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Cow genome map

           
Conread name:
           
rmga16_o4.y2
        

               
Conread position:
               
1-108
               

               
Cow position:
               
chr9:55620697-55620590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 94
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr9:46670503-46670664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 35
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr9:58252124-58251960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr9:3060771-3060940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr9:3311869-3312041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr9:48794713-48794540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr9:34742064-34742236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
109, 35
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr9:51692019-51691850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr9:5327783-5327609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 38
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr9:18243400-18243224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr9:18506246-18506070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr9:40142777-40142601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr9:18215286-18215478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
107, 71
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr9:18252365-18252624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr9:2707898-2707637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr9:19155702-19155437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr9:20816406-20816140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr9:21840701-21840453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr9:22656381-22656647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr9:3756265-3755996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr9:10326816-10327086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr9:11057344-11057076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
115, 57
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr9:11477677-11477406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
65, 93
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr9:17905193-17905463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr9:21412884-21413153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr9:23343160-23342881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr9:34238172-34237904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr9:37173822-37173553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr9:40326985-40327254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr9:42357620-42357351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr9:50519851-50519577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 24
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr9:50694792-50695061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr9:62729778-62730046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr9:7159274-7159539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr9:26478120-26477847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 46
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr9:5400328-5400057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr9:55983162-55983437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
93, 231
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr9:3053673-3053941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
173, 105
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr9:12259676-12259400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr9:29361873-29362148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr9:33067782-33067507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr9:34059050-34058778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
115, 21
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr9:61739472-61739208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
78, 98
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr9:7006322-7006597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
99, 142
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr9:44821740-44822015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 92
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr9:23540879-23541155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr9:4929185-4928913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr9:22803079-22802795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr9:28657198-28656916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr9:23005014-23004746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
107, 92
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr9:17871240-17871543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
109, 61
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr9:44914549-44914848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 92
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr9:8525623-8525269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
1-371
               

               
Cow position:
               
chr9:9817459-9817102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr9:49292526-49292936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 21
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr9:5524754-5524350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr9:54413048-54412637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr9:42570798-42571211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr9:14591724-14592143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr9:3997190-3996762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr9:5628401-5628826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
94, 262
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr9:874236-874664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
1-429
               

               
Cow position:
               
chr9:29106611-29107039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
92, 269
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr9:48017257-48017682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 94
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr9:34696731-34697158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr9:31115265-31115682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr9:62075381-62075832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
1-440
               

               
Cow position:
               
chr9:19079435-19079880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr9:8387695-8388135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-447
               

               
Cow position:
               
chr9:6253147-6253589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
98, 140
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr9:1990971-1990520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
107, 81
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr9:27781329-27780881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr9:32238948-32238502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr9:37158029-37157582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr9:59479275-59478811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr9:47882703-47882254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
104, 268
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr9:7058472-7058018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr9:37017449-37016995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr9:49982540-49982992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr9:58674320-58673846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 85
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr9:24726114-24726570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr9:9443033-9443490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 93
               

               
Conread position:
               
1-466
               

               
Cow position:
               
chr9:23388112-23388571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 94
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr9:9016655-9017118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
109, 34
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr9:31077107-31077575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 98
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr9:52407727-52407272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr9:53607829-53608289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr9:9558544-9558081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr9:1070701-1070232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr9:38960871-38961335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:648340-647875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:2548112-2547646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:2676467-2675992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 65
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:6887161-6887636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
110, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:9402601-9403077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:10566781-10566305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:10857614-10858070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
109, 46
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:11299126-11299592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:11312950-11313413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:12285124-12284653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
109, 99
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:17579880-17579409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:19539660-19539188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:20393565-20394020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:22617182-22616723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 7
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:22623568-22623097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:24917706-24917238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
99, 207
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:27038695-27039166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
21, 93
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:30162761-30162257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
109, 93
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:30187288-30187754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:32812899-32812443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:32972948-32973413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:41146002-41145531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:46627893-46628364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:50900067-50899598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:54473699-54473219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr9:64017635-64017150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr9:46316224-46316686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr9:5161508-5161975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 12
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr9:8235828-8236308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr9:9567116-9566640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
107, 92
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr9:15843001-15843478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr9:28726165-28726631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr9:29184573-29185042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 92
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr9:30401853-30402330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 13
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr9:32236824-32236347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr9:56301011-56300537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
109, 13
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr9:16300006-16300477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 28
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chr9:1855840-1855351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 59
               

