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Cow genome map

           
Conread name:
           
rmga38_o5.y1
        

               
Conread position:
               
1-187
               

               
Cow position:
               
chr22:27066158-27065979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
157, 40
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr22:31870451-31870782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
159, 31
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr22:1986808-1986473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
157, 32
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr22:19592213-19591856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 40
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr22:12868248-12868598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 28
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr22:22155399-22155052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
159, 39
               

               
Conread position:
               
2-352
               

               
Cow position:
               
chr22:898554-898226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
159, 39
               

               
Conread position:
               
3-157
               

               
Cow position:
               
chr22:28120588-28120444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
3-176
               

               
Cow position:
               
chr22:35382455-35382634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 37
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr22:19787883-19788064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
157, 37
               

               
Conread position:
               
3-200
               

               
Cow position:
               
chr22:8481444-8481255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
157, 38
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr22:23176653-23176868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
160, 39
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr22:12315343-12315140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
154, 39
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr22:27514460-27514211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
157, 37
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr22:11987420-11987667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
157, 38
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr22:11489340-11489056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
157, 41
               

               
Conread position:
               
3-320
               

               
Cow position:
               
chr22:13011480-13011771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
157, 38
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr22:18259025-18258712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
150, 38
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr22:25246706-25246378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
158, 27
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr22:10302807-10302486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
156, 38
               

               
Conread position:
               
3-351
               

               
Cow position:
               
chr22:39494406-39494731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
137, 32
               

               
Conread position:
               
3-352
               

               
Cow position:
               
chr22:25943278-25942944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
151, 38
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr22:25206173-25206513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 42
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr22:27818800-27818458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
157, 27
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr22:43788332-43788678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
151, 39
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr22:27433586-27433928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
172, 37
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr22:36539876-36540222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
87, 28
               

               
Conread position:
               
3-362
               

               
Cow position:
               
chr22:26184364-26184716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 37
               

               
Conread position:
               
3-362
               

               
Cow position:
               
chr22:39452385-39452013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 79
               

               
Conread position:
               
3-362
               

               
Cow position:
               
chr22:42605429-42605085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 38
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr22:4138310-4138656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
157, 28
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr22:5282304-5281957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 38
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr22:8412321-8411976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
156, 38
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr22:8842108-8841757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
158, 38
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr22:13235345-13234986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 216
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr22:19340996-19340654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
157, 30
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr22:22968028-22967682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr22:26081102-26081453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
28, 39
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr22:33094358-33094011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
21, 38
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr22:39472579-39472923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
151, 30
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr22:40374403-40374053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
160, 32
               

               
Conread position:
               
4-269
               

               
Cow position:
               
chr22:10065100-10065363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
50, 43
               

               
Conread position:
               
4-324
               

               
Cow position:
               
chr22:5467573-5467875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
156, 37
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr22:41045118-41045456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 37
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr22:1484658-1484321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
152, 29
               

               
Conread position:
               
4-357
               

               
Cow position:
               
chr22:31497307-31497651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 38
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr22:8283777-8283436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
156, 36
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr22:6721271-6721620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
156, 17
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr22:12388147-12387802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
156, 37
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr22:36193657-36193319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
330, 36
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr22:42933692-42934044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 37
               

               
Conread position:
               
6-271
               

               
Cow position:
               
chr22:34476207-34476455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
154, 37
               

               
Conread position:
               
6-278
               

               
Cow position:
               
chr22:27322112-27321856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
148, 34
               

               
Conread position:
               
6-336
               

               
Cow position:
               
chr22:14376599-14376911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
153, 35
               

               
Conread position:
               
12-286
               

               
Cow position:
               
chr22:23741916-23742170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
142, 29
               

               
Conread position:
               
12-301
               

               
Cow position:
               
chr22:18926139-18925869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
140, 28
               

               
Conread position:
               
12-356
               

               
Cow position:
               
chr22:13695626-13695956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
149, 29
               

               
Conread position:
               
12-364
               

               
Cow position:
               
chr22:5337810-5338148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
148, 30
               

               
Conread position:
               
14-364
               

               
Cow position:
               
chr22:18021233-18021566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
146, 45
               

               
Conread position:
               
15-330
               

               
Cow position:
               
chr22:31213358-31213057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
146, 28
               

               
Conread position:
               
23-364
               

               
Cow position:
               
chr22:15068187-15067862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
27-330
               

               
Cow position:
               
chr22:5363965-5364251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
133, 14
               

               
Conread position:
               
31-364
               

               
Cow position:
               
chr22:15538116-15537795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
129, 43
               

               
Conread position:
               
31-364
               

               
Cow position:
               
chr22:43948868-43949185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
31-364
               

               
Cow position:
               
chr22:44936950-44936623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
299, 51
               

               
Conread position:
               
