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Cow genome map

           
Conread name:
           
rmga16_o4.y2
        

               
Conread position:
               
1-141
               

               
Cow position:
               
chr4:19265075-19265214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr4:52980621-52980780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr4:22014009-22013849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
107, 83
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr4:19237481-19237648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
110, 32
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr4:8799818-8799990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 23
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr4:67435546-67435722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr4:3268850-3268675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr4:4185582-4185753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 61
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr4:19006922-19007102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 98
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr4:19744391-19744566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr4:35940540-35940363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr4:44901679-44901855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr4:52632972-52632796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
23, 93
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr4:61651139-61650963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr4:65919080-65919255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 92
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr4:19957442-19957618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr4:67600264-67600089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
109, 94
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr4:2140916-2141091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr4:10885052-10885307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
115, 78
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr4:43898482-43898225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr4:4127094-4127347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
176, 94
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr4:13327496-13327238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 38
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr4:36892810-36893072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
31, 95
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr4:31561823-31561578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
94, 50
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr4:3070286-3070539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
173, 92
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr4:1646188-1646443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 54
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr4:8760705-8760968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
110, 92
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr4:1368357-1368099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 63
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr4:54931213-54930950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr4:10994086-10993820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
53, 12
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:213339-213597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
109, 46
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:359297-359567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:3893184-3893456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:6030352-6030609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:6210150-6210418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:6414167-6414436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:6446171-6446440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:6862790-6862521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:8377725-8377454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
78, 35
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:8414903-8414634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:9375678-9375409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:11930377-11930650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:12237834-12237565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:13979458-13979724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
109, 49
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:14142731-14142997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 107
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:14919472-14919737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:16642230-16642498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:17877372-17877642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
90, 163
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:20616303-20616030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:22841807-22842076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
110, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:26874492-26874224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
96, 141
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:28173458-28173190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:36025856-36025588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:37707740-37707471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:38152842-38152575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:49745086-49745354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:52601514-52601782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 57
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr4:64875510-64875780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:3252138-3251875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
155, 21
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:8704227-8704498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:19492974-19493247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:27287694-27287419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
86, 21
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:46370501-46370231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:65464637-65464374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
107, 92
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:65539124-65538848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
109, 52
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr4:12752236-12752508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr4:16092156-16091887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
104, 22
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr4:53822349-53822620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
78, 86
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr4:54111021-54111291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr4:33496974-33497253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr4:26323200-26323483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
108, 63
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr4:55522760-55523044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr4:37691965-37691675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr4:2601614-2601913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr4:50760666-50760360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 61
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr4:32249906-32250208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr4:59870945-59871265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 103
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr4:13143064-13142755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr4:33357323-33357665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
109, 71
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr4:30170940-30170588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr4:1027811-1027467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
109, 70
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr4:22366587-22366934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr4:38706497-38706145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr4:1499680-1499323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr4:17375993-17375635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
98, 61
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr4:34223349-34223744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr4:54170830-54171228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 40
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr4:48410091-48409689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 38
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr4:43884505-43884910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
78, 41
               

               
Conread position:
               
1-426
               

               
Cow position:
               
