Non-Coding RNA Search

Cow genome map


           Conread name:
           rmga16_o4.y2
        

               Conread position:
               1-139
               

               Cow position:
               chrX:1958498-1958357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               1-170
               

               Cow position:
               chrX:28558378-28558547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               108, 32
               

               Conread position:
               1-171
               

               Cow position:
               chrX:39730648-39730477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               115, 26
               

               Conread position:
               1-171
               

               Cow position:
               chrX:45976050-45976222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               110, 13
               

               Conread position:
               1-172
               

               Cow position:
               chrX:12458188-12458362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               1-173
               

               Cow position:
               chrX:5639446-5639271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-174
               

               Cow position:
               chrX:41527020-41526852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               1-175
               

               Cow position:
               chrX:865887-866063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-238
               

               Cow position:
               chrX:20954022-20954270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               109, 13
               

               Conread position:
               1-243
               

               Cow position:
               chrX:23316929-23316671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1-245
               

               Cow position:
               chrX:13405806-13405545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-245
               

               Cow position:
               chrX:26755138-26754878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 13
               

               Conread position:
               1-246
               

               Cow position:
               chrX:1499079-1499346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-246
               

               Cow position:
               chrX:16040190-16039928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               26, 84
               

               Conread position:
               1-246
               

               Cow position:
               chrX:23988032-23988289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               173, 92
               

               Conread position:
               1-251
               

               Cow position:
               chrX:15999987-15999745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               179, 8
               

               Conread position:
               1-251
               

               Cow position:
               chrX:22603947-22603682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               109, 53
               

               Conread position:
               1-251
               

               Cow position:
               chrX:24366460-24366194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               65, 13
               

               Conread position:
               1-251
               

               Cow position:
               chrX:27117454-27117721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-251
               

               Cow position:
               chrX:36195583-36195849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-251
               

               Cow position:
               chrX:45043049-45043315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               108, 92
               

               Conread position:
               1-251
               

               Cow position:
               chrX:45373792-45373535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               105, 83
               

               Conread position:
               1-254
               

               Cow position:
               chrX:323406-323675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-254
               

               Cow position:
               chrX:525167-525436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-254
               

               Cow position:
               chrX:1550438-1550710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-254
               

               Cow position:
               chrX:2479136-2478867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               109, 99
               

               Conread position:
               1-254
               

               Cow position:
               chrX:2486139-2485871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-254
               

               Cow position:
               chrX:5423575-5423306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               114, 92
               

               Conread position:
               1-254
               

               Cow position:
               chrX:6493223-6493492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-254
               

               Cow position:
               chrX:7572871-7573139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               1-254
               

               Cow position:
               chrX:8483581-8483848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-254
               

               Cow position:
               chrX:8782235-8782504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               107, 92
               

               Conread position:
               1-254
               

               Cow position:
               chrX:14030509-14030778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-254
               

               Cow position:
               chrX:14407959-14407690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               108, 92
               

               Conread position:
               1-254
               

               Cow position:
               chrX:15120395-15120129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               98, 7
               

               Conread position:
               1-254
               

               Cow position:
               chrX:15439146-15438889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               167, 92
               

               Conread position:
               1-254
               

               Cow position:
               chrX:16703162-16703430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               98, 141
               

               Conread position:
               1-254
               

               Cow position:
               chrX:16853899-16853629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               20, 93
               

               Conread position:
               1-254
               

               Cow position:
               chrX:17892030-17892303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               205
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               33, 96
               

               Conread position:
               1-254
               

               Cow position:
               chrX:18898159-18897891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               109, 21
               

               Conread position:
               1-254
               

               Cow position:
               chrX:20675598-20675860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               109, 45
               

               Conread position:
               1-254
               

               Cow position:
               chrX:22568526-22568259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-254
               

               Cow position:
               chrX:23038506-23038237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-254
               

               Cow position:
               chrX:24292188-24291922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 164
               

               Conread position:
               1-254
               

               Cow position:
               chrX:24482878-24482611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               109, 13
               

               Conread position:
               1-254
               

               Cow position:
               chrX:24788220-24787956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               27, 93
               

               Conread position:
               1-254
               

               Cow position:
               chrX:27095610-27095879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               109, 99
               

               Conread position:
               1-254
               

               Cow position:
               chrX:27997142-27997410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               109, 30
               

               Conread position:
               1-254
               

               Cow position:
               chrX:28024754-28025023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               109, 93
               

               Conread position:
               1-254
               

               Cow position:
               chrX:30139293-30139024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               18, 24
               

               Conread position:
               1-254
               

               Cow position:
               chrX:30688556-30688825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               115, 92
               

               Conread position:
               1-254
               

               Cow position:
               chrX:34222242-34222509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               107, 118
               

               Conread position:
               1-254
               

               Cow position:
               chrX:35240355-35240624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-254
               

               Cow position:
               chrX:40224754-40224483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               23, 94
               

               Conread position:
               1-254
               

               Cow position:
               chrX:40591177-40591446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-254
               

               Cow position:
               chrX:41156802-41157071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               203
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-258
               

               Cow position:
               chrX:5353812-5353539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               109, 99
               

               Conread position:
               1-258
               

               Cow position:
               chrX:6406837-6407109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               109, 75
               

               Conread position:
               1-258
               

               Cow position:
               chrX:15329144-15329417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               204
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               109, 93
               

               Conread position:
               1-258
               

               Cow position:
               chrX:20726251-20726524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-258
               

               Cow position:
               chrX:23572309-23572036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-258
               

               Cow position:
               chrX:26531450-26531722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               96, 122
               

               Conread position:
               1-258
               

               Cow position:
               chrX:27305420-27305690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               107, 22
               

               Conread position:
               1-258
               

               Cow position:
               chrX:29602549-29602281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               109, 91
               

               Conread position:
               1-258
               

               Cow position:
               chrX:36513953-36514217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               109, 207
               

               Conread position:
               1-258
               

               Cow position:
               chrX:39292252-39291979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-262
               

               Cow position:
               chrX:23135067-23135344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               53, 93
               

               Conread position:
               1-262
               

               Cow position:
               chrX:30093873-30093595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               210
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               108, 92
               

               Conread position:
               1-262
               

               Cow position:
               chrX:35025299-35025573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               179, 13
               

