Cow genome map

Conread name: rmga38_o5.y1

Conread position: 1-307
Cow position:
Alignm length: 316
Alignm identity: 206
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 83, 48

Conread position: 1-351
Cow position:
Alignm length: 367
Alignm identity: 254
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 158, 29

Conread position: 3-184
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 157, 30

Conread position: 3-185
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 151, 38

Conread position: 3-249
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 150, 29

Conread position: 3-260
Cow position:
Alignm length: 262
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 157, 37

Conread position: 3-311
Cow position:
Alignm length: 310
Alignm identity: 219
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 220, 38

Conread position: 3-327
Cow position:
Alignm length: 328
Alignm identity: 221
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 157, 30

Conread position: 3-330
Cow position:
Alignm length: 329
Alignm identity: 227
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 223, 38

Conread position: 3-350
Cow position:
Alignm length: 353
Alignm identity: 242
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 116, 37

Conread position: 3-352
Cow position:
Alignm length: 363
Alignm identity: 253
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 65, 37

Conread position: 3-352
Cow position:
Alignm length: 355
Alignm identity: 241
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 160, 28

Conread position: 3-356
Cow position:
Alignm length: 360
Alignm identity: 247
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 156, 32

Conread position: 3-361
Cow position:
Alignm length: 366
Alignm identity: 235
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 166, 38

Conread position: 3-361
Cow position:
Alignm length: 362
Alignm identity: 257
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 327, 39

Conread position: 3-364
Cow position:
Alignm length: 368
Alignm identity: 258
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 156, 38

Conread position: 3-364
Cow position:
Alignm length: 366
Alignm identity: 256
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 264, 38

Conread position: 3-364
Cow position:
Alignm length: 369
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 37

Conread position: 3-364
Cow position:
Alignm length: 369
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 38

Conread position: 3-364
Cow position:
Alignm length: 379
Alignm identity: 262
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 39

Conread position: 3-364
Cow position:
Alignm length: 369
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 38

Conread position: 4-354
Cow position:
Alignm length: 358
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 36

Conread position: 4-357
Cow position:
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 72

Conread position: 4-364
Cow position:
Alignm length: 367
Alignm identity: 252
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 156, 28

Conread position: 4-364
Cow position:
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 11

Conread position: 4-364
Cow position:
Alignm length: 367
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 37

Conread position: 4-364
Cow position:
Alignm length: 372
Alignm identity: 244
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 115, 37

Conread position: 5-304
Cow position:
Alignm length: 306
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 145, 38

Conread position: 5-352
Cow position:
Alignm length: 359
Alignm identity: 249
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 54, 25

Conread position: 5-361
Cow position:
Alignm length: 366
Alignm identity: 252
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 58, 26

Conread position: 6-325
Cow position:
Alignm length: 325
Alignm identity: 227
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 154, 33

Conread position: 12-323
Cow position:
Alignm length: 317
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 29

Conread position: 12-356
Cow position:
Alignm length: 351
Alignm identity: 246
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 147, 22

Conread position: 14-362
Cow position:
Alignm length: 357
Alignm identity: 253
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 111, 26

Conread position: 14-364
Cow position:
Alignm length: 356
Alignm identity: 247
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 146, 29

Conread position: 29-364
Cow position:
Alignm length: 342
Alignm identity: 233
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 130, 45

Conread position: 30-361
Cow position:
Alignm length: 340
Alignm identity: 230
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 46

Conread position: 31-311
Cow position:
Alignm length: 291
Alignm identity: 207
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 73, 30

Conread position: 33-363
Cow position:
Alignm length: 344
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 18

Conread position: 35-364
Cow position:
Alignm length: 334
Alignm identity: 224
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 119, 39

Conread position: 36-356
Cow position:
Alignm length: 327
Alignm identity: 222
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 124, 38

Conread position: 36-361
Cow position:
Alignm length: 332
Alignm identity: 231
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 232
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 236
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 127, 38

Conread position: 36-364
Cow position:
Alignm length: 336
Alignm identity: 234
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 127, 38

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 232
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 124, 38

Conread position: 36-364
Cow position:
Alignm length: 336
Alignm identity: 238
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 127, 38

Conread position: 36-364
Cow position:
Alignm length: 335
Alignm identity: 235
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 124, 38

Conread position: 38-338
Cow position:
Alignm length: 306
Alignm identity: 208
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 9, 44

Conread position: 44-364
Cow position:
Alignm length: 327
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 116, 14

Conread position: 54-318
Cow position:
Alignm length: 269
Alignm identity: 190
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 104, 66

Conread position: 61-362
Cow position:
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 85

Conread position: 70-294
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 120

Conread position: 70-294
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 90, 120