               
Conread position:
               
1-490
               

               
Cow position:
               
chr9:15805360-15805846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr9:8998907-8998436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 92
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr9:17309970-17310483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 78
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr9:28025403-28025894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
99, 278
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr9:34000048-34000542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr9:26577294-26577782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr9:17740383-17740879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr9:34689024-34689533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 92
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr9:15982517-15983026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr9:22439949-22440448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 55
               

               
Conread position:
               
1-510
               

               
Cow position:
               
chr9:59539588-59540091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
117, 13
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr9:19546101-19546605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr9:1983941-1984474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr9:6764188-6763667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr9:9491350-9490846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 18
               

               
Conread position:
               
1-513
               

               
Cow position:
               
chr9:22361578-22361069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 92
               

               
Conread position:
               
2-166
               

               
Cow position:
               
chr9:55341734-55341902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 93
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr9:34957278-34957446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
2-174
               

               
Cow position:
               
chr9:63555928-63555753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr9:13493619-13493873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
2-251
               

               
Cow position:
               
chr9:9260691-9260426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
91, 263
               

               
Conread position:
               
2-252
               

               
Cow position:
               
chr9:48773894-48773622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr9:5886815-5886545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr9:17410625-17410893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
107, 91
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr9:20407193-20406932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr9:38634363-38634629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr9:43302020-43301755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr9:44269141-44268874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr9:61846120-61846380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 60
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr9:10143869-10144141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
46, 92
               

               
Conread position:
               
2-258
               

               
Cow position:
               
chr9:34945441-34945163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr9:3932528-3932251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
2-262
               

               
Cow position:
               
chr9:28017242-28016966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
108, 17
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr9:37098368-37098650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
2-268
               

               
Cow position:
               
chr9:42172301-42172578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr9:25238832-25238543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
107, 91
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr9:11286317-11286014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 11
               

               
Conread position:
               
2-391
               

               
Cow position:
               
chr9:64105557-64105145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
2-396
               

               
Cow position:
               
chr9:34523785-34523392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
2-399
               

               
Cow position:
               
chr9:52753637-52753247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-400
               

               
Cow position:
               
chr9:41999696-42000088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
114, 91
               

               
Conread position:
               
2-405
               

               
Cow position:
               
chr9:17296522-17296118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
85, 184
               

               
Conread position:
               
2-411
               

               
Cow position:
               
chr9:62668969-62668558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 92
               

               
Conread position:
               
2-413
               

               
Cow position:
               
chr9:19266585-19267006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 22
               

               
Conread position:
               
2-431
               

               
Cow position:
               
chr9:51929260-51928836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
2-439
               

               
Cow position:
               
chr9:371649-371204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
2-444
               

               
Cow position:
               
chr9:44518125-44517687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
107, 92
               

               
Conread position:
               
2-445
               

               
Cow position:
               
chr9:8778635-8779112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
2-445
               

               
Cow position:
               
chr9:38032570-38033019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
100, 12
               

               
Conread position:
               
2-465
               

               
Cow position:
               
chr9:2717897-2718356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
2-467
               

               
Cow position:
               
chr9:5839559-5839093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr9:9723320-9723785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr9:39971598-39971143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
2-478
               

               
Cow position:
               
chr9:54997479-54997932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 91
               

               
Conread position:
               
2-482
               

               
Cow position:
               
chr9:29330092-29330553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
47, 91
               