               Conread position:
               1-262
               

               Cow position:
               chrX:38963604-38963881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-263
               

               Cow position:
               chrX:45992738-45993018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               92, 13
               

               Conread position:
               1-266
               

               Cow position:
               chrX:34990552-34990813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               108, 21
               

               Conread position:
               1-270
               

               Cow position:
               chrX:9635762-9635470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               108, 92
               

               Conread position:
               1-282
               

               Cow position:
               chrX:21662586-21662884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               109, 147
               

               Conread position:
               1-283
               

               Cow position:
               chrX:11855660-11855957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 92
               

               Conread position:
               1-283
               

               Cow position:
               chrX:33493223-33493521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               220
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               108, 92
               

               Conread position:
               1-283
               

               Cow position:
               chrX:36975331-36975631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               19, 96
               

               Conread position:
               1-285
               

               Cow position:
               chrX:24317558-24317855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               79, 13
               

               Conread position:
               1-298
               

               Cow position:
               chrX:35847707-35848018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 91
               

               Conread position:
               1-303
               

               Cow position:
               chrX:28632986-28632667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               110, 92
               

               Conread position:
               1-322
               

               Cow position:
               chrX:10256651-10256335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-332
               

               Cow position:
               chrX:22449405-22449738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               110, 92
               

               Conread position:
               1-383
               

               Cow position:
               chrX:48310894-48310496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               108, 92
               

               Conread position:
               1-386
               

               Cow position:
               chrX:15621041-15620659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               278
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-386
               

               Cow position:
               chrX:26506450-26506071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-390
               

               Cow position:
               chrX:30836864-30837250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               265
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               115, 92
               

               Conread position:
               1-395
               

               Cow position:
               chrX:9898849-9898459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-399
               

               Cow position:
               chrX:22600922-22600529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               266
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               173, 64
               

               Conread position:
               1-414
               

               Cow position:
               chrX:3569942-3570349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               108, 92
               

               Conread position:
               1-417
               

               Cow position:
               chrX:33538418-33538849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 13
               

               Conread position:
               1-421
               

               Cow position:
               chrX:22811377-22811795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-421
               

               Cow position:
               chrX:29780236-29780650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               284
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-421
               

               Cow position:
               chrX:32871295-32870877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-424
               

               Cow position:
               chrX:41847043-41846621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 81
               

               Conread position:
               1-426
               

               Cow position:
               chrX:22115793-22115370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 50
               

               Conread position:
               1-426
               

               Cow position:
               chrX:29049468-29049876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 62
               

               Conread position:
               1-427
               

               Cow position:
               chrX:29903233-29903659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               298
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-428
               

               Cow position:
               chrX:28559343-28558918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               309
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               108, 92
               

               Conread position:
               1-428
               

               Cow position:
               chrX:30531537-30531111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               109, 27
               

               Conread position:
               1-428
               

               Cow position:
               chrX:38051941-38051517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               308
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               109, 99
               

               Conread position:
               1-431
               

               Cow position:
               chrX:32144671-32144249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               306
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               71, 61
               

               Conread position:
               1-439
               

               Cow position:
               chrX:24735435-24735866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               308
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               109, 91
               

               Conread position:
               1-445
               

               Cow position:
               chrX:14819204-14819647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               311
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               108, 57
               

               Conread position:
               1-447
               

               Cow position:
               chrX:3653265-3653692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 85
               

               Conread position:
               1-447
               

               Cow position:
               chrX:24587963-24587519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               311
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               109, 99
               

               Conread position:
               1-447
               

               Cow position:
               chrX:40545131-40544673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               323
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               78, 280
               

               Conread position:
               1-451
               

               Cow position:
               chrX:4905499-4905052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               318
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               109, 269
               

               Conread position:
               1-451
               

               Cow position:
               chrX:11950002-11949558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 268
               

               Conread position:
               1-451
               

               Cow position:
               chrX:16711446-16711893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               302
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               98, 205
               

               Conread position:
               1-451
               

               Cow position:
               chrX:22493498-22493946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               317
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-451
               

               Cow position:
               chrX:23280498-23280942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               314
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-451
               

               Cow position:
               chrX:23341502-23341029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               314
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               173, 99
               

               Conread position:
               1-451
               

               Cow position:
               chrX:30143793-30143346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-451
               

               Cow position:
               chrX:30180436-30179989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               314
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               21, 93
               

               Conread position:
               1-458
               

               Cow position:
               chrX:29915734-29915280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               313
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               98, 206
               

               Conread position:
               1-461
               

               Cow position:
               chrX:20582522-20582972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 61
               

               Conread position:
               1-467
               

               Cow position:
               chrX:6543748-6544206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 92
               

               Conread position:
               1-467
               

               Cow position:
               chrX:15007660-15007199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-467
               

               Cow position:
               chrX:21226965-21227425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               326
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               117, 266
               

               Conread position:
               1-467
               

               Cow position:
               chrX:36250373-36249911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 91
               

               Conread position:
               1-468
               

               Cow position:
               chrX:35268386-35268833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 66
               

               Conread position:
               1-472
               

               Cow position:
               chrX:16478406-16478862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               320
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-473
               

               Cow position:
               chrX:14162682-14163152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               327
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               105, 268
               

               Conread position:
               1-473
               

               Cow position:
               chrX:31728954-31729398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 18
               

               Conread position:
               1-474
               

               Cow position:
               chrX:3417646-3417178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               324
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               109, 7
               

               Conread position:
               1-474
               

               Cow position:
               chrX:3649317-3648857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               325
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:5289196-5288725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               330
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:6870072-6869600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               320
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:7512983-7513471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 55
               

               Conread position:
               1-474
               

               Cow position:
               chrX:7571394-7571860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 24
               

               Conread position:
               1-474
               

               Cow position:
               chrX:9169123-9168652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:11715971-11715500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               328
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:12309895-12309428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:13785892-13785406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 265
               

               Conread position:
               1-474
               

               Cow position:
               chrX:14122260-14121790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:15531661-15531193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:16074079-16074538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               323
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:16285702-16286171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               322
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               115, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:17782990-17783461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               323
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:18078420-18077948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 269
               

               Conread position:
               1-474
               

               Cow position:
               chrX:18950246-18949783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               325
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               109, 35
               