Conread position: 70-315
Cow position:
Alignm length: 250
Alignm identity: 166
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 129, 92

Conread position: 70-329
Cow position:
Alignm length: 263
Alignm identity: 180
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 93, 50

Conread position: 70-330
Cow position:
Alignm length: 264
Alignm identity: 183
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 90, 124

Conread position: 70-330
Cow position:
Alignm length: 264
Alignm identity: 183
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 93, 123

Conread position: 70-347
Cow position:
Alignm length: 285
Alignm identity: 199
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 84, 128

Conread position: 70-356
Cow position:
Alignm length: 292
Alignm identity: 205
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 90, 123

Conread position: 70-356
Cow position:
Alignm length: 292
Alignm identity: 197
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 93, 40

Conread position: 70-361
Cow position:
Alignm length: 295
Alignm identity: 205
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 262, 91

Conread position: 70-362
Cow position:
Alignm length: 300
Alignm identity: 194
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 36

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 90, 65

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 303
Alignm identity: 205
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 106

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 95, 120

Conread position: 70-364
Cow position:
Alignm length: 300
Alignm identity: 213
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 90, 124

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 211
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 207
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 299
Alignm identity: 213
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 82, 110

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 299
Alignm identity: 212
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 101, 89

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 206
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 90, 119

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 197
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 44

Conread position: 70-364
Cow position:
Alignm length: 307
Alignm identity: 220
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 220
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 84, 123

Conread position: 71-342
Cow position:
Alignm length: 280
Alignm identity: 184
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 15, 49

Conread position: 71-364
Cow position:
Alignm length: 300
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 119

Conread position: 72-364
Cow position:
Alignm length: 299
Alignm identity: 211
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 88, 121

Conread position: 72-364
Cow position:
Alignm length: 299
Alignm identity: 209
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 88, 121

Conread position: 72-364
Cow position:
Alignm length: 299
Alignm identity: 206
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 88, 116

Conread position: 72-364
Cow position:
Alignm length: 298
Alignm identity: 211
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 95, 87

Conread position: 72-364
Cow position:
Alignm length: 296
Alignm identity: 206
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 260, 16

Conread position: 74-330
Cow position:
Alignm length: 260
Alignm identity: 174
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 80, 45

Conread position: 74-349
Cow position:
Alignm length: 284
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 86, 22

Conread position: 76-361
Cow position:
Alignm length: 292
Alignm identity: 202
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 89, 65

Conread position: 76-364
Cow position:
Alignm length: 303
Alignm identity: 214
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 84, 117

Conread position: 76-364
Cow position:
Alignm length: 295
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 84, 119

Conread position: 77-261
Cow position:
Alignm length: 191
Alignm identity: 149
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 6, 115

Conread position: 77-364
Cow position:
Alignm length: 294
Alignm identity: 199
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 88, 113

Conread position: 78-331
Cow position:
Alignm length: 258
Alignm identity: 175
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 85, 46

Conread position: 79-325
Cow position:
Alignm length: 251
Alignm identity: 183
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 81, 111

Conread position: 79-361
Cow position:
Alignm length: 289
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 141

Conread position: 83-361
Cow position:
Alignm length: 285
Alignm identity: 199
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 77, 106

Conread position: 83-364
Cow position:
Alignm length: 292
Alignm identity: 199
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 42, 111

Conread position: 84-352
Cow position:
Alignm length: 272
Alignm identity: 194
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 250, 57

Conread position: 85-364
Cow position:
Alignm length: 287
Alignm identity: 190
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 17

Conread position: 86-347
Cow position:
Alignm length: 266
Alignm identity: 188
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 71, 81

Conread position: 86-355
Cow position:
Alignm length: 277
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 130

Conread position: 86-364
Cow position:
Alignm length: 290
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 115

Conread position: 89-364
Cow position:
Alignm length: 284
Alignm identity: 181
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 133

Conread position: 90-255
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 82

Conread position: 90-364
Cow position:
Alignm length: 285
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 108

Conread position: 91-327
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 112

Conread position: 95-356
Cow position:
Alignm length: 272
Alignm identity: 189
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 27, 95

Conread position: 108-356
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 52, 153

Conread position: 158-352
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 59, 41

Conread position: 166-362
Cow position:
Alignm length: 201
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 161, 56

Conread position: 170-364
Cow position:
Alignm length: 198
Alignm identity: 115
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 164, 0

Conread position: 172-364
Cow position:
Alignm length: 197
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 15

Conread position: 181-363
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 45

Conread position: 216-356
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 221-357
Cow position:
Alignm length: 140
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 222-356
Cow position:
Alignm length: 138
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 222-364
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 108, 0

Show alignments to all cow chromosomes.