               
Conread position:
               
2-482
               

               
Cow position:
               
chr9:64049997-64050471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-491
               

               
Cow position:
               
chr9:1520165-1520658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 92
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr9:1997695-1997220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 261
               

               
Conread position:
               
2-500
               

               
Cow position:
               
chr9:47263617-47264147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-504
               

               
Cow position:
               
chr9:43038076-43037545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 105
               

               
Conread position:
               
2-510
               

               
Cow position:
               
chr9:24996935-24997465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 91
               

               
Conread position:
               
2-511
               

               
Cow position:
               
chr9:25959019-25958474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-512
               

               
Cow position:
               
chr9:39681922-39681391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-513
               

               
Cow position:
               
chr9:6089667-6089143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 91
               

               
Conread position:
               
2-513
               

               
Cow position:
               
chr9:16218084-16218595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 94
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:40316707-40316973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr9:60590367-60590636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr9:33100591-33100851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
107, 205
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr9:9780360-9780031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
3-440
               

               
Cow position:
               
chr9:20901574-20902011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
3-440
               

               
Cow position:
               
chr9:21462276-21462720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 22
               

               
Conread position:
               
3-444
               

               
Cow position:
               
chr9:9200160-9200600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 91
               

               
Conread position:
               
3-474
               

               
Cow position:
               
chr9:8600927-8600427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 167
               

               
Conread position:
               
3-474
               

               
Cow position:
               
chr9:35904191-35904647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 59
               

               
Conread position:
               
3-475
               

               
Cow position:
               
chr9:20988876-20989360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
3-482
               

               
Cow position:
               
chr9:20900552-20901034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 90
               

               
Conread position:
               
4-170
               

               
Cow position:
               
chr9:18072066-18072232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
106, 68
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr9:5345825-5345653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
106, 89
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr9:59161522-59161256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
106, 89
               

               
Conread position:
               
4-260
               

               
Cow position:
               
chr9:13472006-13471737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
172, 89
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr9:8908987-8908711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
106, 90
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr9:29338474-29338748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
106, 89
               

               
Conread position:
               
4-339
               

               
Cow position:
               
chr9:35129386-35129053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
4-429
               

               
Cow position:
               
chr9:51178067-51177643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
106, 89
               

               
Conread position:
               
4-474
               

               
Cow position:
               
chr9:35203463-35202978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 89
               

               
Conread position:
               
4-480
               

               
Cow position:
               
chr9:21459600-21460059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 92
               

               
Conread position:
               
4-507
               

               
Cow position:
               
chr9:59454313-59453815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
106, 89
               

               
Conread position:
               
4-510
               

               
Cow position:
               
chr9:1950475-1949973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
4-512
               

               
Cow position:
               
chr9:30138717-30138184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 275
               

               
Conread position:
               
4-513
               

               
Cow position:
               
chr9:5269118-5268608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 31
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr9:50689481-50689906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
106, 22
               

               
Conread position:
               
6-245
               

               
Cow position:
               
chr9:56293908-56293665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
6-451
               

               
Cow position:
               
chr9:22755350-22754908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
6-467
               

               
Cow position:
               
chr9:28773678-28773227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 222
               

               
Conread position:
               
7-260
               

               
Cow position:
               
chr9:26115293-26115560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
103, 86
               

               
Conread position:
               
7-473
               

               
Cow position:
               
chr9:4859109-4858638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
7-474
               

               
Cow position:
               
chr9:38183920-38184386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
7-482
               

               
Cow position:
               
chr9:62442849-62442380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
102, 79
               

               
Conread position:
               
8-389
               

               
Cow position:
               
chr9:33669284-33668887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 86
               

               
Conread position:
               
9-174
               

               
Cow position:
               
chr9:24887816-24887649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
9-254
               

               
Cow position:
               
chr9:29149340-29149096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
101, 17
               