               Conread position:
               1-474
               

               Cow position:
               chrX:20878271-20877801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               329
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               108, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:21785260-21785725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               327
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               98, 235
               

               Conread position:
               1-474
               

               Cow position:
               chrX:23387047-23386585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               315
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               109, 21
               

               Conread position:
               1-474
               

               Cow position:
               chrX:24769369-24768902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               330
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:30133817-30133363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:30172217-30171748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               324
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               115, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:34554227-34554683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 59
               

               Conread position:
               1-474
               

               Cow position:
               chrX:35609477-35609946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 206
               

               Conread position:
               1-474
               

               Cow position:
               chrX:35680836-35681298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 91
               

               Conread position:
               1-474
               

               Cow position:
               chrX:37134042-37133572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               327
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               109, 23
               

               Conread position:
               1-474
               

               Cow position:
               chrX:39714042-39714511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               326
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:40268967-40269445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:40481379-40480911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-474
               

               Cow position:
               chrX:41103279-41103748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-476
               

               Cow position:
               chrX:38151180-38151653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               333
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               109, 21
               

               Conread position:
               1-480
               

               Cow position:
               chrX:151394-151867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-480
               

               Cow position:
               chrX:45430531-45430053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 38
               

               Conread position:
               1-481
               

               Cow position:
               chrX:29225969-29226446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               330
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               109, 78
               

               Conread position:
               1-482
               

               Cow position:
               chrX:10412479-10412020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 18
               

               Conread position:
               1-482
               

               Cow position:
               chrX:11655568-11656058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               506
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-482
               

               Cow position:
               chrX:12249293-12249768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 52
               

               Conread position:
               1-482
               

               Cow position:
               chrX:20340399-20339924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 155
               

               Conread position:
               1-482
               

               Cow position:
               chrX:21592778-21593254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 76
               

               Conread position:
               1-482
               

               Cow position:
               chrX:27446186-27446662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 92
               

               Conread position:
               1-482
               

               Cow position:
               chrX:27749518-27749015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               510
               

               Alignm identity:
               336
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-482
               

               Cow position:
               chrX:34441952-34441485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 18
               

               Conread position:
               1-482
               

               Cow position:
               chrX:34761557-34762035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               323
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-482
               

               Cow position:
               chrX:38227602-38227127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 271
               

               Conread position:
               1-482
               

               Cow position:
               chrX:40452729-40452243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-482
               

               Cow position:
               chrX:46533029-46532536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               504
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-484
               

               Cow position:
               chrX:14598337-14598819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               505
               

               Alignm identity:
               334
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-486
               

               Cow position:
               chrX:42086354-42086832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 92
               

               Conread position:
               1-489
               

               Cow position:
               chrX:3361312-3361797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               510
               

               Alignm identity:
               332
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-490
               

               Cow position:
               chrX:26626206-26625695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               525
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 275
               

               Conread position:
               1-491
               

               Cow position:
               chrX:23396098-23396579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               327
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               109, 21
               

               Conread position:
               1-491
               

               Cow position:
               chrX:38438979-38439454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               511
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 61
               

               Conread position:
               1-492
               

               Cow position:
               chrX:36535244-36534753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               310
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-494
               

               Cow position:
               chrX:36794485-36794997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               521
               

               Alignm identity:
               343
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-501
               

               Cow position:
               chrX:160919-161403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               524
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-501
               

               Cow position:
               chrX:23969848-23970368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               530
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 336
               

               Conread position:
               1-501
               

               Cow position:
               chrX:37489217-37489715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               523
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 95
               

               Conread position:
               1-501
               

               Cow position:
               chrX:42994114-42994605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               521
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 49
               

               Conread position:
               1-504
               

               Cow position:
               chrX:4996106-4996591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               518
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 92
               

               Conread position:
               1-504
               

               Cow position:
               chrX:24105119-24105617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               524
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 65
               

               Conread position:
               1-504
               

               Cow position:
               chrX:34543255-34543774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               525
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-507
               

               Cow position:
               chrX:6372672-6373175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               527
               

               Alignm identity:
               349
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-507
               

               Cow position:
               chrX:21415572-21416091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               540
               

               Alignm identity:
               348
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               100, 35
               

               Conread position:
               1-507
               

               Cow position:
               chrX:29849140-29848632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               532
               

               Alignm identity:
               351
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-507
               

               Cow position:
               chrX:45413158-45412660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               519
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 93
               

               Conread position:
               1-509
               

               Cow position:
               chrX:30823007-30823513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               531
               

               Alignm identity:
               351
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-512
               

               Cow position:
               chrX:38852650-38853198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               552
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               1-513
               

               Cow position:
               chrX:11083119-11082621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               533
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 76
               

               Conread position:
               1-513
               

               Cow position:
               chrX:31949438-31948934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               523
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 70
               

               Conread position:
               1-513
               

               Cow position:
               chrX:44192951-44192445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 21
               

               Conread position:
               2-155
               

               Cow position:
               chrX:40187470-40187625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               108, 82
               

               Conread position:
               2-170
               

               Cow position:
               chrX:22771642-22771470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               97, 143
               

               Conread position:
               2-172
               

               Cow position:
               chrX:35260468-35260640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               108, 91
               

               Conread position:
               2-174
               

               Cow position:
               chrX:12996366-12996195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               2-175
               

               Cow position:
               chrX:24174463-24174284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               19, 150
               

               Conread position:
               2-244
               

               Cow position:
               chrX:25816765-25816505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               6, 93
               

               Conread position:
               2-246
               

               Cow position:
               chrX:31202333-31202592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               103, 14
               

               Conread position:
               2-251
               

               Cow position:
               chrX:27498259-27498525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               2-251
               

               Cow position:
               chrX:39560160-39559895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               108, 92
               

               Conread position:
               2-254
               

               Cow position:
               chrX:3405863-3405595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               108, 7
               

               Conread position:
               2-254
               

               Cow position:
               chrX:24280426-24280695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               2-254
               

               Cow position:
               chrX:27977339-27977069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               2-254
               

               Cow position:
               chrX:40121511-40121255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               108, 91
               

               Conread position:
               2-254
               

               Cow position:
               chrX:41790944-41790680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               51, 95
               