chr4:19255779-19256196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 176
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr4:16859306-16858883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
109, 43
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr4:49408937-49409348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
21, 7
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr4:33372354-33371929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr4:57239909-57240332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
173, 38
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr4:57988158-57988563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr4:3354531-3354103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr4:54757849-54757433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
180, 93
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr4:61242683-61243102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr4:37786716-37787150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 76
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr4:20644040-20644462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr4:5441246-5440809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr4:50019132-50018695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
173, 254
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr4:44450127-44449687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 28
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr4:10136001-10136437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr4:23303854-23303410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr4:55271299-55270858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr4:67652021-67651572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr4:10044354-10043906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr4:12018019-12018462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
108, 28
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr4:16364736-16365184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 99
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr4:21553721-21553278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr4:29035376-29035818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
108, 51
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr4:33069427-33068980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr4:39422010-39422458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr4:44734031-44734480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 269
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr4:33366768-33366325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
108, 18
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr4:15462850-15462370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr4:2680839-2681265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr4:34172112-34171657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr4:14152538-14153000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 76
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr4:65826411-65825937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr4:20243596-20244051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr4:63430886-63431350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr4:22073845-22073394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr4:31535230-31535699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:5610612-5610148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:5882890-5883361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:7250106-7249646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 13
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:8413653-8413195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 93
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:11201277-11201742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:15904570-15905021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:18738329-18737858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:20298690-20299196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:21589148-21588677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 8
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:22237016-22236557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 46
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:27178238-27178708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:37553587-37553116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:37703723-37704189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:42672627-42673097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 272
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:44051690-44052157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:45644850-45644385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 46
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:46743832-46743362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
109, 68
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:47264192-47264663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:54190564-54191011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr4:68944717-68944248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr4:6653204-6653661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr4:17473890-17474370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 41
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr4:27337625-27338101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr4:29312394-29312870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr4:30690204-30690653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 43
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr4:47730331-47730787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr4:53545499-53545960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr4:61816989-61816507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr4:21392360-21391878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 171
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr4:24002509-24002035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr4:56233149-56233620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr4:25878855-25879340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr4:36899791-36900278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
98, 263
               

               
Conread position:
               
1-500
               

               
Cow position:
               
chr4:23853656-23854147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr4:18255321-18255806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr4:46526458-46526950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
108, 13
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr4:17833434-17832946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 94
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr4:12589008-12589521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr4:2190883-2190382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr4:48030270-48030779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
21, 276
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr4:27540078-27540581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr4:40415191-40414663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr4:43896085-43895569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-512
               

               
Cow position:
               
chr4:39009423-39009934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr4:8068292-8068472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr4:18845206-18845380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr4:47752709-47752877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr4:30004595-30004342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
108, 206
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr4:32770489-32770231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr4:6457328-6457053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr4:8674143-8674412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr4:23150243-23149975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr4:43316240-43315972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr4:43840564-43840298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr4:61673566-61673299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
108, 58
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr4:9649480-9649754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
2-258
               

               
Cow position:
               
chr4:25579535-25579810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
108, 60
               

               
Conread position:
               
2-258
               

               
Cow position:
               
chr4:65891475-65891722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
2-261
               

               
Cow position:
               
chr4:2349336-2349061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr4:52086568-52086845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
52, 12
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr4:9845064-9845359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
107, 72
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr4:58948515-58948196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
2-288
               

               
Cow position:
               
chr4:23508738-23509039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr4:27560508-27560838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
2-350
               

               
Cow position:
               
chr4:17775131-17774789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
2-371
               

               
Cow position:
               
chr4:18108259-18108620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
108, 60
               

               
Conread position:
               
2-371
               

               
Cow position:
               
chr4:19502339-19501976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 91
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr4:34044307-34043897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
2-404
               

               
Cow position:
               
chr4:61450239-61450624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 12
               

               
Conread position:
               
2-412
               

               
Cow position:
               
chr4:37878885-37879308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr4:8120707-8120294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
2-429
               

               
Cow position:
               
chr4:10553654-10554086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 272
               

               
Conread position:
               
2-429
               

               
Cow position:
               
chr4:17330774-17330346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
2-431
               

               
Cow position:
               
chr4:67042386-67042848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
91, 12
               

               
Conread position:
               
2-442
               

               
Cow position:
               
chr4:2609697-2610126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 91
               

               
Conread position:
               
2-444
               

               
Cow position:
               
chr4:11390126-11389641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
2-444
               

               
Cow position:
               
chr4:24414703-24415186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 247
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chr4:9519755-9520202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 147
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chr4:25596072-25595628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-451
               

               
Cow position:
               
chr4:34713231-34713675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-462
               

               
Cow position:
               
chr4:21064509-21064947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-467
               

               
Cow position:
               
chr4:14353225-14352755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 269
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr4:14471110-14470652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-471
               

               
Cow position:
               
chr4:46709067-46708603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
2-473
               