               
Conread position:
               
9-460
               

               
Cow position:
               
chr9:45284986-45285417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
19, 223
               

               
Conread position:
               
10-235
               

               
Cow position:
               
chr9:52001514-52001286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 82
               

               
Conread position:
               
10-451
               

               
Cow position:
               
chr9:4977108-4976668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
86, 260
               

               
Conread position:
               
10-463
               

               
Cow position:
               
chr9:47499645-47500100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 12
               

               
Conread position:
               
10-474
               

               
Cow position:
               
chr9:25597172-25597642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 83
               

               
Conread position:
               
11-494
               

               
Cow position:
               
chr9:55534054-55534539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 259
               

               
Conread position:
               
12-482
               

               
Cow position:
               
chr9:55074584-55075044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 29
               

               
Conread position:
               
14-251
               

               
Cow position:
               
chr9:44500292-44500544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
96, 63
               

               
Conread position:
               
14-510
               

               
Cow position:
               
chr9:28948411-28947913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 198
               

               
Conread position:
               
14-513
               

               
Cow position:
               
chr9:5501390-5500909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 8
               

               
Conread position:
               
15-174
               

               
Cow position:
               
chr9:49689476-49689315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 81
               

               
Conread position:
               
15-444
               

               
Cow position:
               
chr9:37510563-37510142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 78
               

               
Conread position:
               
16-473
               

               
Cow position:
               
chr9:29007117-29006662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 78
               

               
Conread position:
               
18-474
               

               
Cow position:
               
chr9:28746978-28747424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 74
               

               
Conread position:
               
21-462
               

               
Cow position:
               
chr9:53110065-53109642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
6, 35
               

               
Conread position:
               
21-512
               

               
Cow position:
               
chr9:44466808-44467298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 86
               

               
Conread position:
               
22-436
               

               
Cow position:
               
chr9:1846470-1846880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 156
               

               
Conread position:
               
22-482
               

               
Cow position:
               
chr9:7410323-7409868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 71
               

               
Conread position:
               
23-262
               

               
Cow position:
               
chr9:4631011-4630770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
87, 28
               

               
Conread position:
               
24-168
               

               
Cow position:
               
chr9:13671972-13671833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
24-461
               

               
Cow position:
               
chr9:64344479-64344903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 239
               

               
Conread position:
               
25-440
               

               
Cow position:
               
chr9:6952626-6952223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
25-467
               

               
Cow position:
               
chr9:55425440-55425875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
86, 68
               

               
Conread position:
               
25-474
               

               
Cow position:
               
chr9:13221357-13221795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
85, 68
               

               
Conread position:
               
26-263
               

               
Cow position:
               
chr9:30722466-30722218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
26-434
               

               
Cow position:
               
chr9:31777110-31777559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
26-474
               

               
Cow position:
               
chr9:62546543-62546097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 67
               

               
Conread position:
               
27-482
               

               
Cow position:
               
chr9:3388229-3387780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
28-467
               

               
Cow position:
               
chr9:8338588-8338134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 68
               

               
Conread position:
               
32-257
               

               
Cow position:
               
chr9:20091810-20091579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
32-262
               

               
Cow position:
               
chr9:5246380-5246132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
78, 61
               

               
Conread position:
               
37-480
               

               
Cow position:
               
chr9:34092877-34093341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
73, 56
               

               
Conread position:
               
39-474
               

               
Cow position:
               
chr9:8998083-8997648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 54
               

               
Conread position:
               
39-482
               

               
Cow position:
               
chr9:35305557-35306028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
42-482
               

               
Cow position:
               
chr9:5434135-5433727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
47-283
               

               
Cow position:
               
chr9:23422212-23422456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
48-468
               

               
Cow position:
               
chr9:42585111-42585521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 159
               

               
Conread position:
               
53-249
               

               
Cow position:
               
chr9:22828585-22828373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 40
               

               
Conread position:
               