               Conread position:
               2-257
               

               Cow position:
               chrX:40788639-40788920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               98, 269
               

               Conread position:
               2-258
               

               Cow position:
               chrX:19929922-19930194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               108, 14
               

               Conread position:
               2-274
               

               Cow position:
               chrX:16078160-16078448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               20, 274
               

               Conread position:
               2-279
               

               Cow position:
               chrX:20131398-20131096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               2-283
               

               Cow position:
               chrX:27772590-27772322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               107, 60
               

               Conread position:
               2-283
               

               Cow position:
               chrX:28624267-28623969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               99, 91
               

               Conread position:
               2-414
               

               Cow position:
               chrX:39698819-39699227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               293
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               106, 91
               

               Conread position:
               2-421
               

               Cow position:
               chrX:10416033-10415621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 91
               

               Conread position:
               2-421
               

               Cow position:
               chrX:44930132-44930545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               71, 261
               

               Conread position:
               2-429
               

               Cow position:
               chrX:13058051-13058497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 92
               

               Conread position:
               2-429
               

               Cow position:
               chrX:23414896-23414445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 94
               

               Conread position:
               2-429
               

               Cow position:
               chrX:33631646-33632095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 229
               

               Conread position:
               2-436
               

               Cow position:
               chrX:33827557-33827097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               470
               

               Alignm identity:
               319
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               90, 284
               

               Conread position:
               2-444
               

               Cow position:
               chrX:1977985-1978445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 63
               

               Conread position:
               2-444
               

               Cow position:
               chrX:39546488-39546044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 92
               

               Conread position:
               2-445
               

               Cow position:
               chrX:25205196-25205653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 57
               

               Conread position:
               2-462
               

               Cow position:
               chrX:11819856-11820301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               325
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               108, 71
               

               Conread position:
               2-464
               

               Cow position:
               chrX:22538462-22538004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 267
               

               Conread position:
               2-467
               

               Cow position:
               chrX:7424919-7425419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               506
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 62
               

               Conread position:
               2-467
               

               Cow position:
               chrX:44961205-44961699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 58
               

               Conread position:
               2-473
               

               Cow position:
               chrX:25337694-25338141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 22
               

               Conread position:
               2-474
               

               Cow position:
               chrX:1055900-1055437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 91
               

               Conread position:
               2-474
               

               Cow position:
               chrX:1331428-1331897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               329
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               87, 102
               

               Conread position:
               2-474
               

               Cow position:
               chrX:4123328-4123795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 22
               

               Conread position:
               2-474
               

               Cow position:
               chrX:4869051-4869505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               478
               

               Alignm identity:
               311
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               108, 6
               

               Conread position:
               2-474
               

               Cow position:
               chrX:13071112-13070640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               327
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               87, 269
               

               Conread position:
               2-474
               

               Cow position:
               chrX:13091672-13091200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               325
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               87, 269
               

               Conread position:
               2-474
               

               Cow position:
               chrX:14884470-14884001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 91
               

               Conread position:
               2-474
               

               Cow position:
               chrX:19109549-19109079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               332
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               114, 91
               

               Conread position:
               2-474
               

               Cow position:
               chrX:20742479-20742948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               316
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               108, 60
               

               Conread position:
               2-474
               

               Cow position:
               chrX:30455130-30454660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               321
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               111, 267
               

               Conread position:
               2-474
               

               Cow position:
               chrX:35388418-35387945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 94
               

               Conread position:
               2-474
               

               Cow position:
               chrX:42459664-42460142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 91
               

               Conread position:
               2-482
               

               Cow position:
               chrX:8434712-8434238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               323
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               108, 264
               

               Conread position:
               2-482
               

               Cow position:
               chrX:16465792-16466270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               330
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               108, 91
               

               Conread position:
               2-482
               

               Cow position:
               chrX:17497588-17498050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 91
               

               Conread position:
               2-482
               

               Cow position:
               chrX:25459146-25458668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 92
               

               Conread position:
               2-482
               

               Cow position:
               chrX:27705085-27705552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 91
               

               Conread position:
               2-482
               

               Cow position:
               chrX:39558873-39558384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               2-491
               

               Cow position:
               chrX:42462257-42461768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               511
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 274
               

               Conread position:
               2-491
               

               Cow position:
               chrX:44054295-44054783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 92
               

               Conread position:
               2-506
               

               Cow position:
               chrX:17631341-17630809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               537
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 92
               

               Conread position:
               2-511
               

               Cow position:
               chrX:29289069-29289583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               532
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 82
               

               Conread position:
               2-511
               

               Cow position:
               chrX:35409166-35409651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               513
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 60
               

               Conread position:
               2-511
               

               Cow position:
               chrX:42470444-42469944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               531
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 41
               

               Conread position:
               2-512
               

               Cow position:
               chrX:10866374-10865871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               517
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 12
               

               Conread position:
               2-512
               

               Cow position:
               chrX:11674548-11675065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               538
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 39
               

               Conread position:
               2-512
               

               Cow position:
               chrX:16733258-16732739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               539
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 94
               

               Conread position:
               2-513
               

               Cow position:
               chrX:41122562-41123068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               534
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 275
               

               Conread position:
               3-445
               

               Cow position:
               chrX:32623054-32623514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               3-474
               

               Cow position:
               chrX:32743038-32743492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 22
               

               Conread position:
               3-480
               

               Cow position:
               chrX:19878526-19879006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               511
               

               Alignm identity:
               351
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               107, 91
               

               Conread position:
               3-501
               

               Cow position:
               chrX:31489004-31489510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 92
               

               Conread position:
               4-168
               

               Cow position:
               chrX:40559769-40559603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               106, 89
               

               Conread position:
               4-239
               

               Cow position:
               chrX:27590539-27590288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               106, 89
               

               Conread position:
               4-248
               

               Cow position:
               chrX:37781584-37781331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               101, 21
               

               Conread position:
               4-255
               

               Cow position:
               chrX:17965022-17964755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               107, 89
               

               Conread position:
               4-257
               

               Cow position:
               chrX:8517098-8517371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               106, 88
               

               Conread position:
               4-263
               

               Cow position:
               chrX:4750878-4750606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               106, 91
               

               Conread position:
               4-288
               

               Cow position:
               chrX:27443067-27442757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               90, 293
               