34-364
               

               
Cow position:
               
chr22:6755179-6755496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
126, 42
               

               
Conread position:
               
34-364
               

               
Cow position:
               
chr22:6756540-6756858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
126, 42
               

               
Conread position:
               
35-308
               

               
Cow position:
               
chr22:46351595-46351872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
36-291
               

               
Cow position:
               
chr22:1274396-1274636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 28
               

               
Conread position:
               
36-364
               

               
Cow position:
               
chr22:3274369-3274685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
36-364
               

               
Cow position:
               
chr22:10906216-10906536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
36-364
               

               
Cow position:
               
chr22:11128077-11127760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
36-364
               

               
Cow position:
               
chr22:27285425-27285110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
127, 38
               

               
Conread position:
               
36-364
               

               
Cow position:
               
chr22:36327240-36326927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
36-364
               

               
Cow position:
               
chr22:36439544-36439860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
36-364
               

               
Cow position:
               
chr22:44365220-44365536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
37-309
               

               
Cow position:
               
chr22:321714-321978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
123, 40
               

               
Conread position:
               
37-356
               

               
Cow position:
               
chr22:6925010-6924702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
295, 39
               

               
Conread position:
               
38-361
               

               
Cow position:
               
chr22:31316529-31316216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
123, 28
               

               
Conread position:
               
52-364
               

               
Cow position:
               
chr22:39038394-39038704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 28
               

               
Conread position:
               
56-364
               

               
Cow position:
               
chr22:23618533-23618843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
98, 22
               

               
Conread position:
               
59-364
               

               
Cow position:
               
chr22:28939516-28939216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
101, 11
               

               
Conread position:
               
61-362
               

               
Cow position:
               
chr22:45290939-45290632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
23, 163
               

               
Conread position:
               
62-278
               

               
Cow position:
               
chr22:45272557-45272346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
161, 18
               

               
Conread position:
               
62-364
               

               
Cow position:
               
chr22:7102330-7102032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
62-364
               

               
Cow position:
               
chr22:27791185-27790881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 138
               

               
Conread position:
               
64-364
               

               
Cow position:
               
chr22:13210347-13210046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
18, 50
               

               
Conread position:
               
64-364
               

               
Cow position:
               
chr22:34886383-34886081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
95, 153
               

               
Conread position:
               
68-269
               

               
Cow position:
               
chr22:25784827-25785027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
91, 11
               

               
Conread position:
               
68-322
               

               
Cow position:
               
chr22:15568301-15568556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
68-353
               

               
Cow position:
               
chr22:17922633-17922914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 100
               

               
Conread position:
               
68-364
               

               
Cow position:
               
chr22:21593374-21593082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
92, 125
               

               
Conread position:
               
68-364
               

               
Cow position:
               
chr22:42499404-42499693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
92, 56
               

               
Conread position:
               
69-364
               

               
Cow position:
               
chr22:42681863-42682144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
90, 98
               

               
Conread position:
               
70-293
               

               
Cow position:
               
chr22:18335079-18335295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
70-301
               

               
Cow position:
               
chr22:44463271-44463047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 120
               

               
Conread position:
               
70-306
               

               
Cow position:
               
chr22:24082685-24082922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
90, 49
               

               
Conread position:
               
70-307
               

               
Cow position:
               
chr22:37730644-37730404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
70-330
               

               
Cow position:
               
chr22:12889682-12889934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
84, 122
               

               
Conread position:
               
70-330
               

               
Cow position:
               
chr22:19241449-19241702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-330
               

               
Cow position:
               
chr22:33798044-33798308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 49
               

               
Conread position:
               
70-351
               

               
Cow position:
               
chr22:26785881-26785601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
12, 129
               

               
Conread position:
               
70-352
               

               
Cow position:
               
chr22:25658795-25659071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
91, 124
               

               
Conread position:
               
70-354
               

               
Cow position:
               
chr22:17324539-17324819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
90, 124
               

               
Conread position:
               
70-356
               

               
Cow position:
               
chr22:2669185-2668903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-356
               

               
Cow position:
               
chr22:6285768-6286050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
91, 123
               

               
Conread position:
               
70-356
               

               
Cow position:
               
chr22:8644340-8644058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
90, 120
               

               
Conread position:
               
70-356
               

               
Cow position:
               
chr22:19599840-19600119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
90, 121
               

               
Conread position:
               
70-356
               

               
Cow position:
               
chr22:20236611-20236892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
70-356
               

               
Cow position:
               
chr22:37137627-37137346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 121
               

               
Conread position:
               
70-356
               

               
Cow position:
               
chr22:41845608-41845890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
90, 120
               

               
Conread position:
               
70-357
               

               
Cow position:
               
chr22:39255139-39254858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
93, 119
               

               
Conread position:
               