               
Cow position:
               
chr4:43370398-43369930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 6
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr4:2263295-2262827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 82
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr4:13589553-13590011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr4:14230168-14229694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
107, 91
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr4:14742725-14743185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr4:14813983-14814452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
108, 213
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr4:18602799-18602332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr4:27546217-27546689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
108, 267
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr4:31348754-31348266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr4:48411494-48411024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr4:51898458-51898930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 94
               

               
Conread position:
               
2-475
               

               
Cow position:
               
chr4:31136212-31136675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
2-482
               

               
Cow position:
               
chr4:29805928-29805436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
2-484
               

               
Cow position:
               
chr4:27292495-27292021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 7
               

               
Conread position:
               
2-486
               

               
Cow position:
               
chr4:36755175-36755682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-488
               

               
Cow position:
               
chr4:11309061-11309564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr4:66112615-66112131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 58
               

               
Conread position:
               
2-501
               

               
Cow position:
               
chr4:49794140-49794625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 91
               

               
Conread position:
               
2-513
               

               
Cow position:
               
chr4:44839425-44838924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 58
               

               
Conread position:
               
2-513
               

               
Cow position:
               
chr4:47774175-47773671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chr4:45499571-45499736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr4:63096691-63096939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr4:11218279-11218534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
106, 90
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr4:52178089-52177825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
107, 90
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr4:37169355-37169087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr4:40410893-40410629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr4:21844549-21844983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 13
               

               
Conread position:
               
3-482
               

               
Cow position:
               
chr4:6034631-6034154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 90
               

               
Conread position:
               
3-482
               

               
Cow position:
               
chr4:23647372-23646914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 62
               

               
Conread position:
               
3-512
               

               
Cow position:
               
chr4:24372395-24371890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 133
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr4:35260969-35260798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
106, 31
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr4:10017119-10016857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
96, 257
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr4:12558021-12557763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
93, 166
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr4:35929887-35930155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
106, 89
               

               
Conread position:
               
4-263
               

               
Cow position:
               
chr4:38181151-38181428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr4:42638901-42638608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
106, 80
               

               
Conread position:
               
4-413
               

               
Cow position:
               
chr4:33020226-33019818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
106, 89
               

               
Conread position:
               
4-451
               

               
Cow position:
               
chr4:46711190-46710744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
106, 96
               

               
Conread position:
               
4-467
               

               
Cow position:
               
chr4:12560477-12560946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 94
               

               
Conread position:
               
4-467
               

               
Cow position:
               
chr4:28835991-28836451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 89
               

               
Conread position:
               
4-474
               

               
Cow position:
               
chr4:10036874-10037337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 89
               

               
Conread position:
               
4-474
               

               
Cow position:
               
chr4:30573917-30574374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 18
               

               
Conread position:
               
4-501
               

               
Cow position:
               
chr4:9795900-9795422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 42
               

               
Conread position:
               
4-502
               

               
Cow position:
               
chr4:61973006-61972502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
4-511
               

               
Cow position:
               
chr4:22743800-22744287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 21
               

               
Conread position:
               
4-512
               

               
Cow position:
               
chr4:22052008-22051506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 66
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr4:60124317-60124052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
105, 88
               

               
Conread position:
               
5-425
               

               
Cow position:
               
chr4:19420797-19421210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
5-473
               

               
Cow position:
               
chr4:46456608-46456138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 67
               

               
Conread position:
               
6-258
               

               
Cow position:
               
chr4:8558895-8558635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
104, 75
               

               
Conread position:
               
6-280
               

               
Cow position:
               
chr4:67407951-67408244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
6-474
               

               
Cow position:
               
chr4:51740274-51739786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
6-484
               

               
Cow position:
               
chr4:10992746-10992263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
104, 87
               

               
Conread position:
               
7-174
               

               
Cow position:
               
chr4:58484830-58485002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
7-254
               

               
Cow position:
               
chr4:8890461-8890198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 86
               

               
Conread position:
               
7-473
               

               
Cow position:
               
chr4:19558185-19558641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 86
               

               
Conread position:
               
7-474
               

               
Cow position:
               
chr4:61391735-61391281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 49
               

               
Conread position:
               
