Cow genome map

Conread name: rmga38_o5.y1

Conread position: 1-284
Cow position:
Alignm length: 299
Alignm identity: 212
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 88, 40

Conread position: 3-158
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 3-184
Cow position:
Alignm length: 185
Alignm identity: 143
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 147, 39

Conread position: 3-208
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 156, 30

Conread position: 3-284
Cow position:
Alignm length: 285
Alignm identity: 196
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 151, 37

Conread position: 3-294
Cow position:
Alignm length: 295
Alignm identity: 211
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 157, 37

Conread position: 3-303
Cow position:
Alignm length: 305
Alignm identity: 216
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 152, 39

Conread position: 3-312
Cow position:
Alignm length: 313
Alignm identity: 218
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 158, 42

Conread position: 3-325
Cow position:
Alignm length: 342
Alignm identity: 234
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 78, 37

Conread position: 3-326
Cow position:
Alignm length: 330
Alignm identity: 236
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 120, 38

Conread position: 3-330
Cow position:
Alignm length: 331
Alignm identity: 236
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 158, 40

Conread position: 3-352
Cow position:
Alignm length: 356
Alignm identity: 239
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 158, 37

Conread position: 3-357
Cow position:
Alignm length: 363
Alignm identity: 251
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 157, 38

Conread position: 3-357
Cow position:
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 30

Conread position: 3-357
Cow position:
Alignm length: 363
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 124, 38

Conread position: 3-361
Cow position:
Alignm length: 365
Alignm identity: 258
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 157, 37

Conread position: 3-362
Cow position:
Alignm length: 368
Alignm identity: 244
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 98, 31

Conread position: 3-364
Cow position:
Alignm length: 377
Alignm identity: 261
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 57, 30

Conread position: 3-364
Cow position:
Alignm length: 366
Alignm identity: 253
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 157, 37

Conread position: 3-364
Cow position:
Alignm length: 374
Alignm identity: 255
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 151, 29

Conread position: 3-364
Cow position:
Alignm length: 369
Alignm identity: 256
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 157, 30

Conread position: 3-364
Cow position:
Alignm length: 371
Alignm identity: 239
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 160, 69

Conread position: 4-315
Cow position:
Alignm length: 315
Alignm identity: 224
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 156, 36

Conread position: 4-362
Cow position:
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 43

Conread position: 4-364
Cow position:
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 38

Conread position: 5-361
Cow position:
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 27

Conread position: 6-364
Cow position:
Alignm length: 363
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 36

Conread position: 10-326
Cow position:
Alignm length: 323
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 30

Conread position: 14-364
Cow position:
Alignm length: 359
Alignm identity: 246
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 18

Conread position: 31-364
Cow position:
Alignm length: 340
Alignm identity: 230
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 132, 43

Conread position: 35-352
Cow position:
Alignm length: 332
Alignm identity: 227
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 88, 29

Conread position: 36-356
Cow position:
Alignm length: 327
Alignm identity: 227
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 226
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 127, 38

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 222
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 124, 41

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 231
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 233
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position:
Alignm length: 334
Alignm identity: 231
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 124, 40

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 233
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 233
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 127, 38

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 232
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 235
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position:
Alignm length: 334
Alignm identity: 235
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 124, 38

Conread position: 37-361
Cow position:
Alignm length: 331
Alignm identity: 228
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 124, 37

Conread position: 37-364
Cow position:
Alignm length: 334
Alignm identity: 236
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 123, 28

Conread position: 47-356
Cow position:
Alignm length: 319
Alignm identity: 211
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 26, 155

Conread position: 62-329
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 46, 147

Conread position: 62-364
Cow position:
Alignm length: 313
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 29

Conread position: 62-364
Cow position:
Alignm length: 308
Alignm identity: 223
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 98, 21

Conread position: 66-326
Cow position:
Alignm length: 263
Alignm identity: 183
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 91

Conread position: 68-361
Cow position:
Alignm length: 305
Alignm identity: 209
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 92, 24

Conread position: 70-265
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 57

Conread position: 70-270
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 102

Conread position: 70-323
Cow position:
Alignm length: 257
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 120

Conread position: 70-328
Cow position:
Alignm length: 263
Alignm identity: 172
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 87, 119

Conread position: 70-356
Cow position:
Alignm length: 293
Alignm identity: 209
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 93, 122