               Conread position:
               4-426
               

               Cow position:
               chrX:33803527-33803097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 89
               

               Conread position:
               4-441
               

               Cow position:
               chrX:34564794-34565209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 89
               

               Conread position:
               4-467
               

               Cow position:
               chrX:24441756-24441292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               318
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               106, 89
               

               Conread position:
               4-474
               

               Cow position:
               chrX:22812556-22813025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 89
               

               Conread position:
               4-474
               

               Cow position:
               chrX:40827252-40826794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 90
               

               Conread position:
               4-482
               

               Cow position:
               chrX:41879436-41878967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 90
               

               Conread position:
               4-507
               

               Cow position:
               chrX:30228620-30228108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               533
               

               Alignm identity:
               348
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               56, 93
               

               Conread position:
               5-474
               

               Cow position:
               chrX:14133972-14134437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               320
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               5-474
               

               Cow position:
               chrX:45113129-45113576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 182
               

               Conread position:
               5-505
               

               Cow position:
               chrX:38072272-38071771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               521
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 88
               

               Conread position:
               6-283
               

               Cow position:
               chrX:39352159-39351859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               105, 87
               

               Conread position:
               6-491
               

               Cow position:
               chrX:5871813-5872295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 87
               

               Conread position:
               7-251
               

               Cow position:
               chrX:38940873-38941134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               66, 87
               

               Conread position:
               7-258
               

               Cow position:
               chrX:6695853-6695581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               103, 87
               

               Conread position:
               7-378
               

               Cow position:
               chrX:2351559-2351927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 86
               

               Conread position:
               7-447
               

               Cow position:
               chrX:38934751-38935218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 87
               

               Conread position:
               7-474
               

               Cow position:
               chrX:27105754-27106220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               329
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               20, 94
               

               Conread position:
               7-490
               

               Cow position:
               chrX:9854770-9855278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               511
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 86
               

               Conread position:
               7-501
               

               Cow position:
               chrX:9953612-9954130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               521
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 86
               

               Conread position:
               7-512
               

               Cow position:
               chrX:878873-878380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               514
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 86
               

               Conread position:
               8-254
               

               Cow position:
               chrX:8869887-8869624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               102, 85
               

               Conread position:
               8-258
               

               Cow position:
               chrX:45786628-45786894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               102, 85
               

               Conread position:
               9-258
               

               Cow position:
               chrX:31745998-31745733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               101, 84
               

               Conread position:
               9-281
               

               Cow position:
               chrX:12980848-12980561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 84
               

               Conread position:
               9-420
               

               Cow position:
               chrX:19437586-19437171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               290
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               137, 35
               

               Conread position:
               9-471
               

               Cow position:
               chrX:34754693-34754233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 75
               

               Conread position:
               9-473
               

               Cow position:
               chrX:24424898-24424432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 264
               

               Conread position:
               11-174
               

               Cow position:
               chrX:31251766-31251931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               98, 82
               

               Conread position:
               14-249
               

               Cow position:
               chrX:37572668-37572919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               97, 79
               

               Conread position:
               14-444
               

               Cow position:
               chrX:12437728-12437325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               308
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               95, 22
               

               Conread position:
               14-467
               

               Cow position:
               chrX:23121887-23122341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               324
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               96, 223
               

               Conread position:
               15-254
               

               Cow position:
               chrX:12145600-12145855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               101, 78
               

               Conread position:
               15-400
               

               Cow position:
               chrX:21862165-21861785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 78
               

               Conread position:
               15-445
               

               Cow position:
               chrX:40279307-40279749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 78
               

               Conread position:
               15-474
               

               Cow position:
               chrX:12115546-12116003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 78
               

               Conread position:
               20-414
               

               Cow position:
               chrX:47243795-47243375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               20-480
               

               Cow position:
               chrX:35272877-35273317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 64
               

               Conread position:
               21-254
               

               Cow position:
               chrX:5375876-5376129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               58, 76
               

               Conread position:
               21-258
               

               Cow position:
               chrX:29864920-29864667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               21-288
               

               Cow position:
               chrX:12008171-12007884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               89, 72
               

               Conread position:
               21-417
               

               Cow position:
               chrX:626530-626141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               277
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               89, 39
               

               Conread position:
               21-484
               

               Cow position:
               chrX:13648273-13647817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 72
               

               Conread position:
               21-507
               

               Cow position:
               chrX:7551284-7550791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               515
               

               Alignm identity:
               341
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               22-480
               

               Cow position:
               chrX:38840362-38840851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 8
               

               Conread position:
               24-173
               

               Cow position:
               chrX:18215445-18215597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               86, 69
               

               Conread position:
               24-248
               

               Cow position:
               chrX:34238234-34238475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               86, 69
               

               Conread position:
               24-473
               

               Cow position:
               chrX:29937533-29937983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               86, 26
               

               Conread position:
               26-443
               

               Cow position:
               chrX:27760857-27761273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               87, 67
               

               Conread position:
               26-451
               

               Cow position:
               chrX:32094935-32094511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               297
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               84, 244
               

               Conread position:
               27-440
               

               Cow position:
               chrX:2185747-2186185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 50
               

               Conread position:
               29-174
               

               Cow position:
               chrX:6235138-6234991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 65
               

               Conread position:
               29-307
               

               Cow position:
               chrX:31385236-31385530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               80, 256
               

               Conread position:
               31-257
               

               Cow position:
               chrX:42381908-42381665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 99
               

               Conread position:
               31-260
               

               Cow position:
               chrX:29760220-29760465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               34-255
               

               Cow position:
               chrX:48287907-48287679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               76, 59
               

               Conread position:
               34-467
               

               Cow position:
               chrX:17794517-17794933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 61
               

               Conread position:
               35-345
               

               Cow position:
               chrX:47654829-47655132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               75, 58
               

               Conread position:
               35-474
               

               Cow position:
               chrX:13868230-13868660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 68
               

               Conread position:
               36-450
               

               Cow position:
               chrX:21833410-21833823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               290
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               74, 234
               

               Conread position:
               38-491
               

               Cow position:
               chrX:27516065-27516505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 11
               

               Conread position:
               38-513
               

               Cow position:
               chrX:40693211-40692749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 25
               