53-436
               

               
Cow position:
               
chr9:21963096-21963478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
53-467
               

               
Cow position:
               
chr9:6626981-6626536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
57, 37
               

               
Conread position:
               
53-482
               

               
Cow position:
               
chr9:35375935-35375518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 157
               

               
Conread position:
               
53-512
               

               
Cow position:
               
chr9:62657284-62656856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
55-474
               

               
Cow position:
               
chr9:52504793-52505212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 38
               

               
Conread position:
               
58-400
               

               
Cow position:
               
chr9:27462976-27463331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
58-431
               

               
Cow position:
               
chr9:7327341-7327731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
52, 224
               

               
Conread position:
               
62-483
               

               
Cow position:
               
chr9:56031831-56032235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
64-250
               

               
Cow position:
               
chr9:51566005-51566201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
111, 29
               

               
Conread position:
               
64-281
               

               
Cow position:
               
chr9:29580138-29579904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 32
               

               
Conread position:
               
64-473
               

               
Cow position:
               
chr9:57950809-57951223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 187
               

               
Conread position:
               
65-513
               

               
Cow position:
               
chr9:20416009-20416456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 31
               

               
Conread position:
               
67-254
               

               
Cow position:
               
chr9:31124423-31124627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
70-473
               

               
Cow position:
               
chr9:41789793-41789384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 148
               

               
Conread position:
               
71-451
               

               
Cow position:
               
chr9:10940253-10940631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
71-482
               

               
Cow position:
               
chr9:42445478-42445890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 94
               

               
Conread position:
               
84-473
               

               
Cow position:
               
chr9:31347426-31347055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
32, 10
               

               
Conread position:
               
87-474
               

               
Cow position:
               
chr9:37069064-37069471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 200
               

               
Conread position:
               
90-267
               

               
Cow position:
               
chr9:1751885-1751692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
91-474
               

               
Cow position:
               
chr9:31639841-31640224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
19, 118
               

               
Conread position:
               
104-482
               

               
Cow position:
               
chr9:48118216-48118604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
72, 216
               

               
Conread position:
               
111-446
               

               
Cow position:
               
chr9:32305977-32306312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 81
               

               
Conread position:
               
111-501
               

               
Cow position:
               
chr9:18162698-18163092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 154
               

               
Conread position:
               
112-452
               

               
Cow position:
               
chr9:34400520-34400155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
112-513
               

               
Cow position:
               
chr9:5594949-5594553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
60, 152
               

               
Conread position:
               
114-474
               

               
Cow position:
               
chr9:64092133-64091783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
62, 91
               

               
Conread position:
               
120-474
               

               
Cow position:
               
chr9:21888613-21888265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 63
               

               
Conread position:
               
135-474
               

               
Cow position:
               
chr9:42498257-42497924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 71
               

               
Conread position:
               
146-428
               

               
Cow position:
               
chr9:40059886-40060189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
149-511
               

               
Cow position:
               
chr9:23028215-23027858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 93
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr9:10092006-10092302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
187-369
               

               
Cow position:
               
chr9:20109887-20109708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
117, 66
               

               
Conread position:
               
190-387
               

               
Cow position:
               
chr9:19068184-19067980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
88, 126
               

               
Conread position:
               
190-474
               

               
Cow position:
               
chr9:17785099-17785363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
194-441
               

               
Cow position:
               
chr9:3582564-3582813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 121
               

               
Conread position:
               
195-408
               

               
Cow position:
               
chr9:33697286-33697498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
198, 47
               

               
Conread position:
               
195-417
               

               
Cow position:
               
chr9:18028788-18029016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
64, 43
               

               
Conread position:
               
195-421
               

               
Cow position:
               
chr9:50659071-50659295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
186, 58
               

               
Conread position:
               
195-441
               

               
Cow position:
               
chr9:10760966-10761225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
59, 255
               

               
Conread position:
               