8-281
               

               
Cow position:
               
chr4:49814550-49814263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
102, 85
               

               
Conread position:
               
8-283
               

               
Cow position:
               
chr4:44612431-44612705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
11, 17
               

               
Conread position:
               
8-417
               

               
Cow position:
               
chr4:50193958-50194358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 86
               

               
Conread position:
               
9-258
               

               
Cow position:
               
chr4:1356042-1355785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 35
               

               
Conread position:
               
9-421
               

               
Cow position:
               
chr4:26008912-26009322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 11
               

               
Conread position:
               
9-449
               

               
Cow position:
               
chr4:20140061-20139627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 84
               

               
Conread position:
               
9-471
               

               
Cow position:
               
chr4:51850664-51851126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 54
               

               
Conread position:
               
10-474
               

               
Cow position:
               
chr4:28613286-28613747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
11-421
               

               
Cow position:
               
chr4:49698057-49698475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
11-474
               

               
Cow position:
               
chr4:46668050-46668490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
14-251
               

               
Cow position:
               
chr4:22101794-22101544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
96, 79
               

               
Conread position:
               
14-371
               

               
Cow position:
               
chr4:41186897-41186543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 246
               

               
Conread position:
               
15-258
               

               
Cow position:
               
chr4:30973818-30974067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 77
               

               
Conread position:
               
16-474
               

               
Cow position:
               
chr4:11872441-11871985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
17-409
               

               
Cow position:
               
chr4:38067363-38067747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 75
               

               
Conread position:
               
17-474
               

               
Cow position:
               
chr4:19434732-19435182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 77
               

               
Conread position:
               
18-447
               

               
Cow position:
               
chr4:12464322-12464744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 75
               

               
Conread position:
               
19-501
               

               
Cow position:
               
chr4:11091205-11090741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 74
               

               
Conread position:
               
21-253
               

               
Cow position:
               
chr4:51002632-51002877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
21-474
               

               
Cow position:
               
chr4:25806376-25806824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 186
               

               
Conread position:
               
22-251
               

               
Cow position:
               
chr4:53832529-53832774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
83, 53
               

               
Conread position:
               
22-294
               

               
Cow position:
               
chr4:41866700-41866976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
100, 40
               

               
Conread position:
               
22-491
               

               
Cow position:
               
chr4:23526157-23526637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 260
               

               
Conread position:
               
23-482
               

               
Cow position:
               
chr4:41441045-41441501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 33
               

               
Conread position:
               
24-174
               

               
Cow position:
               
chr4:570078-570229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
24-467
               

               
Cow position:
               
chr4:56409646-56410104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 261
               

               
Conread position:
               
26-428
               

               
Cow position:
               
chr4:48499307-48499719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 66
               

               
Conread position:
               
26-447
               

               
Cow position:
               
chr4:29529380-29528960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
68, 245
               

               
Conread position:
               
26-474
               

               
Cow position:
               
chr4:53829914-53830360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 67
               

               
Conread position:
               
27-474
               

               
Cow position:
               
chr4:67394683-67395128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
28-462
               

               
Cow position:
               
chr4:1404524-1404958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 65
               

               
Conread position:
               
28-473
               

               
Cow position:
               
chr4:34209525-34209953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
33-258
               

               
Cow position:
               
chr4:44073317-44073082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
121, 63
               

               
Conread position:
               
35-291
               

               
Cow position:
               
chr4:61898042-61897767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
38-254
               

               
Cow position:
               
chr4:59643073-59643304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
71, 55
               

               
Conread position:
               
40-394
               

               
Cow position:
               
chr4:33090257-33089896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
41-412
               

               
Cow position:
               
chr4:47047238-47047611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 52
               

               
Conread position:
               
43-293
               

               
Cow position:
               
chr4:5631788-5631527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
46-474
               

               
Cow position:
               
chr4:19584199-19584640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 149
               

               
Conread position:
               
47-474
               

               
Cow position:
               
chr4:63349981-63349552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 63
               

               
Conread position:
               
48-482
               

               
Cow position:
               
chr4:57555463-57555903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 45
               

               
Conread position:
               