               Conread position:
               40-511
               

               Cow position:
               chrX:40180341-40179878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               309
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               70, 168
               

               Conread position:
               41-395
               

               Cow position:
               chrX:15718146-15717796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               69, 52
               

               Conread position:
               41-444
               

               Cow position:
               chrX:19228550-19228135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               301
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               62, 53
               

               Conread position:
               42-339
               

               Cow position:
               chrX:38067181-38066887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               68, 51
               

               Conread position:
               42-482
               

               Cow position:
               chrX:24260081-24259619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               329
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               68, 42
               

               Conread position:
               43-458
               

               Cow position:
               chrX:32128461-32128040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 50
               

               Conread position:
               44-480
               

               Cow position:
               chrX:30162544-30162961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               67, 33
               

               Conread position:
               48-428
               

               Cow position:
               chrX:25163331-25163733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 45
               

               Conread position:
               50-431
               

               Cow position:
               chrX:27019745-27020111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               265
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               60, 44
               

               Conread position:
               53-496
               

               Cow position:
               chrX:8899568-8900015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 40
               

               Conread position:
               63-503
               

               Cow position:
               chrX:21666038-21665600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 182
               

               Conread position:
               64-254
               

               Cow position:
               chrX:42222014-42221808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               46, 30
               

               Conread position:
               64-443
               

               Cow position:
               chrX:19022981-19023369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 30
               

               Conread position:
               64-474
               

               Cow position:
               chrX:23564243-23563833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 29
               

               Conread position:
               64-482
               

               Cow position:
               chrX:38094971-38094555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 29
               

               Conread position:
               65-240
               

               Cow position:
               chrX:10438096-10437904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               45, 28
               

               Conread position:
               65-482
               

               Cow position:
               chrX:28133904-28134312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 28
               

               Conread position:
               67-415
               

               Cow position:
               chrX:3130123-3130482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               67-467
               

               Cow position:
               chrX:41884879-41884464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 27
               

               Conread position:
               67-474
               

               Cow position:
               chrX:40035912-40035486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 17
               

               Conread position:
               69-513
               

               Cow position:
               chrX:4044299-4043857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 24
               

               Conread position:
               72-400
               

               Cow position:
               chrX:12096684-12096367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               74-482
               

               Cow position:
               chrX:5017840-5017448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               263
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               34, 19
               

               Conread position:
               84-474
               

               Cow position:
               chrX:38967224-38967605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 105
               

               Conread position:
               85-439
               

               Cow position:
               chrX:10916322-10916671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               25, 188
               

               Conread position:
               86-474
               

               Cow position:
               chrX:14599111-14599490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 125
               

               Conread position:
               87-480
               

               Cow position:
               chrX:16284404-16283980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 420
               

               Conread position:
               88-474
               

               Cow position:
               chrX:32419767-32420177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 8
               

               Conread position:
               96-474
               

               Cow position:
               chrX:11581522-11581902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 93
               

               Conread position:
               101-474
               

               Cow position:
               chrX:10831919-10831536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 175
               

               Conread position:
               109-474
               

               Cow position:
               chrX:8796852-8797210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 74
               

               Conread position:
               116-472
               

               Cow position:
               chrX:34401606-34401953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 89
               

               Conread position:
               116-473
               

               Cow position:
               chrX:27288140-27287777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 216
               

               Conread position:
               117-505
               

               Cow position:
               chrX:42508034-42507646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               270
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               278, 15
               

               Conread position:
               132-467
               

               Cow position:
               chrX:41198710-41199057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 161
               

               Conread position:
               132-474
               

               Cow position:
               chrX:25035762-25035422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 73
               

               Conread position:
               132-474
               

               Cow position:
               chrX:33855616-33855276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               44, 134
               

               Conread position:
               134-474
               

               Cow position:
               chrX:41743539-41743869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 52
               

               Conread position:
               146-440
               

               Cow position:
               chrX:22139445-22139141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               30, 179
               

               Conread position:
               146-474
               

               Cow position:
               chrX:11561780-11562113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               251
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               9, 106
               

               Conread position:
               147-357
               

               Cow position:
               chrX:29055640-29055847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               52, 28
               

               Conread position:
               147-474
               

               Cow position:
               chrX:11806377-11806056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               99, 39
               

               Conread position:
               149-512
               

               Cow position:
               chrX:37843361-37843723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 56
               

               Conread position:
               159-513
               

               Cow position:
               chrX:23514373-23514018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 27
               

               Conread position:
               190-443
               

               Cow position:
               chrX:18287388-18287129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               63, 41
               

               Conread position:
               195-427
               

               Cow position:
               chrX:45465935-45466154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               106, 58
               

               Conread position:
               195-439
               

               Cow position:
               chrX:26883448-26883206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               223, 54
               

               Conread position:
               195-445
               

               Cow position:
               chrX:7508827-7509070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 52
               

               Conread position:
               195-474
               

               Cow position:
               chrX:16542005-16541714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 124
               

               Conread position:
               195-474
               

               Cow position:
               chrX:34663158-34662890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 101
               

               Conread position:
               195-474
               

               Cow position:
               chrX:41403662-41403936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 60
               

               Conread position:
               195-474
               

               Cow position:
               chrX:41410210-41410484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 60
               

               Conread position:
               195-474
               

               Cow position:
               chrX:45089138-45089406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               191, 58
               

               Conread position:
               195-474
               

               Cow position:
               chrX:45566309-45566593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 227
               

               Conread position:
               195-482
               

               Cow position:
               chrX:11589910-11589621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 24
               

               Conread position:
               195-482
               

               Cow position:
               chrX:41083606-41083889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               207
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               64, 149
               

               Conread position:
               195-503
               

               Cow position:
               chrX:42492829-42492523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 102
               

               Conread position:
               195-511
               

               Cow position:
               chrX:1514725-1514407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 190
               

               Conread position:
               196-482
               

               Cow position:
               chrX:21004360-21004646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               64, 109
               

               Conread position:
               198-348
               

               Cow position:
               chrX:31829744-31829591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               68, 114
               

               Conread position:
               199-444
               

               Cow position:
               chrX:6607114-6607354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 54
               

               Conread position:
               203-467
               

               Cow position:
               chrX:20029956-20030207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               108, 50
               

