Cow genome map

Conread name: rmga38_o5.y1

Conread position: 1-364
Cow position:
Alignm length: 374
Alignm identity: 255
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 81, 44

Conread position: 3-150
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 3-184
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 156, 38

Conread position: 3-184
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 157, 38

Conread position: 3-203
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 156, 37

Conread position: 3-234
Cow position:
Alignm length: 239
Alignm identity: 179
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 67, 38

Conread position: 3-270
Cow position:
Alignm length: 273
Alignm identity: 193
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 99, 42

Conread position: 3-305
Cow position:
Alignm length: 307
Alignm identity: 218
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 112, 32

Conread position: 3-329
Cow position:
Alignm length: 331
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 29

Conread position: 3-347
Cow position:
Alignm length: 352
Alignm identity: 242
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 157, 43

Conread position: 3-350
Cow position:
Alignm length: 354
Alignm identity: 244
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 151, 38

Conread position: 3-356
Cow position:
Alignm length: 359
Alignm identity: 247
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 157, 38

Conread position: 3-362
Cow position:
Alignm length: 366
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 38

Conread position: 3-364
Cow position:
Alignm length: 369
Alignm identity: 253
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 150, 38

Conread position: 3-364
Cow position:
Alignm length: 369
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 34

Conread position: 3-364
Cow position:
Alignm length: 370
Alignm identity: 263
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 157, 38

Conread position: 3-364
Cow position:
Alignm length: 370
Alignm identity: 259
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 160, 30

Conread position: 3-364
Cow position:
Alignm length: 379
Alignm identity: 263
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 56, 37

Conread position: 3-364
Cow position:
Alignm length: 377
Alignm identity: 259
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 28

Conread position: 4-270
Cow position:
Alignm length: 270
Alignm identity: 191
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 150, 28

Conread position: 5-158
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 5-200
Cow position:
Alignm length: 199
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 149, 36

Conread position: 5-279
Cow position:
Alignm length: 279
Alignm identity: 194
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 148, 36

Conread position: 5-361
Cow position:
Alignm length: 367
Alignm identity: 257
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 139, 35

Conread position: 5-364
Cow position:
Alignm length: 366
Alignm identity: 260
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 154, 27

Conread position: 6-364
Cow position:
Alignm length: 362
Alignm identity: 244
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 97, 35

Conread position: 12-292
Cow position:
Alignm length: 285
Alignm identity: 201
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 148, 29

Conread position: 12-364
Cow position:
Alignm length: 357
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 18

Conread position: 21-364
Cow position:
Alignm length: 353
Alignm identity: 227
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 20

Conread position: 27-364
Cow position:
Alignm length: 345
Alignm identity: 242
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 92, 14

Conread position: 29-299
Cow position:
Alignm length: 274
Alignm identity: 187
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 131, 36

Conread position: 30-364
Cow position:
Alignm length: 343
Alignm identity: 245
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 8, 48

Conread position: 31-364
Cow position:
Alignm length: 340
Alignm identity: 235
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 129, 43

Conread position: 34-364
Cow position:
Alignm length: 337
Alignm identity: 236
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 129, 40

Conread position: 36-364
Cow position:
Alignm length: 338
Alignm identity: 224
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 60, 51

Conread position: 37-364
Cow position:
Alignm length: 334
Alignm identity: 238
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 123, 37

Conread position: 44-356
Cow position:
Alignm length: 317
Alignm identity: 218
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 38, 5

Conread position: 68-364
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 92, 126

Conread position: 69-357
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 92, 55

Conread position: 69-364
Cow position:
Alignm length: 302
Alignm identity: 212
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 91, 124

Conread position: 70-296
Cow position:
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 122

Conread position: 70-334
Cow position:
Alignm length: 268
Alignm identity: 177
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 89, 124

Conread position: 70-356
Cow position:
Alignm length: 292
Alignm identity: 193
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 90, 120

Conread position: 70-356
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 90, 120

Conread position: 70-356
Cow position:
Alignm length: 293
Alignm identity: 210
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 90, 118

Conread position: 70-362
Cow position:
Alignm length: 299
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 49

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 202
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 99, 118

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 91, 123

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 127

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 84, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 90, 126

Conread position: 70-364
Cow position:
Alignm length: 306
Alignm identity: 212
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 75, 123

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 90, 114

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 209
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 201
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 84, 17