53-474
               

               
Cow position:
               
chr4:24119406-24118984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 220
               

               
Conread position:
               
56-470
               

               
Cow position:
               
chr4:38998945-38999342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 37
               

               
Conread position:
               
62-248
               

               
Cow position:
               
chr4:4672814-4672613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
63-432
               

               
Cow position:
               
chr4:7258907-7258540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
64-432
               

               
Cow position:
               
chr4:29710529-29710150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
64-447
               

               
Cow position:
               
chr4:57146806-57147218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 29
               

               
Conread position:
               
64-474
               

               
Cow position:
               
chr4:51903122-51903527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
64-501
               

               
Cow position:
               
chr4:26163450-26163021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 22
               

               
Conread position:
               
65-482
               

               
Cow position:
               
chr4:57931422-57931845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
65-511
               

               
Cow position:
               
chr4:26400478-26400925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
69-442
               

               
Cow position:
               
chr4:55508892-55508523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 23
               

               
Conread position:
               
69-474
               

               
Cow position:
               
chr4:53999995-53999586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
74-274
               

               
Cow position:
               
chr4:46529500-46529285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
74-434
               

               
Cow position:
               
chr4:27997213-27997574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
76-510
               

               
Cow position:
               
chr4:16736032-16736467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 133
               

               
Conread position:
               
86-461
               

               
Cow position:
               
chr4:19437987-19438370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 181
               

               
Conread position:
               
90-512
               

               
Cow position:
               
chr4:52748907-52748489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 106
               

               
Conread position:
               
92-445
               

               
Cow position:
               
chr4:5623647-5623299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
96-482
               

               
Cow position:
               
chr4:34383797-34383412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 177
               

               
Conread position:
               
106-421
               

               
Cow position:
               
chr4:3275005-3274663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
41, 301
               

               
Conread position:
               
107-474
               

               
Cow position:
               
chr4:14964316-14964700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
59, 251
               

               
Conread position:
               
115-283
               

               
Cow position:
               
chr4:26746006-26746189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 148
               

               
Conread position:
               
117-449
               

               
Cow position:
               
chr4:21257551-21257227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 69
               

               
Conread position:
               
117-484
               

               
Cow position:
               
chr4:1014645-1015003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
132-467
               

               
Cow position:
               
chr4:3283881-3283532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 286
               

               
Conread position:
               
133-482
               

               
Cow position:
               
chr4:12591618-12591279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
147-434
               

               
Cow position:
               
chr4:52225591-52225900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
156-482
               

               
Cow position:
               
chr4:19313601-19313943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 87
               

               
Conread position:
               
173-474
               

               
Cow position:
               
chr4:44956560-44956262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
15, 85
               

               
Conread position:
               
190-428
               

               
Cow position:
               
chr4:24187975-24187734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
95, 69
               

               
Conread position:
               
195-413
               

               
Cow position:
               
chr4:58577618-58577419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
195-440
               

               
Cow position:
               
chr4:12700687-12700452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
209, 58
               

               
Conread position:
               
195-467
               

               
Cow position:
               
chr4:65731260-65731002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
195-474
               

               
Cow position:
               
chr4:52167198-52166930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
195-484
               

               
Cow position:
               
chr4:58512910-58512625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 62
               

               
Conread position:
               
195-503
               

               
Cow position:
               
chr4:49629150-49629440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
270, 63
               

               
Conread position:
               
196-506
               

               
Cow position:
               
chr4:13832952-13832647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 54
               

               
Conread position:
               
198-414
               

               
Cow position:
               
chr4:28568914-28568688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
199-429
               

               
Cow position:
               
chr4:62618176-62618401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
187, 54
               

               
Conread position:
               
203-512
               

               
Cow position:
               
chr4:4321359-4321031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
212-509
               

               
Cow position:
               
chr4:47348487-47348793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 135
               

               
Conread position:
               
227-482
               

               
Cow position:
               
chr4:36724714-36724970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
29, 158
               

               
Conread position:
               
233-444
               

               
Cow position:
               
chr4:46385887-46385679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 20
               

               
Conread position:
               
