Cow genome map

Conread name: rmga38_o5.y1

Conread position: 1-267
Cow position:
Alignm length: 270
Alignm identity: 195
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 159, 40

Conread position: 1-355
Cow position:
Alignm length: 377
Alignm identity: 258
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 103, 39

Conread position: 1-364
Cow position:
Alignm length: 370
Alignm identity: 256
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 158, 40

Conread position: 3-151
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 87, 41

Conread position: 3-154
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 57, 27

Conread position: 3-184
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 151, 38

Conread position: 3-193
Cow position:
Alignm length: 194
Alignm identity: 144
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 155, 38

Conread position: 3-199
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 38

Conread position: 3-207
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 157, 30

Conread position: 3-214
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 157, 38

Conread position: 3-249
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 157, 38

Conread position: 3-255
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 111, 18

Conread position: 3-280
Cow position:
Alignm length: 281
Alignm identity: 193
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 147, 38

Conread position: 3-283
Cow position:
Alignm length: 288
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 38

Conread position: 3-303
Cow position:
Alignm length: 304
Alignm identity: 206
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 157, 38

Conread position: 3-319
Cow position:
Alignm length: 319
Alignm identity: 222
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 160, 38

Conread position: 3-352
Cow position:
Alignm length: 357
Alignm identity: 237
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 151, 39

Conread position: 3-356
Cow position:
Alignm length: 360
Alignm identity: 256
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 157, 32

Conread position: 3-356
Cow position:
Alignm length: 356
Alignm identity: 250
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 152, 30

Conread position: 3-361
Cow position:
Alignm length: 365
Alignm identity: 257
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 157, 30

Conread position: 3-361
Cow position:
Alignm length: 362
Alignm identity: 254
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 157, 18

Conread position: 3-361
Cow position:
Alignm length: 366
Alignm identity: 259
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 151, 38

Conread position: 3-362
Cow position:
Alignm length: 373
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 30

Conread position: 3-364
Cow position:
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 71

Conread position: 3-364
Cow position:
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 38

Conread position: 3-364
Cow position:
Alignm length: 369
Alignm identity: 246
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 149, 37

Conread position: 3-364
Cow position:
Alignm length: 368
Alignm identity: 253
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 156, 40

Conread position: 3-364
Cow position:
Alignm length: 371
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 29

Conread position: 3-364
Cow position:
Alignm length: 377
Alignm identity: 262
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 77, 38

Conread position: 3-364
Cow position:
Alignm length: 368
Alignm identity: 250
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 223, 37

Conread position: 3-364
Cow position:
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 44

Conread position: 3-364
Cow position:
Alignm length: 377
Alignm identity: 258
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 80, 37

Conread position: 4-174
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 150, 37

Conread position: 4-220
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 150, 37

Conread position: 4-286
Cow position:
Alignm length: 286
Alignm identity: 203
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 156, 36

Conread position: 5-158
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 75, 35

Conread position: 5-158
Cow position:
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 36

Conread position: 5-263
Cow position:
Alignm length: 263
Alignm identity: 192
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 155, 29

Conread position: 5-356
Cow position:
Alignm length: 358
Alignm identity: 252
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 155, 28

Conread position: 6-271
Cow position:
Alignm length: 266
Alignm identity: 193
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 7-364
Cow position:
Alignm length: 365
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 153, 67

Conread position: 12-303
Cow position:
Alignm length: 295
Alignm identity: 200
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 153, 29

Conread position: 12-333
Cow position:
Alignm length: 326
Alignm identity: 233
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 142, 12

Conread position: 15-351
Cow position:
Alignm length: 341
Alignm identity: 225
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 148, 24

Conread position: 15-355
Cow position:
Alignm length: 348
Alignm identity: 246
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 139, 26

Conread position: 21-356
Cow position:
Alignm length: 342
Alignm identity: 237
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 139, 9

Conread position: 31-364
Cow position:
Alignm length: 340
Alignm identity: 236
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 129, 43

Conread position: 31-364
Cow position:
Alignm length: 340
Alignm identity: 230
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 132, 43

Conread position: 31-364
Cow position:
Alignm length: 342
Alignm identity: 241
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 123, 43

Conread position: 34-289
Cow position:
Alignm length: 259
Alignm identity: 184
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 126, 40

Conread position: 36-318
Cow position:
Alignm length: 288
Alignm identity: 193
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 161, 39

Conread position: 36-362
Cow position:
Alignm length: 333
Alignm identity: 237
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 124, 25

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 234
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 124, 38

Conread position: 37-364
Cow position:
Alignm length: 348
Alignm identity: 236
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 164

Conread position: 42-363
Cow position:
Alignm length: 327
Alignm identity: 220
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 98, 25

Conread position: 51-364
Cow position:
Alignm length: 321
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 143

Conread position: 62-310
Cow position:
Alignm length: 251
Alignm identity: 173
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 20, 133

Conread position: 62-361
Cow position:
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 153

Conread position: 62-364
Cow position:
Alignm length: 313
Alignm identity: 227
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 21, 137

Conread position: 62-364
Cow position:
Alignm length: 308
Alignm identity: 210
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 63, 57

Conread position: 62-364
Cow position:
Alignm length: 309
Alignm identity: 223
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 92, 57

Conread position: 68-294
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 92, 126

Conread position: 68-361
Cow position:
Alignm length: 297
Alignm identity: 200
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 259, 93

Conread position: 68-364
Cow position:
Alignm length: 303
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 92, 125

