               
Conread position:
               
2-473
               

               
Cow position:
               
chr25:38439624-38440092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr25:13332882-13333362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 271
               

               
Conread position:
               
2-512
               

               
Cow position:
               
chr25:30279743-30279237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 41
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr25:35077200-35076930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
107, 90
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr25:2624109-2624436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
67, 58
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr25:37593873-37594316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 19
               

               
Conread position:
               
4-252
               

               
Cow position:
               
chr25:9268633-9268897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr25:32278564-32278212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 89
               

               
Conread position:
               
4-410
               

               
Cow position:
               
chr25:29335950-29336361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
17, 90
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr25:11584979-11585414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 71
               

               
Conread position:
               
4-464
               

               
Cow position:
               
chr25:18181589-18182036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
177, 43
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr25:24136992-24136502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 89
               

               
Conread position:
               
4-482
               

               
Cow position:
               
chr25:18448305-18448775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 57
               

               
Conread position:
               
6-174
               

               
Cow position:
               
chr25:11929095-11928919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
6-258
               

               
Cow position:
               
chr25:18189906-18189638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
104, 88
               

               
Conread position:
               
6-481
               

               
Cow position:
               
chr25:35612866-35612370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 87
               

               
Conread position:
               
7-166
               

               
Cow position:
               
chr25:41135284-41135123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
103, 86
               

               
Conread position:
               
7-251
               

               
Cow position:
               
chr25:22413010-22412751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 54
               

               
Conread position:
               
7-467
               

               
Cow position:
               
chr25:24572539-24572990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 57
               

               
Conread position:
               
8-254
               

               
Cow position:
               
chr25:18486946-18487207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
102, 64
               

               
Conread position:
               
8-512
               

               
Cow position:
               
chr25:40321821-40321323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 74
               

               
Conread position:
               
9-356
               

               
Cow position:
               
chr25:598803-599149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
99, 84
               

               
Conread position:
               
9-467
               

               
Cow position:
               
chr25:26111754-26112189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 84
               

               
Conread position:
               
12-373
               

               
Cow position:
               
chr25:23571511-23571143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
13-474
               

               
Cow position:
               
chr25:22314681-22315133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
15-371
               

               
Cow position:
               
chr25:22550116-22549784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
160, 78
               

               
Conread position:
               
16-508
               

               
Cow position:
               
chr25:2110561-2111038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
19-474
               

               
Cow position:
               
chr25:24168448-24167973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 112
               

               
Conread position:
               
21-250
               

               
Cow position:
               
chr25:40906794-40906549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
88, 72
               

               
Conread position:
               
21-268
               

               
Cow position:
               
chr25:33978924-33978664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
89, 72
               

               
Conread position:
               
21-482
               

               
Cow position:
               
chr25:11437320-11436873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 72
               

               
Conread position:
               
27-254
               

               
Cow position:
               
chr25:34000172-34000416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
28-482
               

               
Cow position:
               
chr25:36778988-36779434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
31-258
               

               
Cow position:
               
chr25:16002261-16002021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
35-449
               

               
Cow position:
               
chr25:3992286-3992697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 58
               

               
Conread position:
               
41-482
               

               
Cow position:
               
chr25:11662308-11661879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 19
               

               
Conread position:
               
47-482
               

               
Cow position:
               
chr25:13569664-13569233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 45
               

               
Conread position:
               
48-251
               

               
Cow position:
               
chr25:13787460-13787679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 45
               

               
Conread position:
               
48-474
               

               
Cow position:
               
chr25:4002312-4002729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
48-513
               

               
Cow position:
               
chr25:38135232-38135721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 356
               

               
Conread position:
               
53-254
               

               
Cow position:
               
chr25:28272828-28273046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
53-467
               

               
Cow position:
               
chr25:18294801-18294393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 40
               

               
Conread position:
               
61-167
               

               
Cow position:
               
chr25:16400919-16400812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 77
               

               
Conread position:
               
64-337
               

               
Cow position:
               
chr25:13736878-13736591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
70-510
               

               
Cow position:
               
chr25:26654439-26654883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
73-512
               

               
Cow position:
               
chr25:22530822-22531254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
81-474
               

               
Cow position:
               
chr25:14225260-14224875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
86-509
               

               
Cow position:
               
chr25:20060482-20060057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
88-479
               

               
Cow position:
               
chr25:9641893-9642288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
97-460
               

               
Cow position:
               
chr25:33664336-33663987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
139, 88
               

               
Conread position:
               
109-351
               

               
Cow position:
               
chr25:12521819-12521567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
65, 130
               

               
Conread position:
               
109-513
               

               
Cow position:
               
chr25:7216394-7216804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 95
               

               
Conread position:
               
112-474
               

               
Cow position:
               
chr25:24727210-24726853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
114, 65
               

               
Conread position:
               
117-491
               

               
Cow position:
               
chr25:15319510-15319866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 57
               

               
Conread position:
               
117-511
               

               
Cow position:
               
chr25:20007696-20008108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 162
               

               
Conread position:
               
119-505
               

               
Cow position:
               
chr25:6961589-6961192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
29, 254
               

               
Conread position:
               
122-513
               

               
Cow position:
               
chr25:20069312-20069698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
187-436
               

               
Cow position:
               
chr25:33112348-33112105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
189, 71
               

               
Conread position:
               
193-482
               

               
Cow position:
               
chr25:6474447-6474160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
195-417
               

               
Cow position:
               
chr25:4715790-4716016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
79, 103
               

               
Conread position:
               
195-510
               

               
Cow position:
               
chr25:5756363-5756667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
189, 52
               