195-442
               

               
Cow position:
               
chr9:32787749-32787979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
155, 58
               

               
Conread position:
               
195-445
               

               
Cow position:
               
chr9:14961329-14961070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
58, 120
               

               
Conread position:
               
195-467
               

               
Cow position:
               
chr9:975378-975111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
148, 55
               

               
Conread position:
               
195-467
               

               
Cow position:
               
chr9:50076445-50076163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 49
               

               
Conread position:
               
195-485
               

               
Cow position:
               
chr9:50691214-50691501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
139, 55
               

               
Conread position:
               
195-491
               

               
Cow position:
               
chr9:36999679-36999980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 190
               

               
Conread position:
               
195-512
               

               
Cow position:
               
chr9:47905925-47906225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 58
               

               
Conread position:
               
196-436
               

               
Cow position:
               
chr9:24850623-24850374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
196-455
               

               
Cow position:
               
chr9:17906141-17906401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
77, 113
               

               
Conread position:
               
196-482
               

               
Cow position:
               
chr9:42998108-42998378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 57
               

               
Conread position:
               
196-512
               

               
Cow position:
               
chr9:41317601-41317915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
220, 63
               

               
Conread position:
               
197-443
               

               
Cow position:
               
chr9:30440245-30440481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
161, 62
               

               
Conread position:
               
198-482
               

               
Cow position:
               
chr9:7363387-7363114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
203-445
               

               
Cow position:
               
chr9:27310374-27310631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
49, 152
               

               
Conread position:
               
211-482
               

               
Cow position:
               
chr9:41513981-41513713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 181
               

               
Conread position:
               
221-505
               

               
Cow position:
               
chr9:58972126-58972434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
41, 291
               

               
Conread position:
               
238-482
               

               
Cow position:
               
chr9:5209909-5209670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
252-472
               

               
Cow position:
               
chr9:36410034-36410257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
253-513
               

               
Cow position:
               
chr9:28354850-28354572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
38, 147
               

               
Conread position:
               
257-474
               

               
Cow position:
               
chr9:22696528-22696319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
106, 54
               

               
Conread position:
               
260-511
               

               
Cow position:
               
chr9:36623142-36623390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 123
               

               
Conread position:
               
261-480
               

               
Cow position:
               
chr9:33940915-33940698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 121
               

               
Conread position:
               
261-482
               

               
Cow position:
               
chr9:35533644-35533863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 47
               

               
Conread position:
               
261-513
               

               
Cow position:
               
chr9:9416097-9416346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 118
               

               
Conread position:
               
267-474
               

               
Cow position:
               
chr9:17871806-17872008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
156, 41
               

               
Conread position:
               
268-511
               

               
Cow position:
               
chr9:29034735-29034977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
40, 112
               

               
Conread position:
               
269-511
               

               
Cow position:
               
chr9:19714370-19714135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
43, 99
               

               
Conread position:
               
270-474
               

               
Cow position:
               
chr9:10011099-10010900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
270-474
               

               
Cow position:
               
chr9:21030614-21030407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
116, 7
               

               
Conread position:
               
270-501
               

               
Cow position:
               
chr9:40542412-40542184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 20
               

               
Conread position:
               
271-482
               

               
Cow position:
               
chr9:64559591-64559795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
271-513
               

               
Cow position:
               
chr9:61997298-61997544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 37
               

               
Conread position:
               
272-467
               

               
Cow position:
               
chr9:26404086-26403890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 165
               

               
Conread position:
               
272-467
               

               
Cow position:
               
chr9:41416647-41416457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
151, 36
               

               
Conread position:
               
272-467
               

               
Cow position:
               
chr9:50080749-50080941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
272-474
               

               
Cow position:
               
chr9:14974629-14974832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
114, 142
               

               
Conread position:
               
272-482
               

               
Cow position:
               
chr9:26391061-26390857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
204, 29
               

               
Conread position:
               