               Conread position:
               210-482
               

               Cow position:
               chrX:41167267-41166998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 25
               

               Conread position:
               213-474
               

               Cow position:
               chrX:21672247-21672513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 225
               

               Conread position:
               233-511
               

               Cow position:
               chrX:31443100-31442828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               234-467
               

               Cow position:
               chrX:6639844-6640080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 19
               

               Conread position:
               237-505
               

               Cow position:
               chrX:30833114-30832852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               244-482
               

               Cow position:
               chrX:40647709-40647952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               252-474
               

               Cow position:
               chrX:34411581-34411799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               63, 39
               

               Conread position:
               252-474
               

               Cow position:
               chrX:47588441-47588669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               52, 20
               

               Conread position:
               252-512
               

               Cow position:
               chrX:17662857-17662594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 11
               

               Conread position:
               257-474
               

               Cow position:
               chrX:40557931-40557724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               257-486
               

               Cow position:
               chrX:8730824-8731056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               127, 15
               

               Conread position:
               257-511
               

               Cow position:
               chrX:19689963-19690219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 15
               

               Conread position:
               258-510
               

               Cow position:
               chrX:24366085-24365830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               15, 38
               

               Conread position:
               259-485
               

               Cow position:
               chrX:28878417-28878201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               14, 114
               

               Conread position:
               259-513
               

               Cow position:
               chrX:7718598-7718855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 155
               

               Conread position:
               261-491
               

               Cow position:
               chrX:8925450-8925677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               12, 122
               

               Conread position:
               261-507
               

               Cow position:
               chrX:27394266-27394025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               208, 123
               

               Conread position:
               264-445
               

               Cow position:
               chrX:10373058-10373248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               42, 170
               

               Conread position:
               265-467
               

               Cow position:
               chrX:27432168-27431964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 162
               

               Conread position:
               268-467
               

               Cow position:
               chrX:18468790-18468989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               180, 116
               

               Conread position:
               271-444
               

               Cow position:
               chrX:12826505-12826678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               109, 164
               

               Conread position:
               271-511
               

               Cow position:
               chrX:42339178-42338944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 111
               

               Conread position:
               272-444
               

               Cow position:
               chrX:16531758-16531928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               164, 36
               

               Conread position:
               272-461
               

               Cow position:
               chrX:11844482-11844300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               155
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               151, 39
               

               Conread position:
               272-467
               

               Cow position:
               chrX:4269309-4269111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               159
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               50, 111
               

               Conread position:
               272-474
               

               Cow position:
               chrX:12018034-12018249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               92, 99
               

               Conread position:
               272-474
               

               Cow position:
               chrX:14924759-14924958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               272-474
               

               Cow position:
               chrX:19015201-19015395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               272-474
               

               Cow position:
               chrX:20677124-20677328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               85, 22
               

               Conread position:
               272-474
               

               Cow position:
               chrX:32020363-32020162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 110
               

               Conread position:
               272-474
               

               Cow position:
               chrX:48195282-48195080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               158, 112
               

               Conread position:
               272-478
               

               Cow position:
               chrX:38007009-38006804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               164
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               114, 161
               

               Conread position:
               272-482
               

               Cow position:
               chrX:20151609-20151815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 100
               

               Conread position:
               272-482
               

               Cow position:
               chrX:23497904-23497702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 36
               

               Conread position:
               272-482
               

               Cow position:
               chrX:28845605-28845797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               205, 36
               

               Conread position:
               272-512
               

               Cow position:
               chrX:31436239-31436474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               39, 107
               

               Conread position:
               273-491
               

               Cow position:
               chrX:30921945-30922162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               99, 70
               

               Conread position:
               273-492
               

               Cow position:
               chrX:9997573-9997358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 35
               

               Conread position:
               274-472
               

               Cow position:
               chrX:34502681-34502877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 34
               

               Conread position:
               274-513
               

               Cow position:
               chrX:25713560-25713796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               275-471
               

               Cow position:
               chrX:19019348-19019152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               160
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               36, 15
               

               Conread position:
               275-474
               

               Cow position:
               chrX:44835054-44834852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               138, 119
               

               Conread position:
               275-482
               

               Cow position:
               chrX:42855170-42855378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 197
               

               Conread position:
               276-474
               

               Cow position:
               chrX:47873578-47873379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               110, 66
               

               Conread position:
               276-491
               

               Cow position:
               chrX:42874741-42874960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 32
               

               Conread position:
               276-511
               

               Cow position:
               chrX:40116188-40116415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 30
               

               Conread position:
               276-513
               

               Cow position:
               chrX:6690485-6690254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               193, 98
               

               Conread position:
               277-484
               

               Cow position:
               chrX:10306434-10306643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               277-513
               

               Cow position:
               chrX:20697844-20697603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 106
               

               Conread position:
               279-451
               

               Cow position:
               chrX:48536899-48536728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               109, 42
               

               Conread position:
               279-482
               

               Cow position:
               chrX:11856195-11856393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               281-474
               

               Cow position:
               chrX:42381332-42381145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               157
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               283-474
               

               Cow position:
               chrX:5900227-5900426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               140, 103
               

               Conread position:
               283-474
               

               Cow position:
               chrX:6278736-6278543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               154
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               283-484
               

               Cow position:
               chrX:46984732-46984524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               28, 124
               

               Conread position:
               283-501
               

               Cow position:
               chrX:2206774-2206564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               193, 99
               

               Conread position:
               284-472
               

               Cow position:
               chrX:13265849-13265668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               155
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               284-482
               

               Cow position:
               chrX:47481570-47481768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               192, 97
               

               Conread position:
               288-491
               

               Cow position:
               chrX:36283120-36283328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               166
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               289-482
               

               Cow position:
               chrX:11633454-11633646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               156
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               187, 93
               

               Conread position:
               290-474
               

               Cow position:
               chrX:16324186-16324007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               151
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               290-474
               

               Cow position:
               chrX:29509667-29509484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               147, 94
               

               Conread position:
               290-513
               

               Cow position:
               chrX:20709848-20710077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               96, 145
               

               Conread position:
               296-466
               

               Cow position:
               chrX:25036918-25036746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 101
               

               Conread position:
               297-474
               

               Cow position:
               chrX:46587599-46587777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               7, 105
               