               
Conread position:
               
205-482
               

               
Cow position:
               
chr25:5407403-5407676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
48, 112
               

               
Conread position:
               
208-484
               

               
Cow position:
               
chr25:32063515-32063789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
174, 39
               

               
Conread position:
               
213-474
               

               
Cow position:
               
chr25:448669-448416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
226-513
               

               
Cow position:
               
chr25:5837282-5836997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
44, 36
               

               
Conread position:
               
232-512
               

               
Cow position:
               
chr25:12097534-12097808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
245-467
               

               
Cow position:
               
chr25:21245901-21245682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 7
               

               
Conread position:
               
253-468
               

               
Cow position:
               
chr25:18988091-18988304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 22
               

               
Conread position:
               
253-474
               

               
Cow position:
               
chr25:20785870-20785657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
258-473
               

               
Cow position:
               
chr25:20023682-20023462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
12, 182
               

               
Conread position:
               
262-474
               

               
Cow position:
               
chr25:21266726-21266938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
81, 124
               

               
Conread position:
               
262-513
               

               
Cow position:
               
chr25:22297297-22297049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 107
               

               
Conread position:
               
263-474
               

               
Cow position:
               
chr25:23389557-23389351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
265-472
               

               
Cow position:
               
chr25:17566311-17566514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
158, 11
               

               
Conread position:
               
267-473
               

               
Cow position:
               
chr25:17712259-17712464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 115
               

               
Conread position:
               
268-474
               

               
Cow position:
               
chr25:24008451-24008246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
270-465
               

               
Cow position:
               
chr25:11139378-11139570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
113, 30
               

               
Conread position:
               
271-474
               

               
Cow position:
               
chr25:6464300-6464103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
152, 106
               

               
Conread position:
               
271-482
               

               
Cow position:
               
chr25:14196584-14196797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
41, 163
               

               
Conread position:
               
272-461
               

               
Cow position:
               
chr25:21209218-21209029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
114, 161
               

               
Conread position:
               
272-470
               

               
Cow position:
               
chr25:41392933-41392737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
114, 162
               

               
Conread position:
               
272-474
               

               
Cow position:
               
chr25:6226771-6226972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
114, 183
               

               
Conread position:
               
272-474
               

               
Cow position:
               
chr25:8347239-8347437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 104
               

               
Conread position:
               
272-474
               

               
Cow position:
               
chr25:30319719-30319515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 110
               

               
Conread position:
               
272-482
               

               
Cow position:
               
chr25:31733006-31732796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 136
               

               
Conread position:
               
272-507
               

               
Cow position:
               
chr25:36761836-36762074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
197, 110
               

               
Conread position:
               
272-511
               

               
Cow position:
               
chr25:14512846-14513079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
204, 36
               

               
Conread position:
               
273-482
               

               
Cow position:
               
chr25:13642585-13642374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
94, 112
               

               
Conread position:
               
274-511
               

               
Cow position:
               
chr25:10366018-10365779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 6
               

               
Conread position:
               
275-463
               

               
Cow position:
               
chr25:20460856-20461044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
275-474
               

               
Cow position:
               
chr25:6886244-6886044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
111, 89
               

               
Conread position:
               
275-491
               

               
Cow position:
               
chr25:38981846-38982050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
201, 33
               

               
Conread position:
               
276-474
               

               
Cow position:
               
chr25:27621818-27622017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
276-482
               

               
Cow position:
               
chr25:16064631-16064826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
277-467
               

               
Cow position:
               
chr25:1837975-1838159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
279-486
               

               
Cow position:
               
chr25:12778797-12778588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
26, 156
               

               
Conread position:
               
283-463
               

               
Cow position:
               
chr25:40407728-40407553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
284-482
               

               
Cow position:
               
chr25:16001779-16001587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
27, 99
               

               
Conread position:
               
285-485
               

               
Cow position:
               
chr25:433333-433136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
290-482
               

               
Cow position:
               
chr25:36026755-36026946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
186, 97
               

               
Conread position:
               
292-480
               

               
Cow position:
               
chr25:40658050-40658235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
90, 51
               

               
Conread position:
               
292-503
               

               
Cow position:
               
chr25:20085037-20085249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
185, 90
               

               
Conread position:
               
296-511
               

               
Cow position:
               
chr25:11666410-11666619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
127, 81
               

               
Conread position:
               
301-474
               

               
Cow position:
               
chr25:12840958-12840794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
304-482
               

               
Cow position:
               
chr25:12081546-12081383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
172, 30
               

               
Conread position:
               
307-474
               

               
Cow position:
               
chr25:6256173-6256008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
116, 42
               

               
Conread position:
               
308-466
               

               
Cow position:
               
chr25:61423-61581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
115, 74
               

               
Conread position:
               
310-475
               

               
Cow position:
               
chr25:26338213-26338380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
76, 125
               

               
Conread position:
               
312-474
               

               
Cow position:
               
chr25:10218281-10218119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
316-474
               

               
Cow position:
               
chr25:25861586-25861429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
70, 120
               

               
Conread position:
               
333-482
               

               
Cow position:
               
chr25:13736520-13736371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
53, 100
               

               
Conread position:
               
338-505
               

               
Cow position:
               
chr25:13294702-13294865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
347-482
               

               
Cow position:
               
chr25:12755686-12755553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
129, 22
               

               
Conread position:
               
349-482
               

               
Cow position:
               
chr25:13672195-13672331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
353-513
               

               
Cow position:
               
chr25:18905692-18905862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
390-513
               

               
Cow position:
               
chr25:8961620-8961743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 41
               
Show alignments to all cow chromosomes.