272-484
               

               
Cow position:
               
chr9:20810767-20810977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
116, 42
               

               
Conread position:
               
272-484
               

               
Cow position:
               
chr9:33093241-33093040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
202, 68
               

               
Conread position:
               
272-510
               

               
Cow position:
               
chr9:32676979-32676732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 28
               

               
Conread position:
               
273-474
               

               
Cow position:
               
chr9:17929068-17928858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
273-474
               

               
Cow position:
               
chr9:38344191-38343989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 161
               

               
Conread position:
               
274-486
               

               
Cow position:
               
chr9:3924911-3924707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
275-467
               

               
Cow position:
               
chr9:48343895-48343707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
275-482
               

               
Cow position:
               
chr9:1951976-1952179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 33
               

               
Conread position:
               
277-463
               

               
Cow position:
               
chr9:55256258-55256441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
105, 38
               

               
Conread position:
               
278-468
               

               
Cow position:
               
chr9:20681115-20681301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
14, 76
               

               
Conread position:
               
278-482
               

               
Cow position:
               
chr9:41283318-41283103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
33, 12
               

               
Conread position:
               
279-508
               

               
Cow position:
               
chr9:17634541-17634777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
107, 219
               

               
Conread position:
               
283-502
               

               
Cow position:
               
chr9:13670923-13670702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 151
               

               
Conread position:
               
285-445
               

               
Cow position:
               
chr9:52578249-52578409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
93, 89
               

               
Conread position:
               
285-474
               

               
Cow position:
               
chr9:62360945-62361136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
286-473
               

               
Cow position:
               
chr9:26086350-26086161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
100, 153
               

               
Conread position:
               
287-474
               

               
Cow position:
               
chr9:10877584-10877773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
290-474
               

               
Cow position:
               
chr9:47472975-47472789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
294-503
               

               
Cow position:
               
chr9:52484642-52484855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
139, 88
               

               
Conread position:
               
301-473
               

               
Cow position:
               
chr9:33598249-33598080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
301-474
               

               
Cow position:
               
chr9:41995982-41995808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
85, 134
               

               
Conread position:
               
302-466
               

               
Cow position:
               
chr9:34918999-34919156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
302-474
               

               
Cow position:
               
chr9:43207112-43207281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 41
               

               
Conread position:
               
305-482
               

               
Cow position:
               
chr9:8563105-8562927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
81, 130
               

               
Conread position:
               
310-510
               

               
Cow position:
               
chr9:50702857-50703055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
311-511
               

               
Cow position:
               
chr9:58979659-58979452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
75, 129
               

               
Conread position:
               
316-482
               

               
Cow position:
               
chr9:31814125-31814287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
155, 66
               

               
Conread position:
               
318-503
               

               
Cow position:
               
chr9:61544900-61544716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 81
               

               
Conread position:
               
324-467
               

               
Cow position:
               
chr9:52131263-52131123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
324-490
               

               
Cow position:
               
chr9:35359857-35360028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
326-474
               

               
Cow position:
               
chr9:6840254-6840100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
327-474
               

               
Cow position:
               
chr9:3186385-3186226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
331-482
               

               
Cow position:
               
chr9:11319394-11319544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
145, 100
               

               
Conread position:
               
331-486
               

               
Cow position:
               
chr9:5238634-5238479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
55, 102
               

               
Conread position:
               
338-482
               

               
Cow position:
               
chr9:32711163-32711018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
340-474
               

               
Cow position:
               
chr9:50667653-50667522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
345-513
               

               
Cow position:
               
chr9:6117923-6118095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
346-482
               

               
Cow position:
               
chr9:1973165-1973031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
130, 42
               

               
Conread position:
               
349-501
               

               
Cow position:
               
chr9:1879596-1879444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
127, 33
               

               
Conread position:
               
351-482
               

               
Cow position:
               
chr9:51011322-51011456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 101
               
Show alignments to all cow chromosomes.