               Conread position:
               301-474
               

               Cow position:
               chrX:27174782-27174953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               14, 82
               

               Conread position:
               302-474
               

               Cow position:
               chrX:3579735-3579903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               133, 12
               

               Conread position:
               304-474
               

               Cow position:
               chrX:6234657-6234495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               304-475
               

               Cow position:
               chrX:47046729-47046548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               314-473
               

               Cow position:
               chrX:45148975-45149137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               314-474
               

               Cow position:
               chrX:4091448-4091605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               109, 68
               

               Conread position:
               315-474
               

               Cow position:
               chrX:12405575-12405426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               108, 39
               

               Conread position:
               316-474
               

               Cow position:
               chrX:33000706-33000860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               70, 92
               

               Conread position:
               316-482
               

               Cow position:
               chrX:36961438-36961609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               320-467
               

               Cow position:
               chrX:18195748-18195885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               103, 57
               

               Conread position:
               321-473
               

               Cow position:
               chrX:37540932-37541081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               102, 65
               

               Conread position:
               321-474
               

               Cow position:
               chrX:8869601-8869447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               37, 113
               

               Conread position:
               321-475
               

               Cow position:
               chrX:8991695-8991843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               322-513
               

               Cow position:
               chrX:43730406-43730217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               87, 64
               

               Conread position:
               323-474
               

               Cow position:
               chrX:23785463-23785619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               136
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               323-474
               

               Cow position:
               chrX:44657155-44657004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               324-474
               

               Cow position:
               chrX:1505523-1505668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               335-474
               

               Cow position:
               chrX:31252239-31252375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               335-474
               

               Cow position:
               chrX:36060973-36061115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               336-508
               

               Cow position:
               chrX:45936499-45936317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               11, 155
               

               Conread position:
               338-507
               

               Cow position:
               chrX:27145447-27145613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               5, 45
               

               Conread position:
               340-482
               

               Cow position:
               chrX:22387421-22387276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 84
               

               Conread position:
               341-491
               

               Cow position:
               chrX:46433310-46433468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               343-474
               

               Cow position:
               chrX:22921143-22921277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               43, 19
               

               Conread position:
               343-474
               

               Cow position:
               chrX:25208017-25207884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               348-476
               

               Cow position:
               chrX:41992207-41992084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               75, 21
               

               Conread position:
               351-501
               

               Cow position:
               chrX:22454252-22454106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 21
               

               Conread position:
               356-474
               

               Cow position:
               chrX:27227966-27228085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               67, 28
               
Show alignments to all cow chromosomes.
Conread position:	1-139
Cow position:	chrX:1958498-1958357 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	118
Alignm E-value:	9e-34
Alignm gaps (pig, cow):	109, 0
Conread position:	1-170
Cow position:	chrX:28558378-28558547 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	126
Alignm E-value:	9e-24
Alignm gaps (pig, cow):	108, 32
Conread position:	1-171
Cow position:	chrX:39730648-39730477 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	133
Alignm E-value:	6e-31
Alignm gaps (pig, cow):	115, 26
Conread position:	1-172
Cow position:	chrX:12458188-12458362 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	133
Alignm E-value:	7e-32
Alignm gaps (pig, cow):	107, 0
Conread position:	1-173
Cow position:	chrX:5639446-5639271 (view UCSC Genome Browser custom track)
Alignm length:	177
Alignm identity:	138
Alignm E-value:	9e-34
Alignm gaps (pig, cow):	109, 92
Conread position:	1-174
Cow position:	chrX:41527020-41526852 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	132
Alignm E-value:	6e-30
Alignm gaps (pig, cow):	108, 0
Conread position:	1-175
Cow position:	chrX:865887-866063 (view UCSC Genome Browser custom track)
Alignm length:	178
Alignm identity:	132
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	109, 92
Conread position:	1-238
Cow position:	chrX:20954022-20954270 (view UCSC Genome Browser custom track)
Alignm length:	255
Alignm identity:	182
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	109, 13
Conread position:	1-243
Cow position:	chrX:23316929-23316671 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	181
Alignm E-value:	5e-29
Alignm gaps (pig, cow):	105, 0
Conread position:	1-245
Cow position:	chrX:13405806-13405545 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	190
Alignm E-value:	3e-33
Alignm gaps (pig, cow):	109, 92
Conread position:	1-246
Cow position:	chrX:1499079-1499346 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	193
Alignm E-value:	7e-32
Alignm gaps (pig, cow):	109, 92
Conread position:	1-251
Cow position:	chrX:15999987-15999745 (view UCSC Genome Browser custom track)
Alignm length:	253
Alignm identity:	181
Alignm E-value:	3e-33
Alignm gaps (pig, cow):	179, 8
Conread position:	1-254
Cow position:	chrX:323406-323675 (view UCSC Genome Browser custom track)
Alignm length:	271
Alignm identity:	194
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	109, 92
Conread position:	1-258
Cow position:	chrX:5353812-5353539 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	195
Alignm E-value:	9e-34
Alignm gaps (pig, cow):	109, 99
Conread position:	1-262
Cow position:	chrX:23135067-23135344 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	195
Alignm E-value:	6e-31
Alignm gaps (pig, cow):	53, 93
Conread position:	1-263
Cow position:	chrX:45992738-45993018 (view UCSC Genome Browser custom track)
Alignm length:	283
Alignm identity:	206
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	92, 13
Conread position:	1-266
Cow position:	chrX:34990552-34990813 (view UCSC Genome Browser custom track)
Alignm length:	269
Alignm identity:	190
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	108, 21
Conread position:	1-270
Cow position:	chrX:9635762-9635470 (view UCSC Genome Browser custom track)
Alignm length:	295
Alignm identity:	210
Alignm E-value:	7e-32
Alignm gaps (pig, cow):	108, 92
Conread position:	1-282
Cow position:	chrX:21662586-21662884 (view UCSC Genome Browser custom track)
Alignm length:	300
Alignm identity:	220
Alignm E-value:	2.8026e-45
Alignm gaps (pig, cow):	109, 147
Conread position:	1-283
Cow position:	chrX:11855660-11855957 (view UCSC Genome Browser custom track)
Alignm length:	300
Alignm identity:	222
Alignm E-value:	0
Alignm gaps (pig, cow):	108, 92