70-361
               

               
Cow position:
               
chr22:15307998-15308285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
84, 123
               

               
Conread position:
               
70-361
               

               
Cow position:
               
chr22:18523422-18523698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
262, 91
               

               
Conread position:
               
70-361
               

               
Cow position:
               
chr22:32153014-32153306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
91, 42
               

               
Conread position:
               
70-361
               

               
Cow position:
               
chr22:34172414-34172127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-361
               

               
Cow position:
               
chr22:37289893-37290178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 38
               

               
Conread position:
               
70-361
               

               
Cow position:
               
chr22:39033310-39033023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
90, 124
               

               
Conread position:
               
70-362
               

               
Cow position:
               
chr22:7288212-7287921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
70-362
               

               
Cow position:
               
chr22:37214951-37214652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 126
               

               
Conread position:
               
70-363
               

               
Cow position:
               
chr22:19481653-19481363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
69, 65
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:102886-102596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:3809030-3808740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
93, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:3942022-3941731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
90, 121
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:5930368-5930658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
89, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:6340614-6340320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
18, 127
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:7303531-7303821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:8418208-8417923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 118
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:8773043-8773333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:9270163-9269873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
90, 120
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:9685760-9685473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
90, 76
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:10550839-10550549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
89, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:10578712-10578421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
90, 120
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:10596493-10596203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:11231334-11231624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 120
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:11613168-11612878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
89, 121
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:11697677-11697971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
153, 91
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:15729854-15729564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 120
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:32709649-32709939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:35640138-35639848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:36358154-36357864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 120
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:36857613-36857901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:37535363-37535653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:39464576-39464866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
90, 120
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:39708192-39707903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
90, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:41353336-41353630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 101
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:46566011-46566301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
93, 123
               

               
Conread position:
               
70-364
               

               
Cow position:
               
chr22:46582695-46582985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
93, 123
               

               
Conread position:
               
71-329
               

               
Cow position:
               
chr22:14894404-14894156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
90, 31
               

               
Conread position:
               
71-361
               

               
Cow position:
               
chr22:12224945-12225231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
83, 119
               

               
Conread position:
               
71-364
               

               
Cow position:
               
chr22:27306014-27306290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
89, 6
               

               
Conread position:
               
72-327
               

               
Cow position:
               
chr22:25456994-25456739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
155, 45
               

               
Conread position:
               
72-352
               

               
Cow position:
               
chr22:33415273-33415537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
262, 11
               

               
Conread position:
               
72-363
               

               
Cow position:
               
chr22:24630862-24630564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
72-363
               

               
Cow position:
               
chr22:30573390-30573678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
72-364
               

               
Cow position:
               
chr22:3332605-3332314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
81, 16
               

               
Conread position:
               
72-364
               

               
Cow position:
               
chr22:18807284-18807567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
88, 121
               

               
Conread position:
               
72-364
               

               
Cow position:
               
chr22:18810964-18811247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
88, 121
               

               
Conread position:
               
72-364
               

               
Cow position:
               
chr22:29398042-29397754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
260, 89
               

               
Conread position:
               
72-364
               

               
Cow position:
               
chr22:29553213-29553500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
72-364
               

               
Cow position:
               
chr22:34902746-34902456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
87, 123
               

               
Conread position:
               
74-361
               

               
Cow position:
               
chr22:46439365-46439652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
8, 124
               

               
Conread position:
               
74-364
               

               
Cow position:
               
chr22:7231892-7231605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
125, 87
               

               
Conread position:
               
74-364
               

               
Cow position:
               
chr22:18233828-18233541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
10, 121
               

               
Conread position:
               
74-364
               

               
Cow position:
               
chr22:41407509-41407798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
99, 68
               

               
Conread position:
               
76-354
               

               
Cow position:
               
chr22:26322178-26321891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
76-356
               

               
Cow position:
               
chr22:41469674-41469954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
224, 139
               

               
Conread position:
               
76-364
               

               
Cow position:
               
chr22:1591988-1591705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
84, 117
               

               
Conread position:
               
76-364
               

               
Cow position:
               
chr22:5316180-5315895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
84, 117
               

               
Conread position:
               
76-364
               

               
Cow position:
               
chr22:22048243-22048527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
84, 117
               

               
Conread position:
               
76-364
               

               
Cow position:
               
chr22:28144150-28144441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 121
               

               
Conread position:
               
77-356
               

               
Cow position:
               
chr22:23861462-23861728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
17, 7
               

               
Conread position:
               
79-343
               

               
Cow position:
               
chr22:30269073-30268814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
70, 118
               

               
Conread position:
               
81-364
               

               
Cow position:
               
chr22:33196317-33196596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 112
               

               
Conread position:
               
83-315
               

               
Cow position:
               
chr22:16686634-16686409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
84-364
               