240-473
               

               
Cow position:
               
chr4:41867136-41867366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
252-473
               

               
Cow position:
               
chr4:45589881-45589677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
252-482
               

               
Cow position:
               
chr4:46274899-46275124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 20
               

               
Conread position:
               
254-474
               

               
Cow position:
               
chr4:65891698-65891915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
257-474
               

               
Cow position:
               
chr4:480296-480082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
257-503
               

               
Cow position:
               
chr4:28173086-28172848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
257-506
               

               
Cow position:
               
chr4:620443-620197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
257-511
               

               
Cow position:
               
chr4:509187-508938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
228, 15
               

               
Conread position:
               
261-480
               

               
Cow position:
               
chr4:14513527-14513308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
125, 173
               

               
Conread position:
               
261-513
               

               
Cow position:
               
chr4:52632255-52631999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
158, 22
               

               
Conread position:
               
267-447
               

               
Cow position:
               
chr4:40576196-40576023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
269-467
               

               
Cow position:
               
chr4:12676535-12676721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
272-461
               

               
Cow position:
               
chr4:33910032-33910211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
272-473
               

               
Cow position:
               
chr4:56570530-56570729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
116, 36
               

               
Conread position:
               
272-474
               

               
Cow position:
               
chr4:18095951-18095747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
272-474
               

               
Cow position:
               
chr4:46176739-46176536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
42, 163
               

               
Conread position:
               
272-482
               

               
Cow position:
               
chr4:19561420-19561616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
204, 22
               

               
Conread position:
               
272-482
               

               
Cow position:
               
chr4:45662775-45662577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 96
               

               
Conread position:
               
272-482
               

               
Cow position:
               
chr4:48137639-48137842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
108, 18
               

               
Conread position:
               
272-482
               

               
Cow position:
               
chr4:54501724-54501517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 114
               

               
Conread position:
               
272-482
               

               
Cow position:
               
chr4:60897548-60897344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
204, 110
               

               
Conread position:
               
272-501
               

               
Cow position:
               
chr4:43543009-43542778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
38, 180
               

               
Conread position:
               
273-482
               

               
Cow position:
               
chr4:30974063-30974272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
113, 35
               

               
Conread position:
               
273-482
               

               
Cow position:
               
chr4:42267016-42266822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
273-501
               

               
Cow position:
               
chr4:10968658-10968433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
192, 10
               

               
Conread position:
               
274-474
               

               
Cow position:
               
chr4:33421634-33421436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
142, 34
               

               
Conread position:
               
274-510
               

               
Cow position:
               
chr4:19237966-19238201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
194, 110
               

               
Conread position:
               
275-474
               

               
Cow position:
               
chr4:19582888-19582694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
30, 89
               

               
Conread position:
               
275-474
               

               
Cow position:
               
chr4:21064276-21064082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
276-474
               

               
Cow position:
               
chr4:19597584-19597393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
277-474
               

               
Cow position:
               
chr4:23561105-23561304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
277-482
               

               
Cow position:
               
chr4:37342847-37343046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
146, 107
               

               
Conread position:
               
277-502
               

               
Cow position:
               
chr4:65650395-65650170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
87, 95
               

               
Conread position:
               
278-473
               

               
Cow position:
               
chr4:31004672-31004485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
279-474
               

               
Cow position:
               
chr4:46591394-46591588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 29
               

               
Conread position:
               
280-482
               

               
Cow position:
               
chr4:54667958-54667757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 119
               

               
Conread position:
               
282-460
               

               
Cow position:
               
chr4:37691573-37691400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
141, 87
               

               
Conread position:
               
283-466
               

               
Cow position:
               
chr4:32725960-32726141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
283-467
               

               
Cow position:
               
chr4:19708678-19708860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
140, 9
               

               
Conread position:
               
283-474
               

               
Cow position:
               
chr4:19699835-19700029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 153
               

               
Conread position:
               
283-474
               

               
Cow position:
               
chr4:23847315-23847125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
114, 149
               

               
Conread position:
               
283-474
               

               
Cow position:
               
chr4:46597119-46597301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
140, 25
               

               
Conread position:
               