Conread position: 68-364
Cow position:
Alignm length: 305
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 51

Conread position: 70-269
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 90, 120

Conread position: 70-278
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 49

Conread position: 70-326
Cow position:
Alignm length: 261
Alignm identity: 191
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 91, 120

Conread position: 70-330
Cow position:
Alignm length: 264
Alignm identity: 178
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 93, 123

Conread position: 70-356
Cow position:
Alignm length: 293
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 90, 123

Conread position: 70-361
Cow position:
Alignm length: 298
Alignm identity: 213
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 90, 125

Conread position: 70-361
Cow position:
Alignm length: 302
Alignm identity: 213
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 89, 124

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 91, 123

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 212
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 300
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 90, 125

Conread position: 70-364
Cow position:
Alignm length: 299
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 85, 105

Conread position: 70-364
Cow position:
Alignm length: 298
Alignm identity: 205
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 90, 125

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 213
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 203
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 90, 54

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 303
Alignm identity: 217
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 95, 124

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 93, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 93, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 90, 121

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 91, 124

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 209
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 90, 124

Conread position: 70-364
Cow position:
Alignm length: 309
Alignm identity: 211
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 192, 58

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 215
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 93, 120

Conread position: 70-364
Cow position:
Alignm length: 300
Alignm identity: 211
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 90, 32

Conread position: 71-294
Cow position:
Alignm length: 227
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 119

Conread position: 71-302
Cow position:
Alignm length: 235
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 145

Conread position: 71-364
Cow position:
Alignm length: 302
Alignm identity: 196
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 122

Conread position: 71-364
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 81, 17

Conread position: 71-364
Cow position:
Alignm length: 300
Alignm identity: 211
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 89, 122

Conread position: 72-356
Cow position:
Alignm length: 296
Alignm identity: 211
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 91, 118

Conread position: 72-357
Cow position:
Alignm length: 294
Alignm identity: 219
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 12, 119

Conread position: 72-361
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 10, 119

Conread position: 72-364
Cow position:
Alignm length: 295
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 266, 89

Conread position: 74-358
Cow position:
Alignm length: 287
Alignm identity: 184
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 109, 85

Conread position: 74-361
Cow position:
Alignm length: 292
Alignm identity: 199
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 86, 50

Conread position: 74-364
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 86, 122

Conread position: 76-284
Cow position:
Alignm length: 215
Alignm identity: 167
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 78, 0

Conread position: 76-354
Cow position:
Alignm length: 287
Alignm identity: 208
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 77, 44

Conread position: 76-357
Cow position:
Alignm length: 287
Alignm identity: 195
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 8

Conread position: 76-361
Cow position:
Alignm length: 287
Alignm identity: 190
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 89, 69

Conread position: 76-364
Cow position:
Alignm length: 295
Alignm identity: 205
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 84, 7

Conread position: 76-364
Cow position:
Alignm length: 299
Alignm identity: 199
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 58

Conread position: 78-312
Cow position:
Alignm length: 241
Alignm identity: 172
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 44

Conread position: 79-361
Cow position:
Alignm length: 289
Alignm identity: 199
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 140, 33

Conread position: 81-364
Cow position:
Alignm length: 287
Alignm identity: 201
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 79, 108

Conread position: 81-364
Cow position:
Alignm length: 289
Alignm identity: 207
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 79, 113

Conread position: 86-301
Cow position:
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 75, 108

Conread position: 88-352
Cow position:
Alignm length: 272
Alignm identity: 194
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 105

Conread position: 88-354
Cow position:
Alignm length: 272
Alignm identity: 186
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 133

Conread position: 88-364
Cow position:
Alignm length: 284
Alignm identity: 206
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 72, 103

Conread position: 88-364
Cow position:
Alignm length: 285
Alignm identity: 197
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 72, 111

Conread position: 89-356
Cow position:
Alignm length: 275
Alignm identity: 196
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 8, 86

Conread position: 92-356
Cow position:
Alignm length: 269
Alignm identity: 184
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 68, 107

Conread position: 92-357
Cow position:
Alignm length: 273
Alignm identity: 190
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 68, 98

Conread position: 92-364
Cow position:
Alignm length: 276
Alignm identity: 185
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 134, 68

Conread position: 93-364
Cow position:
Alignm length: 278
Alignm identity: 185
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 89, 46

Conread position: 93-364
Cow position:
Alignm length: 278
Alignm identity: 192
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 66, 97

Conread position: 94-364
Cow position:
Alignm length: 276
Alignm identity: 197
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 66, 11

Conread position: 95-361
Cow position:
Alignm length: 271
Alignm identity: 175
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 68, 98

Conread position: 112-362
Cow position:
Alignm length: 260
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 21

Conread position: 120-294
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 33, 83

Conread position: 120-364
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 43, 71

Conread position: 120-364
Cow position:
Alignm length: 252
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 73

Conread position: 127-364
Cow position:
Alignm length: 244
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 63

Conread position: 129-364
Cow position:
Alignm length: 242
Alignm identity: 169
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 32, 61

Conread position: 145-364
Cow position:
Alignm length: 223
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 187, 45

Conread position: 145-364
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 58

Conread position: 148-364
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 182, 48

Conread position: 154-345
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 180, 40

Conread position: 190-364
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 194-353
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 31, 156

Conread position: 222-361
Cow position:
Alignm length: 143
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 110, 0

Conread position: 222-364
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 230-361
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 237-364
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 0

Show alignments to all cow chromosomes.