Conread position: 70-364
Cow position:
Alignm length: 302
Alignm identity: 221
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 95, 89

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 93, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 207
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 90, 54

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 218
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 217
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 90, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 213
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 93, 123

Conread position: 70-364
Cow position:
Alignm length: 300
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 93, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 210
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 93, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 216
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 94, 123

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 214
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 90, 120

Conread position: 70-364
Cow position:
Alignm length: 301
Alignm identity: 217
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 90, 123

Conread position: 71-364
Cow position:
Alignm length: 303
Alignm identity: 214
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 81, 114

Conread position: 72-352
Cow position:
Alignm length: 287
Alignm identity: 198
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 88, 124

Conread position: 72-362
Cow position:
Alignm length: 299
Alignm identity: 194
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 50

Conread position: 72-364
Cow position:
Alignm length: 303
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 88, 122

Conread position: 72-364
Cow position:
Alignm length: 299
Alignm identity: 212
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 88, 11

Conread position: 76-304
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 77, 42

Conread position: 76-330
Cow position:
Alignm length: 258
Alignm identity: 183
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 81, 108

Conread position: 76-352
Cow position:
Alignm length: 284
Alignm identity: 192
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 84, 91

Conread position: 76-356
Cow position:
Alignm length: 285
Alignm identity: 198
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 84, 114

Conread position: 76-361
Cow position:
Alignm length: 294
Alignm identity: 212
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 87, 68

Conread position: 76-364
Cow position:
Alignm length: 297
Alignm identity: 217
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 84, 28

Conread position: 76-364
Cow position:
Alignm length: 295
Alignm identity: 208
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 84, 65

Conread position: 78-361
Cow position:
Alignm length: 290
Alignm identity: 197
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 112

Conread position: 79-270
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 40

Conread position: 80-363
Cow position:
Alignm length: 290
Alignm identity: 188
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 113

Conread position: 81-358
Cow position:
Alignm length: 284
Alignm identity: 195
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 79, 101

Conread position: 81-364
Cow position:
Alignm length: 292
Alignm identity: 208
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 80, 112

Conread position: 81-364
Cow position:
Alignm length: 290
Alignm identity: 205
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 79, 114

Conread position: 83-364
Cow position:
Alignm length: 287
Alignm identity: 200
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 73, 16

Conread position: 85-364
Cow position:
Alignm length: 286
Alignm identity: 189
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 13

Conread position: 86-364
Cow position:
Alignm length: 285
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 181, 105

Conread position: 88-364
Cow position:
Alignm length: 281
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 135, 73

Conread position: 89-315
Cow position:
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 82, 75

Conread position: 89-327
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 18

Conread position: 89-364
Cow position:
Alignm length: 281
Alignm identity: 186
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 71, 110

Conread position: 89-364
Cow position:
Alignm length: 285
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 90-364
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 70, 103

Conread position: 90-364
Cow position:
Alignm length: 281
Alignm identity: 191
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 70, 103

Conread position: 91-304
Cow position:
Alignm length: 215
Alignm identity: 151
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 132, 70

Conread position: 91-364
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 99

Conread position: 93-364
Cow position:
Alignm length: 277
Alignm identity: 197
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 70, 102

Conread position: 93-364
Cow position:
Alignm length: 278
Alignm identity: 197
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 67, 100

Conread position: 93-364
Cow position:
Alignm length: 281
Alignm identity: 196
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 70, 103

Conread position: 94-348
Cow position:
Alignm length: 263
Alignm identity: 194
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 104

Conread position: 95-318
Cow position:
Alignm length: 227
Alignm identity: 158
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 59, 122

Conread position: 107-364
Cow position:
Alignm length: 264
Alignm identity: 184
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 54, 87

Conread position: 121-352
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 39, 94

Conread position: 121-354
Cow position:
Alignm length: 241
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 40, 97

Conread position: 145-363
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 54

Conread position: 149-354
Cow position:
Alignm length: 213
Alignm identity: 147
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 27

Conread position: 196-364
Cow position:
Alignm length: 173
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 205-356
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 18, 51

Conread position: 206-364
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 216-361
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 217-364
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 222-364
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 108, 0

Conread position: 222-364
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 112, 131

Conread position: 222-364
Cow position:
Alignm length: 146
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 0

Conread position: 223-351
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 111, 0

Show alignments to all cow chromosomes.