283-476
               

               
Cow position:
               
chr4:55395504-55395685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
283-480
               

               
Cow position:
               
chr4:35981725-35981921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 150
               

               
Conread position:
               
283-482
               

               
Cow position:
               
chr4:44612739-44612936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 25
               

               
Conread position:
               
284-482
               

               
Cow position:
               
chr4:961926-961731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
169, 57
               

               
Conread position:
               
284-485
               

               
Cow position:
               
chr4:23445314-23445115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 24
               

               
Conread position:
               
286-467
               

               
Cow position:
               
chr4:34310716-34310534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 148
               

               
Conread position:
               
286-474
               

               
Cow position:
               
chr4:64072614-64072426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 22
               

               
Conread position:
               
287-471
               

               
Cow position:
               
chr4:13141472-13141288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 13
               

               
Conread position:
               
289-482
               

               
Cow position:
               
chr4:45583386-45583187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
290-474
               

               
Cow position:
               
chr4:33357674-33357857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
290-482
               

               
Cow position:
               
chr4:36893096-36893289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
96, 143
               

               
Conread position:
               
290-482
               

               
Cow position:
               
chr4:59008626-59008439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
290-504
               

               
Cow position:
               
chr4:50203490-50203713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
291-474
               

               
Cow position:
               
chr4:19322335-19322159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
291-474
               

               
Cow position:
               
chr4:20157669-20157494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
292-501
               

               
Cow position:
               
chr4:24688604-24688391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
92, 204
               

               
Conread position:
               
295-462
               

               
Cow position:
               
chr4:33062657-33062824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 139
               

               
Conread position:
               
295-482
               

               
Cow position:
               
chr4:68764265-68764453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
128, 43
               

               
Conread position:
               
298-482
               

               
Cow position:
               
chr4:14919749-14919926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 69
               

               
Conread position:
               
298-489
               

               
Cow position:
               
chr4:58881215-58881024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
88, 12
               

               
Conread position:
               
300-474
               

               
Cow position:
               
chr4:21233118-21232951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
302-474
               

               
Cow position:
               
chr4:46370565-46370738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
81, 134
               

               
Conread position:
               
308-474
               

               
Cow position:
               
chr4:11004955-11004797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
115, 12
               

               
Conread position:
               
308-480
               

               
Cow position:
               
chr4:12127882-12127706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
115, 89
               

               
Conread position:
               
310-474
               

               
Cow position:
               
chr4:23911826-23911660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
313-474
               

               
Cow position:
               
chr4:2601995-2602155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
8, 85
               

               
Conread position:
               
313-474
               

               
Cow position:
               
chr4:41908026-41907869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
315-482
               

               
Cow position:
               
chr4:43750044-43749876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
71, 118
               

               
Conread position:
               
316-484
               

               
Cow position:
               
chr4:46501123-46501284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
102, 66
               

               
Conread position:
               
319-513
               

               
Cow position:
               
chr4:10016830-10016631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
57, 118
               

               
Conread position:
               
324-513
               

               
Cow position:
               
chr4:19548773-19548959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
106, 58
               

               
Conread position:
               
330-513
               

               
Cow position:
               
chr4:38935141-38935320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
146, 44
               

               
Conread position:
               
333-482
               

               
Cow position:
               
chr4:43740307-43740456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 51
               

               
Conread position:
               
334-474
               

               
Cow position:
               
chr4:31506243-31506109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
335-482
               

               
Cow position:
               
chr4:13941246-13941394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
336-503
               

               
Cow position:
               
chr4:48321817-48321982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
140, 38
               

               
Conread position:
               
337-474
               

               
Cow position:
               
chr4:66118737-66118600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 45
               

               
Conread position:
               
342-513
               

               
Cow position:
               
chr4:30791759-30791935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
343-511
               

               
Cow position:
               
chr4:28543805-28543640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 40
               

               
Conread position:
               
345-474
               

               
Cow position:
               
chr4:29106697-29106829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
355-513
               

               
Cow position:
               
chr4:33869468-33869627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
58, 27
               
Show alignments to all cow chromosomes.