Conread position: 70-356
Cow position:
Alignm length: 293
Alignm identity: 200
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 90, 120

Conread position: 70-356
Cow position:
Alignm length: 292
Alignm identity: 207
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 90, 34

Conread position: 70-358
Cow position:
Alignm length: 294
Alignm identity: 189
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 110

Conread position: 70-360
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 123

Conread position: 70-361
Cow position:
Alignm length: 298
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 123

Conread position: 70-361
Cow position:
Alignm length: 295
Alignm identity: 206
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 265, 91

Conread position: 70-361
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 90, 123

Conread position: 70-362
Cow position:
Alignm length: 300
Alignm identity: 217
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 90, 21

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 93, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 93, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 208
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 90, 127

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 206
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 212
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 209
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 93, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 298
Alignm identity: 211
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 154, 73

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 93, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 206
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 26

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 90, 125

Conread position: 70-364
Cow position:
Alignm length: 298
Alignm identity: 206
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 262, 91

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 205
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 50

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 206
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 90, 50

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 93, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 207
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 90, 107

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 215
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 90, 19

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 212
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 93, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 90, 123

Conread position: 72-356
Cow position:
Alignm length: 293
Alignm identity: 208
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 88, 132

Conread position: 72-359
Cow position:
Alignm length: 295
Alignm identity: 207
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 87, 51

Conread position: 72-361
Cow position:
Alignm length: 293
Alignm identity: 206
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 260, 89

Conread position: 72-362
Cow position:
Alignm length: 300
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 125

Conread position: 72-364
Cow position:
Alignm length: 299
Alignm identity: 209
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 88, 118

Conread position: 72-364
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 10, 120

Conread position: 73-364
Cow position:
Alignm length: 298
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 87, 120

Conread position: 74-355
Cow position:
Alignm length: 294
Alignm identity: 214
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 10, 133

Conread position: 76-356
Cow position:
Alignm length: 288
Alignm identity: 202
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 84, 119

Conread position: 76-356
Cow position:
Alignm length: 287
Alignm identity: 202
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 83, 98

Conread position: 76-358
Cow position:
Alignm length: 288
Alignm identity: 192
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 68, 86

Conread position: 76-364
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 84, 117

Conread position: 76-364
Cow position:
Alignm length: 304
Alignm identity: 214
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 76-364
Cow position:
Alignm length: 295
Alignm identity: 213
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 80, 12

Conread position: 77-319
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 83, 33

Conread position: 78-350
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 76, 14

Conread position: 79-314
Cow position:
Alignm length: 242
Alignm identity: 171
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 81, 27

Conread position: 80-356
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 80, 113

Conread position: 80-364
Cow position:
Alignm length: 292
Alignm identity: 210
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 80, 113

Conread position: 81-364
Cow position:
Alignm length: 291
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 79, 114

Conread position: 87-360
Cow position:
Alignm length: 279
Alignm identity: 192
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 67, 85

Conread position: 88-271
Cow position:
Alignm length: 188
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 72, 110

Conread position: 88-364
Cow position:
Alignm length: 283
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 73, 101

Conread position: 90-303
Cow position:
Alignm length: 218
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 108

Conread position: 90-355
Cow position:
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 38

Conread position: 91-306
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 69, 103

Conread position: 91-355
Cow position:
Alignm length: 271
Alignm identity: 190
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 69, 54

Conread position: 91-364
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 69, 103

Conread position: 92-363
Cow position:
Alignm length: 276
Alignm identity: 179
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 78

Conread position: 100-357
Cow position:
Alignm length: 264
Alignm identity: 189
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 61, 116

Conread position: 104-306
Cow position:
Alignm length: 203
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 120-364
Cow position:
Alignm length: 252
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 83

Conread position: 126-364
Cow position:
Alignm length: 242
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 206, 35

Conread position: 127-364
Cow position:
Alignm length: 248
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 53

Conread position: 140-364
Cow position:
Alignm length: 233
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 142-364
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 192, 6

Conread position: 169-364
Cow position:
Alignm length: 200
Alignm identity: 142
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 105, 45

Conread position: 172-364
Cow position:
Alignm length: 193
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 181-364
Cow position:
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 15

Conread position: 186-364
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 145, 31

Conread position: 190-364
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 6, 29

Conread position: 194-364
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 211-364
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 77

Conread position: 217-364
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Show alignments to all cow chromosomes.