               
Cow position:
               
chr22:28786060-28785785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
76, 109
               

               
Conread position:
               
86-293
               

               
Cow position:
               
chr22:11365672-11365872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
86-358
               

               
Cow position:
               
chr22:19655912-19656180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
74, 12
               

               
Conread position:
               
86-360
               

               
Cow position:
               
chr22:31417457-31417183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
86-361
               

               
Cow position:
               
chr22:23581859-23582136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 112
               

               
Conread position:
               
86-364
               

               
Cow position:
               
chr22:36546412-36546684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
88-322
               

               
Cow position:
               
chr22:17059841-17059613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 106
               

               
Conread position:
               
89-271
               

               
Cow position:
               
chr22:14986316-14986491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 107
               

               
Conread position:
               
89-294
               

               
Cow position:
               
chr22:36815207-36815410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
89-364
               

               
Cow position:
               
chr22:19139763-19140034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 104
               

               
Conread position:
               
89-364
               

               
Cow position:
               
chr22:21958082-21957802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
28, 135
               

               
Conread position:
               
90-356
               

               
Cow position:
               
chr22:2560530-2560793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
70, 100
               

               
Conread position:
               
90-364
               

               
Cow position:
               
chr22:9466258-9465984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
90-364
               

               
Cow position:
               
chr22:30819004-30819273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
71, 104
               

               
Conread position:
               
90-364
               

               
Cow position:
               
chr22:31700391-31700662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
175, 31
               

               
Conread position:
               
92-278
               

               
Cow position:
               
chr22:18608539-18608727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
68, 104
               

               
Conread position:
               
92-363
               

               
Cow position:
               
chr22:7170155-7169881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
66, 47
               

               
Conread position:
               
92-363
               

               
Cow position:
               
chr22:11969392-11969662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
68, 98
               

               
Conread position:
               
95-364
               

               
Cow position:
               
chr22:36587232-36587498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
65, 99
               

               
Conread position:
               
101-356
               

               
Cow position:
               
chr22:12630913-12631170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
53, 5
               

               
Conread position:
               
106-364
               

               
Cow position:
               
chr22:26088324-26088577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 5
               

               
Conread position:
               
107-356
               

               
Cow position:
               
chr22:4945031-4944785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
53, 5
               

               
Conread position:
               
111-329
               

               
Cow position:
               
chr22:6245439-6245218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
119-364
               

               
Cow position:
               
chr22:19169336-19169097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
122-291
               

               
Cow position:
               
chr22:31513468-31513637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 96
               

               
Conread position:
               
122-315
               

               
Cow position:
               
chr22:37828468-37828276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 45
               

               
Conread position:
               
125-356
               

               
Cow position:
               
chr22:19016776-19017016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
127-364
               

               
Cow position:
               
chr22:1521569-1521801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
130-357
               

               
Cow position:
               
chr22:31632593-31632823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
131-364
               

               
Cow position:
               
chr22:59087-58858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
138-364
               

               
Cow position:
               
chr22:33386722-33386948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
143-362
               

               
Cow position:
               
chr22:27223001-27223222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
149-330
               

               
Cow position:
               
chr22:33221762-33221578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
149-364
               

               
Cow position:
               
chr22:26506880-26507094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
188, 66
               

               
Conread position:
               
155-361
               

               
Cow position:
               
chr22:799741-799541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
151, 32
               

               
Conread position:
               
159-364
               

               
Cow position:
               
chr22:37030100-37030301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
64, 5
               

               
Conread position:
               
169-364
               

               
Cow position:
               
chr22:5623777-5623970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
161, 27
               

               
Conread position:
               
200-364
               

               
Cow position:
               
chr22:43044649-43044812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
135, 18
               

               
Conread position:
               
203-364
               

               
Cow position:
               
chr22:15933999-15934161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
208-361
               

               
Cow position:
               
chr22:13187092-13186937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
216-356
               

               
Cow position:
               
chr22:31593441-31593584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 137
               

               
Conread position:
               
217-353
               

               
Cow position:
               
chr22:8340637-8340497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
217-356
               

               
Cow position:
               
chr22:15058265-15058122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
217-357
               

               
Cow position:
               
chr22:4291323-4291181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
217-364
               

               
Cow position:
               
chr22:28130562-28130411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
217-364
               

               
Cow position:
               
chr22:37829494-37829644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
9, 64
               

               
Conread position:
               
217-364
               

               
Cow position:
               
chr22:42995214-42995063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
218-364
               

               
Cow position:
               
chr22:11386191-11386043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
112, 7
               

               
Conread position:
               
222-364
               

               
Cow position:
               
chr22:13897451-13897306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
231-364
               

               
Cow position:
               
chr22:8099734-8099869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 6
               
Show alignments to all cow chromosomes.